Oncorhynchus tshawytscha (Chinook salmon): 112247008
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Entry
112247008 CDS
T05605
Name
(RefSeq) sphingosine 1-phosphate receptor 1
KO
K04295
sphingosine 1-phosphate receptor 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112247008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
otw04030
]
112247008
G protein-coupled receptors [BR:
otw04030
]
Rhodopsin family
Lipid
Sphingolipid
112247008
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
112247008
NCBI-ProteinID:
XP_024271412
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Position
LG20:complement(17290371..17295041)
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AA seq
400 aa
AA seq
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MEASHAAYAAVAAPTVVPMSHSAGYLLRMFHEYQSNAVIREHYNYTGKLKENKYKDGLKP
EAIAFLLICLLIVLENAVVLLAIWKNKKFHLPMYYLLGNLTLSDLLAGFTYMVNIVTSGA
NTLKMTPVLWFLREGGVFITLAASVISLLAIAIERHVTMVRMKPYQGAKRGRMFALIGAS
WVLSVFLGVLPVLGWNCMGRLDQCSTVLPLFAKSYILFFITVFTAVLLAIVVLYVRIFHT
VKSNTKHLGSGSQRKGLARKSQKYMALLKTVTIVLGVFIVCWLPLFILLLLDFCCPARSC
QVLFKADYFLGIAMINSLLNPIIYTLTSKDMRRAILRLLCRRCLLTKDGQVKKIGMSFLE
CSTSKTEAPSHRLEGLEITVSSANFTPSTIKAIYPRMSKT
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatcgcatgctgcttacgctgctgttgctgcccccactgtggttcccatgtcc
cactcggcagggtacctgctccggatgttccacgagtaccagagcaatgctgtcatcaga
gaacactacaactacacaggcaaactgaaggagaacaagtacaaggatggactaaagcca
gaggccatagccttcctgctgatctgcttgctcatagtgctggagaatgctgtggtgctg
ttggccatctggaagaataagaaattccatctgcccatgtactatctgttaggcaaccta
acactctcagacctgctagcaggcttcacctacatggtgaacattgtgacttcaggggcc
aacactttaaagatgacccctgtgctgtggttcctgagggaggggggggtcttcataacg
ctggctgcctccgtcatcagcctcctggccatcgccattgagcgccacgtcaccatggtg
aggatgaagccctaccagggggccaagcgaggccggatgtttgccctgatcggggccagc
tgggttctgtcagtgttcctgggggtgctgcccgtcctgggttggaactgtatgggccgt
ctagaccagtgctccactgtcctgccgctctttgccaaaagctacatcctcttcttcatc
accgtgttcaccgctgtgctgctggccatcgtggtgctttatgtgcgcatcttccacact
gtcaagtccaacacaaagcacctgggctctggctcgcagcgcaaaggcctggcccgcaag
tcccagaagtacatggccctgctgaagaccgtcaccatcgtgctgggtgtcttcatcgtc
tgctggctgcctctcttcatcctcctcttgctggacttctgctgcccggcacggagctgc
caggtgctcttcaaggcggactacttcctgggcatcgccatgatcaactctctcctcaat
cccatcatctatacactgaccagtaaggacatgaggagggccatcctgaggctgctgtgt
cgacgctgcctcctcaccaaggatggccaggtgaagaagatagggatgtcctttctggag
tgcagtaccagtaagactgaggcaccctcccataggctggagggcctggagatcacagtc
tcttctgccaacttcaccccttccactattaaagccatctaccccaggatgtcaaagaca
tga
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