Oncorhynchus tshawytscha (Chinook salmon): 112246971
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Entry
112246971 CDS
T05605
Name
(RefSeq) nucleolar protein 6-like
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112246971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otw03009
]
112246971
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112246971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D2
Nrap
Nrap_D3
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
112246971
NCBI-ProteinID:
XP_042176280
LinkDB
All DBs
Position
LG04:12944435..12971196
Genome browser
AA seq
1153 aa
AA seq
DB search
MEIKRLPIEQPVNKLKMKATAKEQMEQSESSHDEEDEGPTRAKRGKPEVVHNGLLRPVKL
SRGDLYKPPTADELNQLKEAESLFHCSLLKMQMEELLKEVSLSERRKQLIDSFVQSVTEQ
LQTVPQTSDMELSDLSWLSGGVKVPFVLVPKAAKGKFHMAPPISVTIIGSYPLGTCTKPG
ISVDLAVAIPADVLHPKDALNQRYPRKRAIYLAGLAQHLAASPAIGAMRYSCLHGNRLRP
ILLLSPPGKDSSSFILRLHACPPPGFFKPSRFHPQRNNIRTDWYTGLGSSQPVTSEPPTP
HYNSSVLGDMLPRAHLQFLTTVSSQCAAFAEGVALLKVWLRQRELDQGVGCFSGFLGSML
LAYLLSCHRVSNTMTAYQLLRNSLHFLAFNDLTENGITLAKGPDSTAPSLAEFHTAFQVV
FVDPSGHLNMCADMTACTYKQVQHEASLSLQFWDDPTVDGFHALLMTPKPMIRTSDHVFQ
LCELVKLQCCCKKLNLLSELMDHSGNYVLTALPFILSLLQRGLGQRVRLLTHSLTPDPEW
PVESDAPKHNAQPPLSFGLLLNPEQTASVLERGPPADSPKAEEFRQLWGSRSELRRFQDG
DITEAVVWEGETTCQKRLVPRQLITHLLQLHADIPESCVRYIGGMLDDVIKVGREVCSTG
EEESLKVVQSYDDLSRKLWTLEGLPLSITSVQGAHPALRYTQVFPPVPLKLDYSFFDREK
LSRSLVPHEVKPCPVYITPIQVICHMEGSGKWPHDRVAIRHIKAAFHISLGELLTQHHHY
TCQPSPTHLDVWKDGLVFRIQVAYHREPQVLRESVSPEGLLIVRDNAEAQALEMATMQRP
LLTSTLHGLQQLHPCFGAVCRLAKRWLGAQLFSDDITEDTADLLVASLFLQPAPFTPPGS
PQVGFLRFLHLLSSFDWRNNPLVVNLNSQLTAADYTEIKNDFIASRESLPVMFMATPSDK
KVSIWTKQAPTVQMLQRVVMVAAESLKILEPQLMDTSQIQDVRVVMRPPLDPYDVLIHLS
PKQVPLLSQAVDPPHATFSRGILAGRVANTGGALPVIDFNPVTHYLAELRDAFGDLALFF
YDPYGGTVIAVLWKPKAFTPLPFKTSQMVARRVEVSGEEAHTVPNVEAILEDFRVMGQGL
VKSVEPRTDRWVV
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggaaataaaacgattgcctattgaacaaccagtgaataaattaaagatgaaagcaaca
gccaaggagcagatggagcaatcagagtcttcgcacgatgaggaagatgagggcccgacc
agggccaaaaggggtaagcctgaggtggtccataacgggctcctccgtcccgtgaagctg
tcgcgcggtgacctctacaaacctcccaccgcagatgaactaaaccagctcaaggaggcc
gagagcctgtttcactgcagcctgctcaagatgcagatggaggagctgctgaaggaggtt
tccctgagtgagcgcaggaagcagctgattgactcttttgtccagagtgtcactgagcag
ctccagactgtaccacagacttctgacatggagctaagtgacttgtcatggttgtcagga
ggggtgaaggtcccctttgtcttggtgccaaaggcagccaagggcaagtttcacatggca
ccgcccatatctgttaccatcataggcagctacccactgggcacctgcaccaaaccaggc
atctcagttgatctggcagtcgctattcctgctgatgtcctgcaccctaaagatgcctta
aaccagaggtacccacggaagagggcgatttacctggcaggactggcacaacatcttgcc
gcctctcccgccatcggggccatgcggtactcatgtctccatggcaaccgcctccgtcct
atcctgttgctttcccctccaggcaaagactcctccagtttcatcttgcgactccacgcc
tgccctccaccgggcttcttcaagcccagccgcttccacccccagaggaacaacatccgc
