Oncorhynchus tshawytscha (Chinook salmon): 112246624
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Entry
112246624 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112246624
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
112246624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_IFT140_1st
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WDR90_beta-prop_4th
HIRA_B
WD40_like
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
112246624
NCBI-ProteinID:
XP_042176207
LinkDB
All DBs
Position
LG04:7812396..7861378
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AA seq
1040 aa
AA seq
DB search
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVVIWNMAPVLREEDEKNVNIP
KMLCQMDNHLACVNCVRWSNTGLYLASGGDDKLVMVWKRAAFIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEIVASLKGHTGLVKGL
TWDPVGKYIASQADDHSLKVWRTMDWQQETNITKPFNECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQRNGSSPKPSCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLNGLGILVCSMDGTVAYLNFSQD
ELGDPLNEDEKNAIHQNIYGKSLAITTEAQLSTTIIENPEMLKYQQERQRAEQANHRMTH
EAQAHKLTSVVNGESLEDIRKNLLKKQVETRTADGRRRITPXCIAQLDTGDFSPALFNSV
PILPGSASQLTSQLSSDSNTATSNLDPLSTPLGGKAPDDAKDSVSGATAQASSLNTTAMK
SNLLLTTSTKMEPMKALDSRFTERSKVMPGVTISMAGLTPLDRVKDSSTLKEIKDETSSD
SEDKMVVVKSPSFTKRKVLDVDGGDNQLEKRKALDVDGGDNQVEKRKALDVDGGDNQVEK
RKKGRPRKMDAKMMMPVSHQTFQQATPSSEKEPCCVVAIPVAVLKLPTPTPQKAFTLQVS
TEPPVYLEVENDVSAVSGAKLSQLRCSREGREWDTLLPSRVITAAGSSDVVAVACEDRML
SVFSACGRRLLPAILLPAPMSALHCSGFYVMALTACATLSVWDVQKQSAVVKNESLQTIL
SGTECTVSQSLLTQQGVPVIGLSNGKSYCFNSSLETWNLIADKQDSLVQCADFKNCISSQ
DAPVSQGPLALTQGHNLNAGRLASRLSSTPHHLQHGMTLVFLENQLASALTLRSSTEYHY
WLLIYARFLVTEGSDYRLRELCKDLLGPVHKSAGSAWEPTTLGLRKRDLLRELLPVIGQN
LRFQRLFTEYQDQLELLGNK
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgaagctattgaaaccaagttgggtcagtcacaatgggaaaccaatattttctgttgac
atccatcccgatggaacaaagtttgccacgggtggccagggcgaggactccgggaaggtt
gtcatatggaatatggctccagtgctccgagaggaggacgagaagaacgtgaacatcccc
aagatgctctgccagatggacaatcacttagcctgtgtgaactgtgtccgctggtcaaac
accgggctttacctggcctctggaggtgatgacaagttggtcatggtgtggaagagagct
gccttcattggacctagtactgtctttgggtcgagcagtaaattggccaacgtggagcag
tggcgttgtgtgaccatactgagaaaccacacaggggatgtcatggatgtggcttggtcc
cctcacgacgtgtggttagcctcctgcagtgtggacaacaccattgtgatctggaatgct
cgtaaattcccagagatagtggcgtcgctgaagggacacacaggcctggtgaaggggctg
acgtgggaccctgtagggaagtacatcgcctcccaggctgacgaccacagcctgaaggtg
tggaggaccatggactggcagcaggagaccaacatcaccaagcccttcaacgagtgtggg
gggaccactcacgtgctgcgcctcagctggtctcctgacggacagtacctggtgtcggcc
cacgctatgaacaactcagggcccaccgctcagatcattgagagggacggctggaagacc
aacatggactttgtgggccaccgcaaggctgtcactgttgtgaaattcaaccccaaaatc
ttcaaaaagaaacaaaggaatgggagttctcccaagccaagctgtccctactgctgctgt
gctgtgggaagcaaagaccgctccctctccgtttggctgacctctctgaagcgccctcta
gtggtcatccacgacctgttcgataaatccatcatggacatctcatggaccctgaatggg
ctaggtatcttggtgtgctccatggacggtacagtggcatacctcaacttctctcaggac
gagctcggggaccccctcaacgaggacgagaagaacgccatccaccagaacatctatggt
aagagcctggccatcaccaccgaggcccaactctccaccaccatcatcgagaacccggag
atgctcaagtaccagcaggagaggcagcgtgcggagcaggccaaccacaggatgacccac
gaggcccaggcccacaaactcaccagcgtcgtcaacggagagtccctggaggacatccgc
aagaacctgttgaagaaacaggttgagacgaggaccgcggacggcaggaggaggattact
cctnnctgcatcgcccagctcgacacaggggatttctccccagccctcttcaacagcgta
cccatcctccctgggtcggccagccagctcacctcccagctttcctcagactccaacacg
gccacctccaatttggaccccctatccaccccactggggggcaaggccccagatgacgcc
aaagacagtgtttccggtgccacggcccaggcctcgtctcttaacaccacagccatgaag
tccaacctgctcctaaccacctccaccaagatggagccgatgaaagcccttgactccagg
ttcacagagaggtcaaaggtcatgcccggggtcaccatctccatggcgggactcaccccg
ctagacagagtgaaagacagcagcactttaaaggagatcaaggatgagacgagcagcgac
agcgaggacaagatggttgtggtgaagtccccctccttcaccaagaggaaggtcctcgac
gtggacggaggggacaaccagttggagaagaggaaggccctagacgtggacggaggggac
aaccaggtggagaagcggaaggccctagacgtggacggaggggacaaccaggtagagaag
aggaaaaagggacggcccaggaaaatggacgcgaaaatgatgatgcccgtgtcccaccaa
accttccagcaggctaccccttcatcagagaaggagccttgttgcgtcgttgctatcccc
gtggctgtcctcaaactgcccactcccacaccgcagaaagcgtttactcttcaggtcagt
acggagcccccggtgtacctggaggtggagaacgacgtctctgcggtgtccggagccaaa
ctcagccagctccgctgttccagggagggcagggagtgggacacgttgctgcccagccga
gtcatcactgcagcgggcagcagtgatgtggtggcagtggcgtgcgaggaccgcatgttg
tctgtgttttcggcgtgtggccgccgcctactacccgccatcctgctgcccgcgcccatg
tctgccctgcactgctcaggcttctacgtcatggccttgaccgcctgcgccaccctgtct
gtctgggatgtccaaaaacagagtgccgtggtgaagaatgaatctttgcagaccatttta
tcaggcacagaatgcactgtgtcccagtctttactgacacagcagggggtcccagtcatt
ggtctctccaatgggaagtcctactgcttcaactcctccctggagacatggaacctaata
gcagataaacaggactccctggtgcagtgtgccgacttcaagaactgcatctcctcccag
gatgcacccgtgtcacagggacccctggctctcacacagggacacaacctcaatgcgggt
cgcctggcctccagactgtcgtccaccccacaccacctgcagcatggcatgaccctggtt
ttcctggagaaccagctggcctcagccctcaccctgcgctccagcacagagtaccactac
tggctgctcatctatgcacgcttcctggtcactgagggctctgattatcggctacgtgag
ctctgtaaagacttactgggaccagtgcacaagtctgccggcagtgcctgggagccgaca
accctgggcctgcggaagagggacctcttgagagagctgctgcctgtcataggacagaat
ttgcgtttccagaggctcttcacagagtaccaggaccagctggagctgctcggcaacaaa
tag
DBGET
integrated database retrieval system
