Oncorhynchus tshawytscha (Chinook salmon): 112246668
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Entry
112246668 CDS
T05605
Symbol
spef2
Name
(RefSeq) sperm flagellar protein 2 isoform X1
KO
K25615
sperm flagellar protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112246668 (spef2)
Cilium and associated proteins [BR:
otw03037
]
Motile cilia and associated proteins
Sperm associated proteins
112246668 (spef2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPEF2_C
SPEF2_D5
CH_2
ADK
AAA_17
Motif
Other DBs
NCBI-GeneID:
112246668
NCBI-ProteinID:
XP_042176210
LinkDB
All DBs
Position
LG04:8815600..8863430
Genome browser
AA seq
1794 aa
AA seq
DB search
MSDILCRWLNVELRLSKTVDPRSISKDFANGYLIGEVLHKYQLQGDFDLFLKSNTANSKL
NNFTLMEPTLQLLGVSLDLSMAQAVMREQHGAATRLLYQLFILLQKKRKAGLTGTAMEAM
QPAATAFLHRVENDIYSERLRTVVKREADLKLQKIALKYEIKGREIYDKSVMAHFVEEQR
RQKVQEEMRLQDIEKHRHARRKQHEMMTRIQTAVIQIPKPPPNRTLKALEKQQQNRKKQE
AQKVHMEIAQFEKNRKKLSPAGGFGTSSLSAQHMSAFHSEAPRSHGSQLQRPEELAQANS
EYIQKIRQRLEEDATARQQREKRRRHVLVEQLKAHEAQEEALREEQLVERLTRQSQLERR
LAVQLMQLRQQKDVLRQNRVFRERQYQEQRLRDFQEALEREAALARQASLDHAEDTRKEI
EVHDRIATERAQARYRKHSDSCREILEQIVDLATKAGEYRLLTGNLIPGKLMREWKELMF
CGKPLYDSGSLEELPADPTPEQFIEVEKQEILNNQDYDEYMSMTGEWTWPEEGETKPPPS
NNNILGHVVLRLQTIVNPPKPDTLPPFFPRFTLKACVLGKLFSGKTTCLTRIAKVHHIHI
LSANVLIQEALAAHQLGKLGRESPESCETLATKDIDQVEMDTQMEEESSQGSGPLAQEPQ
QQGAKKKPKLSVRAQHGAAVEKFLRKGRSVPDELLVDIAVEAIRAIPADSGWILDGFPVD
LTQAKLLEKALGGSDTGKERKRRNKRSNLSVDSNAPKEPPPPSPVLDLALLLDVSDDHVL
DRAAKQAYEEESSDLVGAGEESCAPAREHNVVIARDKSLEKRQIQHRITAFQDTWPKLEK
WFSGKQSILMRLNAEMSEDMLFRKVESILYQAMMQSEKGEGVVLDSGKAPAVSTALVQVT
PVAVPAPTESTSTLTQEGLTPPVKCSSSKSNSRSPKGSQSNIEKNTSEGKDVHLKLSKSG
SGGAVGHSRTLSIASSFENSHGVTTSPTEPLAPTPGTTHWVYVDEPLPKEIPEYLVPYWE
NVCNSYVTNVKAVMQNLRTERILIIHHLFNIREEFKQYLRRPDLKQEFVSQWQQNYNSIP
KDMRDDEETKAELHQRLDDLRERLWDICDKRKEEAGQERAAIMCDGWLEDHTAVLINHFS
TLIQVEVDRFQDSLRLLRDYYTGMYKQVLSEAAPEFTCIPLLDIVALEEPGNQTDKSKSS
ERVTKSAGKRDCEGDEKKKTKVVPLIPRRPPSTEVASMKQKGFQDPDEKLLHDIYQTALT
AINNMVSVEAAQREAEENEEAQQQMDRERLQRMSQASASAAAAAANSGKDKKKAGTKKKG
PPSPAQEPSPPPAPEEDSEEVCKRAIRNKIRQEYAAALDHEDSAVKVRVELVKACALCMV
RVLHRQAEQAFRTMEEWLGARFLSEMNSIDQLAEVVRHHIESAAKLQSELMLVCTDFFLN
GDVRVVVSPPNPPRPAPLELPTDSTLTILQLEAFYRQLRKVAPTGVQCSTDFWEILQEIT
SLNMGTNALPDPWMHISESQLVELVSMLTQNTEMLDWRQFLLSAALPWPTPTLPQLLQVL
ARFKMEDTGATGSLTEEQYLKVELWFPSERALPIPEDLSEPLPYDRLANLRKFFFLLFAD
PDCSPARVDYVTMLLYFAAHPDPTQGFVRALSVVMGQPLRHQSSSRLLKSVPYMEEGLSE
STELEEEVEPQGGPRGEEGVSIPALLRAICHGGAWGACQNRFHPNWKTPDEYKEDFVKVY
RELGYKVEDKIPFSILSQHPVIQDLIEGSAQYQLIDIHRALQVQQSEGEPLMVS
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatatattatgcaggtggcttaacgtagagctccggctatcaaaaactgttgac
cccaggtccatctctaaggattttgcaaatggctatcttattggagaggtcctgcataaa
tatcaactgcagggggattttgacctgttcttaaagagcaacactgcaaactcaaagctg
