Oncorhynchus tshawytscha (Chinook salmon): 112246901
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Entry
112246901 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1 isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112246901
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112246901
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112246901
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-RING_16
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
112246901
NCBI-ProteinID:
XP_024271270
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All DBs
Position
LG30:21735950..21742646
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AA seq
428 aa
AA seq
DB search
MCLQSTYLVKSDSKRTLKSRVSPTVMQPNSSELGVHQAGHGLSLTLLTRTPAGTTGGSAV
PETSGAVRVPILSSGSWESCRGGASSRRSRASSRTSSHSHSHSHGGGHQHSHSEPSEVDP
ADADLESGEPNTSFLELRYLFRWVQKSLPFIIILCAKLVIQHALGLAVGVGLFTTFLYVN
KNIQTQVFLQDRRSKMECVWLLLFLASSTLLLYYTFLTETLYYCLIFLNPAVEPLGFWEV
LWVVGITNFTLKFLIMGFKCLILLLPSSLVTYRAQGRWYMLTEEVGQVYQAVAPTPLWFR
YLVTYQKVDGNTGLTLGVLLALVYFILKLLGLYGQWGSFQKTVRIFLSGEHTGAAATRSQ
CSEAGDICPICQAEYRDPRALLCQHIFCDECIALWFNREKMCPLCCTAITDKVHKWRDGA
TSPYLQIY
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttacagtcgacttacttggtgaagagtgattccaaaagaacgttgaaatcgagg
gtatccccaactgtgatgcagcctaactccagtgagctgggtgtccatcaggcaggacat
ggtttgtctctgacgctactgaccaggacaccagcagggactacagggggctctgctgtc
ccggagactagtggagcggtccgggtacctatcctctccagcgggtcctgggagtcatgt
agaggaggggcgtcatcccgtaggtccagagccagttccagaaccagttcccacagccac
tctcattcacatggtgggggacaccagcactcccacagtgagcccagtgaggtggacccg
gctgatgctgatctggagtcaggggagcccaacacttcattcttggagctgcgctacctc
ttccgctgggttcagaagagtcttcctttcataatcatcctttgtgctaaactggtcatc
caacatgccctaggtctagctgttggagttggcttatttacaacttttctttatgtgaat
aagaacattcaaacccaagtctttcttcaggatcgtcggtcaaagatggagtgcgtatgg
ctgctcctcttcctggcgtcctccacactcctgctttactacacttttctcactgagaca
ctttactattgcctcatcttcctaaacccagctgttgagcccctaggtttctgggaggtc
ctatgggtggtgggcatcaccaacttcacactcaagttcctcatcatggggtttaagtgc
cttatcctactgctgccctctagcctggtgacctacagagcccagggacggtggtacatg
ctgactgaagaggtgggccaggtgtaccaggctgtggctcccacccccctatggttccgc
tacctggtcacctaccagaaagtggatggaaatactggcctcaccctgggagttctgctg
gctttggtctacttcatactcaagcttttaggattgtatggacagtgggggtctttccag
aaaactgtgaggatatttctcagtggtgagcacacgggggcagcagccaccaggagccag
tgcagtgaggctggggacatctgtcctatctgtcaggcagaatacagagacccaagggcc
ctcctgtgtcagcacattttttgtgacgagtgcattgctctctggttcaaccgggagaag
atgtgtccactctgctgcacggccatcacagacaaggtccacaagtggagggacggggcc
acgtcaccttacctccaaatctactga
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integrated database retrieval system
