Oncorhynchus tshawytscha (Chinook salmon): 112247012
Help
Entry
112247012 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: HMG box-containing protein 4
KO
K11298
HMG domain-containing protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112247012
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
112247012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4171
HMG_box
Motif
Other DBs
NCBI-GeneID:
112247012
NCBI-ProteinID:
XP_042171340
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MLGVRETSKPVEEKREIMAFEEIKKKGVVEVGMEGEVGLVAGRSQREKRRSYKDLLREEE
EIAAQVRKSSKKRPKDSEPFLLGGDSHKKKKKHSEDYYYRDQQGSGPPPHKKKRKSSDHS
PSLSSSSSSHPTDTAMGLLQAITSPMATGSDPSPHLHKKPSYPSFSSSHFSKDRKRDGST
GGSKGSHSSHSRPMSSSSSQKHSSKSSSLFHGGTGTPKGDLLNIREPDGLRMKLMVSPKE
KAEGEGFPFPPHSSSSSKGGXKKEKDRDRKQLSKVPKKMQQSRDPLPVVGKEVEVEGVWG
RQLLLGGELEAGELVIDDSYKHLSKKKKKSKKSKKKKEKEKDREKDKGGREKKHSKGSGG
DPSRGHTHTHGSANHSAAGGMYAMGAPIPTPILTHHHQSNEVAMMEKKKKKEEREREKHE
KEKDKPKKKNTTAYQVFCKEYRVNINAEQPGLVFGELSKRLAEVWKQLPEKINWXVWKQK
AQYLQHKQNKAEATTVKRKSSTDGVKSKGSMKGMGLGAGLVSPNRASVGVSLSPARVPDV
DPIDAAAHLQLLGESLSLIGHRLQETEGMVAVSGSLSVLLDSILCALGPLTCLTAQIPQL
NGCPRQVLSNTLDNIAYIMPGL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgttgggagttagagagacgagcaagcctgttgaggagaaaagagagatcatggctttt
gaggagatcaagaagaaaggagtagttgaggtagggatggaaggggaagtgggccttgtg
gctggtcgcagtcagagagagaagaggagatcatacaaggacctgctcagagaggaggag
gagattgctgcacaggttcgcaagtcatccaagaaacggcccaaggactcagaacctttc
ttattgggaggggactctcacaagaagaagaaaaagcacagtgaagactactattacaga
gaccagcaaggctcaggcccacctccccacaagaagaagcgaaagtcgtcagaccactcc
ccttccctgtcctcctcgtcttcctcccatcccacagacacagccatggggctcctacag
gccatcacctccccaatggccaccggctcagacccgagcccacacctgcacaagaagccc
tcctacccttccttctcttcctcccacttctccaaagaccgcaaacgtgatgggagcacc
ggaggaagcaaaggcagccactcctctcattcccgccctatgtcctcatcctcctctcaa
aagcactcctccaagtcgtcgtctctgttccatggtggtaccggtacccctaaaggagat
ctcctgaacatacgtgagccggatgggctgaggatgaagctcatggtctcgcctaaggag
aaggccgaaggagagggctttcccttccctccccactcctcctcatcctcaaaaggggga
nntaaaaaggagaaggacagagaccggaaacagctctctaaagtccccaagaagatgcag
cagagccgagatccactgcctgttgtggggaaagaagtggaggtggagggggtatggggg
agacagctcctcctcgggggcgaactggaggcaggagagctggtgatagacgactcgtac
aagcatctgtcaaagaaaaagaagaagagcaagaaaagcaagaagaaaaaggagaaagag
aaggacagagagaaagacaaaggcgggagagagaagaagcacagcaaaggatcaggaggg
gacccatcgagaggccacacccatacccatggctcagccaatcactctgcagctggtgga
atgtatgccatgggggcccccatccctactcccatccttactcaccatcatcaaagtaat
gaagttgcaatgatggagaagaagaaaaagaaggaggagagggaaagggaaaagcacgag
aaggagaaagataagcccaagaagaagaacacaacagcgtaccaggtgttctgtaaagag
tacagggtcaacatcaatgcagagcagccgggactagtgtttggggagctgagcaaaagg
ttggcagaggtgtggaaacagctcccagaaaagataaactggtaagtgtggaagcagaaa
gctcagtacctgcagcacaagcagaacaaagctgaggccaccacagtcaaacgcaagagc
tccacagatggtgtcaaaagcaaaggctctatgaagggcatggggctgggagcagggctg
gtgtcccccaaccgggcgtctgtgggtgtgtccctgtcaccagcacgggtccctgatgtc
gaccccattgatgcggccgctcacctgcaactactgggagagtccctgtccctcatcggc
caccgattacaggagacagaggggatggtggcagtgtcaggcagtctctctgtactgctg
gactccatcttgtgtgcccttggacccctgacctgcctcacagcacagatcccccagctc
aacggatgtccccgccaagtcttgtccaacaccttggacaacattgcctacatcatgcca
gggctgtga
DBGET
integrated database retrieval system
