Oncorhynchus tshawytscha (Chinook salmon): 112246797
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Entry
112246797 CDS
T05605
Name
(RefSeq) estrogen receptor beta-like
KO
K08551
estrogen receptor beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
112246797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112246797
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112246797
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
112246797
Nuclear receptors [BR:
otw03310
]
3. Estrogen like
3A. Estrogen receptor
112246797
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GFIT
Motif
Pfam:
zf-C4
ERbeta_N
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
112246797
NCBI-ProteinID:
XP_042181309
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Position
LG08:26195191..26225750
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AA seq
557 aa
AA seq
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MACFPGSGTDTSPLLQVQKVGSNKAPGLLPPIYSPLSGMESSSLCIPSSHTGSSHDYSPV
AFYNHSTLGYSRPTISDSYSLCPPLSPHHFWPPTDHGQHNMPLLTEHCSQPLLYSNPKHH
APFEEPKPHNLNLTPSSPLLHPTKLPGENFCAICNEYSLGYHYSVQSCEGCKAFFKRSIQ
GHKDYICPGTNQCTIDKNLRKMCRSCRLRKCYEVGMKKCGMRPERYSYMGARHRRVPQGR
GAPGGLVGVGARAQWNLEGGSLPLLEVHHSSLTPEQLISCIMDVEPPEIYLMEDLKRPFT
EASMMMSLIKLANKELFLMISWAKKIPGETPVLMAHQWELWQEGLLLGLMGTGLDKSMRC
LFSLNLRFNREEGNCVEGIMIIFDMLLAATTRFRELNLQREEYVCLKVMILLNSNICSTS
PEMAEDLESKGKLQLLLDSVTDALVWAISKQGLSFQLQSTRLSHLLMLLSDICHVSGKGI
NHLSGMKNNNIVQVSDLLLEMLTNTCHRSHMSAPLDPSNHDLTVLPAAQAPAPTQASASA
VEPPVPATFPIATIPNT
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcctgttttcctgggagtgggactgacacttctcccctgctccaggtccagaaggtg
ggctccaacaaggcccctggactcctgccccccatttacagccccctcagtggcatggag
agctccagcctctgcatcccctcttcccacacaggcagcagccatgattacagccctgta
gccttctacaaccactctacgctgggctacagcagaccaaccatctctgacagctactct
ctgtgtcccccactcagtccccaccacttctggccccccactgaccacggccagcacaac
atgcccctgctgaccgagcactgttcccaacccttgctgtacagcaatcccaaacaccac
gccccctttgaagagcctaaaccccacaacctcaacctcacccctagcagccctctcctc
caccctaccaagctgccgggggaaaacttctgtgccatatgtaatgaatactctttgggc
taccattatagcgtacagtcttgtgagggctgcaaggccttcttcaagaggagcatccaa
gggcacaaggactacatttgtccagggactaaccagtgcactatcgacaagaacctccgt
aaaatgtgccggtcctgccgcctacgcaagtgttatgaagtgggcatgaagaagtgcggg
atgaggccggagcgctacagttacatgggggcgaggcacaggcgtgtgcctcaggggcgg
ggggcaccaggcgggctggtgggggtcggtgccagggcccagtggaatctggaggggggc
tccctccccctgctggaggtgcaccactcatccctgacccctgaacagctgatatcctgc
atcatggatgtggagccgccagagatctacctgatggaggacctaaagaggcctttcact
gaagccagcatgatgatgtcactcatcaaactggccaacaaggagctgttcctcatgatc
agctgggccaaaaagatccctggtgagacacctgttctgatggcacatcaatgggagctg
tggcaagaaggtttgctgttaggcctcatggggactggtcttgataaatcaatgagatgt
ttattttcactgaatctccgttttaacagggaagaggggaactgtgtggagggaatcatg
attatatttgacatgctactggcagccaccactcggtttcgagagctgaacctccagaga
gaggagtatgtctgtctgaaagtcatgatcctcctcaactccaacatatgctctacctct
ccggagatggcagaggatctggagagcaaggggaagctgcagcttctgttggactcagtg
acagatgccctggtgtgggccatctccaaacaaggcctgtccttccagctgcagtcaacc
cgcctttcccacctcctcatgttgctctcagacatctgtcacgtcagtggcaaaggcata
aaccacctctccggcatgaagaataacaatattgtgcaggtctccgacctgctcttggaa
atgctcaccaacacatgccacagaagccatatgtccgcacctcttgacccctctaatcac
gacctcaccgtgctcccagcagcccaagcccctgcccctacccaggcttcagcctctgct
gtggaacccccagttccagccacattccctatagccaccatcccaaacacttga
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