Oncorhynchus tshawytscha (Chinook salmon): 112246838
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Entry
112246838 CDS
T05605
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112246838
04082 Neuroactive ligand signaling
112246838
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112246838
Ion channels [BR:
otw04040
]
Ligand-gated channels
GABA-A
112246838
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
112246838
NCBI-ProteinID:
XP_024271168
UniProt:
A0A8C8MM18
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Position
LG08:25000791..25023335
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AA seq
457 aa
AA seq
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MRERWDLSHYLAVFFSLMVLWQSRSIVESSAYASEAFKNNITLFTRILDRLLDGYDNRLR
PGLGDRVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQSWIDERLKFNGPMNILRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMEDGTLLYTMRLTVQAECPMHLEDFPMDSH
SCPLKFGSYAYTMAEVTYIWTRNASASVEVAPDGSRLNQYRLQGQTVGTETIKSSTGEYT
VMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNVKQKKEA
SAMKKNNAYAVAVANYAPNVTKDQSGLPTISKSATSDTNKAKPEVKPEQNKKTFNSVSKI
DRMSRIMFPVLFGGFNLVYWATYLNREPVIKDMVPSK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagagagcgatgggatttatcgcattatctagcggtgttcttctcgttgatggtactg
tggcagtcaagatcaatagtggaatcgtctgcatatgcttcagaggccttcaaaaacaac
atcactctgttcacccggatcttggaccgccttctggatggctatgacaaccgattacga
cctggacttggagatcgggtgacggaggtgaagacggatatttatgtcacaagtttcggt
ccagtgtcagacacagacatggagtacactgtggacgtgttcttccgtcagagctggatt
gacgagcggctgaagttcaacgggcccatgaacatcctgcggctgaacaatctgatggcc
agtaagatctggacgcccgacacctttttccacaacgggaagaaatctgtggctcacaac
atgaccatgcccaacaaactgctccggatcatggaggatggaacactgctgtacaccatg
aggttaacggtccaggcagaatgtcccatgcacctcgaagatttccccatggattcccac
tcctgtccactgaagtttggcagctatgcctacacaatggccgaggtgacgtacatttgg
acccgaaacgcatcagcatcagtggaggtagcaccagatggatccagactgaaccagtat
cgccttcagggacaaactgtggggacagagaccattaaatcaagcactggtgaatacact
gtcatgacggcccacttccacctgaagaggaagattggctactttgtgatccagacctac
ctgccctgcatcatgaccgtcatcctctcccaggtctccttctggctcaaccgagagtct
gtacccgccagaactgtctttggtgtgaccactgtgctcactatgacgactctcagtatc
agtgcccgtaactctctgccgaaggtggcctacgccacggccatggattggttcattgcc
gtgtgctacgccttcgtgttctctgccctcatcgagtttgctaccgtcaactacttcacc
aaaagaggctgggcctgggatggcaaaagtgtggtgaacgtcaagcagaagaaggaggcg
tccgccatgaagaagaacaacgcctatgctgttgctgtggcaaactatgccccaaacgtc
accaaggaccaaagtggtctgcccaccatctccaagagcgccacctctgacaccaacaag
gccaagccagaggtcaagccagagcagaacaagaagaccttcaacagcgtcagcaaaatc
gaccgtatgtcccggattatgttccccgtgctcttcggtggtttcaacctggtctactgg
gccacctacctgaacagagaaccagtcataaaggacatggtcccgtccaaatga
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