accgactggtatactggcctggggagctctcagccagtgacaagtgagccgcccactccc
cactacaacagctctgttcttggggacatgctacccagggcccacctgcagttcctgacc
actgtgagctcccagtgtgccgcctttgcagagggagtggcactgctcaaagtgtggctc
agacagagggagctggaccagggcgttgggtgtttcagtggattcctgggctccatgctg
ttggcatacctcctctcctgccacagagtcagcaacaccatgacagcctaccagctgctc
cgcaacagcctgcatttcctggctttcaacgacctgacagagaatggaattaccctagcc
aaaggcccagattcaacagcgccctctctcgccgagttccacactgctttccaggttgtt
tttgtcgacccctctggacacctcaacatgtgtgctgacatgacagcctgcacctacaaa
caggtgcagcacgaggcttctctgtcgctgcagttttgggacgaccccaccgtggatgga
ttccatgccctactcatgacccccaagcccatgatcaggaccagtgaccatgtcttccag
ctgtgtgagctggtcaagctgcagtgctgctgtaagaaactcaacctcctcagtgaactc
atggaccacagtggaaactacgtcctcactgcactccccttcatcctctccctcctgcaa
cgaggactgggccaaagagtccgcctcctcacccactcactgacccctgaccccgagtgg
ccggtggagagtgatgctccgaagcacaatgcccagccacccctgtcctttggcctgttg
ctcaacccagaacagacagcctctgtactggagagaggacccccagccgatagtcccaag
gctgaggagttcaggcagctgtgggggtctcgctctgagctgcgtcggttccaggacggt
gacatcacggaggctgtggtgtgggaaggagagaccacctgtcagaagagactggtccca
cgccagctcatcacccacctgctgcagcttcatgcagatataccagaatcctgtgtgaga
tacattggagggatgctggatgatgtcatcaaagtgggacgtgaggtgtgcagtactggt
gaggaggagagtctgaaggtggttcagtcatatgatgatctaagcaggaagctgtggacg
ctggaggggcttcccctgtccataacttcagtgcagggggcccacccagccctccgctac
acccaggtgttccccccagtgcccctaaagctggactactcattctttgacagagagaag
ttgtcccggtcactggtaccccatgaggtcaaaccttgccctgtgtacatcacccctatc
caagtgatctgccacatggagggcagtgggaagtggcctcatgacagagtggccatccgc
cacattaaagcagccttccacatcagcctgggagaactgttaacccaacaccaccactac
acctgccagcccagtcccacacacctggatgtgtggaaggatggcttggtgttcaggatc
caggtagcgtaccaccgggagcctcaggtcctgagggagagtgttagtccagaggggctg
ctcatcgtcagggacaacgcggaggctcaggccctggagatggccaccatgcagcggccc
ctactcaccagcacactgcacgggctccagcagctccacccatgcttcggggcggtgtgt
cgcctggccaagcgctggctgggagcgcagctctttagcgatgacatcacagaggacact
gctgacctgctggtggcgtccctcttcctgcagccggcccccttcactcctccagggtct
cctcaggtcggtttccttcggtttctccacctactctcctccttcgattggagaaataac
cccctggttgtcaacctcaacagccagctcaccgctgctgactacactgagatcaagaat
gacttcatagcctccagagagtctctgcctgttatgttcatggccactcccagcgacaag
aaagtctccatttggaccaagcaggctcccactgtgcagatgttgcagcgtgtggtgatg
gtggctgcagagagcctgaagatcctagaacctcagctgatggacaccagccagatacag
gacgtcagggtggtcatgcggcctccattggatccctatgatgtcctgatccacctgagc
cccaagcaggtgcccttactgagccaagcagtggacccgcctcatgccaccttcagcagg
ggcatcctggctggcagagtggccaacactggaggggcactacccgtcatcgacttcaac
cccgtcacccactacctggcagagctcagggatgcatttggagacctggctctgttcttc
tatgacccctatggcggcactgtgatcgcggtgttatggaaacccaaagccttcacccca
ctgccgttcaagacctcgcagatggtggctcgtcgtgtggaggtgagtggggaggaggct
cacactgtccccaacgtggaggccatcctggaggatttcagggtcatgggccagggcctg
gtgaagtcggtggagccaaggacggatagatgggtggtgtag
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integrated database retrieval system