aataacttcacactcatggaacccacattgcaactgctcggagtttccttggacctgagc
atggcccaagctgtgatgcgggagcagcacggtgcagccacacggctgctttatcagctc
ttcatactgctgcagaagaagagaaaagccggcctgacaggcacagctatggaggctatg
cagccagctgccacagcttttctccaccgtgttgagaatgacatctactctgagcgcctg
aggacagtcgtcaagagagaggctgatctgaaactccaaaaaatcgctctgaagtacgaa
atcaaaggtcgagagatatatgacaagtctgtcatggcccactttgtggaggagcagaga
cggcagaaagtgcaggaagagatgagactccaggacattgaaaagcaccgacacgcacgc
agaaagcagcatgagatgatgactcgaattcagaccgccgtcatccaaattcccaaaccc
ccgcccaaccggacattgaaggccctggaaaaacaacaacagaaccggaagaagcaggag
gctcagaaggttcacatggaaatcgcccagtttgagaagaacaggaagaagttgtcacct
gctggcggctttggcacctcttctttgagtgcccagcacatgtccgctttccacagtgag
gcccccagaagccatggctcccagttgcagaggcctgaggagctggctcaggccaacagc
gagtatatccagaaaatccgccagaggctggaggaggatgcaacagctcgtcagcagagg
gagaaacgccgccgtcacgtcctagtggaacaattgaaagcccacgaggcccaagaggag
gcccttcgagaggagcagctggtggagcgtctgacccgtcagtcccagctggagagacgc
ctggccgtccagctcatgcagctccgccagcagaaggatgttctccgacagaaccgagtg
ttccgcgagagacagtaccaagagcaacggctgagggatttccaagaggccttggagagg
gaggcggctctagcacgccaggccagtttggatcacgccgaggacactcggaaggagatt
gaggtacatgacaggatagcgacggagcgcgcccaggctcgctacaggaagcactctgac
agctgcagagaaatactggagcagatagtggacctggccacgaaagctggagagtaccgc
ctcctcactggaaatcttatccctgggaagttgatgcgggaatggaaggagctcatgttt
tgcgggaagcccctgtatgacagtggcagtctggaggagctacctgccgaccccacccca
gagcagttcattgaggttgagaaacaggagatccttaacaaccaggactatgatgagtat
atgagcatgactggtgagtggacctggccagaggagggggagaccaagccccccccatcc
aacaacaatatcctgggacatgtggtgctccgcctgcagactattgtgaacccccccaaa
ccagacacccttcctcccttctttcctcggttcacactgaaagcctgtgtgctagggaag
cttttttccgggaagaccacatgcttaaccaggattgccaaagtccatcacatccacatc
ctgtcagctaatgttctgatccaggaggccctggctgcacatcagcttggaaagcttgga
cgtgagagcccagagagctgtgaaacattggccactaaagacatcgaccaggtggagatg
gatactcagatggaggaggagtcgtcacagggttcaggcccactcgctcaggagcctcag
cagcaaggagccaagaaaaaacccaagctctctgtgagggcccagcatggagcagcagtg
gaaaagtttctcagaaaagggagatccgtcccagacgagctccttgtggacattgcagtc
gaagctatcagggcaatcccagcagactccggctggattctggacggcttcccggtcgat
ctgacccaggccaagcttctggagaaggccctggggggctcggacactgggaaggagagg
aagagaaggaacaagcggtccaacctgtctgtggatagcaacgcgcctaaggagccccct
cctccctctcctgtgctggacctagctctgctgcttgacgtgtctgatgaccacgttttg
gacagggcggccaagcaggcctatgaggaggagagctctgacctggtcggggctggtgag
gagagctgtgcccctgctagagagcacaatgttgtcatcgccagggacaagagcctggag
aagagacagatccagcacaggatcacagccttccaggatacctggcccaagctggagaag
tggttctctggtaaacagagcattctgatgagattgaatgctgagatgtcggaggacatg
ctctttagaaaagtggaatctatcctgtaccaggccatgatgcagtcggaaaaaggtgag
ggagttgttttggacagtgggaaggcaccagcggtctcaactgctctcgtccaggtaact
ccggttgcggtcccagctcccactgagtccacctccaccctcacccaggagggcctgact
ccacctgtgaaatgctccagctccaagtccaactctcgctcccccaaaggttcacagagc
aacattgagaagaacacatccgaagggaaagatgtccatcttaagctgtccaagtcagga
tcaggaggagccgtggggcattctagaacgttgtccatagcctcctcctttgagaattcc
catggtgtgaccaccagccctacagagcccctagctcccacccctggtactacacactgg
gtgtatgtggacgagccccttcccaaggagataccagagtacctggttccatactgggag
aatgtgtgtaactcctatgtgactaacgtcaaggctgtgatgcagaacctccgcacagaa
cgcatcttgatcattcaccatctgtttaacatcagagaggagtttaagcagtacctccga
cggcccgacctgaagcaagagtttgtgtcccagtggcagcagaactataacagcatcccc
aaggacatgagagatgacgaggagaccaaggcagagctgcaccagcgtctggatgacctg
cgcgagcgtctgtgggacatctgtgataagcgtaaggaagaagcggggcaggagcgggcg
gcgatcatgtgcgacggctggctggaagaccacacggcggtgctcatcaaccatttctcc
acactaatacaggtggaagtggaccgattccaggactctctacgtctcctgcgggattac
tacacaggcatgtacaaacaggtgctgtctgaggcggcgccagaattcacctgtattcca
ctgctagacatcgtggcgctggaggagccaggaaaccagactgacaaatccaagagttct
gaaagagtcaccaagagtgctggtaaaagagactgtgaaggagacgagaagaagaaaacc
aaagttgttccactgattccccgcagacctccctctaccgaagtggcctctatgaaacag
aaaggcttccaggaccccgacgagaagctgctgcatgacatctatcagactgctctgaca
gccatcaacaacatggtgtcagtggaggcggctcaacgcgaggcagaggagaatgaggag
gctcagcagcagatggatagagaacggctacagagaatgtcccaagcctccgcctccgct
gcagccgccgcagccaactctggcaaggacaagaagaaagctggcaccaagaagaaaggc
cccccctcccctgctcaggagcccagcccaccccctgccccagaggaagattcagaggag
gtctgcaagagggccatacggaacaaaatcagacaggagtatgctgcagctctcgaccat
gaagacagtgcagtgaaggtgcgtgtggagctggtcaaggcctgtgctctgtgcatggtg
agggtcctgcacagacaggcagagcaggccttcaggaccatggaggagtggctgggagcc
cgattcctgtctgagatgaacagcattgaccagctggctgaggtggtgcgtcaccacatc
gagtcggctgccaagctccagagtgagctgatgctggtatgcacagacttcttcctgaac
ggggacgtgcgggttgttgtcagtccccctaaccctccccgccccgcccctttggagctt
cccacagacagcactctcaccatccttcagttggaggccttctaccgccagctacgcaag
gtggcgcccacaggtgtgcagtgcagtactgacttctgggagatcctgcaggagatcacc
tctctgaacatggggaccaacgcactgccagacccctggatgcacatctcagagtctcag
ctggtggagctggtgtcaatgctaacccagaacacagagatgctggactggcgtcagttc
ctgctgagtgccgccctcccctggcccacccctactctgcctcagctgctgcaagtgttg
gcccgcttcaagatggaggacactggggccacagggtctttgactgaggagcagtactta
aaggttgagttgtggttccccagtgagcgggcactgcccattcccgaagacctgtctgag
ccacttccttacgatcgcttggctaatctacggaagtttttcttcctgcttttcgccgac
cccgattgctcgccagctcgtgtcgactacgtgaccatgctgctgtacttcgccgcccac
cctgaccctacgcagggctttgtccgagctctcagtgtcgtcatgggacagccgcttcga
catcagtctagcagtagacttctcaagtcggtgccttacatggaggaggggctgagtgag
tcgaccgagctagaggaggaggtggagcctcagggggggccaagaggggaggagggggtg
tccatccctgccctcctccgagctatctgtcacgggggagcctggggggcatgccagaac
cgctttcatcccaactggaagactcctgatgaatataaagaggactttgtgaaggtctac
agggaactggggtacaaggttgaggacaagattccattctccatcctatcccagcatccg
gtcatacaagatctgatcgagggctccgctcaataccaactcattgatattcaccgagct
ctgcaggtccaacagagcgaaggggagcctttgatggtgtcttaa
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integrated database retrieval system
