Oncorhynchus tshawytscha (Chinook salmon): 112247030
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Entry
112247030 CDS
T05605
Name
(RefSeq) autophagy-related protein 9A-like
KO
K17907
autophagy-related protein 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04136
Autophagy - other
otw04137
Mitophagy - animal
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112247030
04136 Autophagy - other
112247030
04137 Mitophagy - animal
112247030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112247030
03029 Mitochondrial biogenesis [BR:
otw03029
]
112247030
Membrane trafficking [BR:
otw04131
]
Autophagy
Autophagosome formation proteins
ATG9 transmembrane protein
112247030
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112247030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG9
EMP24_GP25L
Motif
Other DBs
NCBI-GeneID:
112247030
NCBI-ProteinID:
XP_042152870
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Position
LG14:5615093..5626739
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AA seq
858 aa
AA seq
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MAAHFDTEYQRLEASYSDSPPGEENLLVHIPDGNKSPWHHIENLDLFFQRVYNLHQKNGF
TCMLLGEVFELVQLLFVVGFTVFLANCVDYDILFANKFVNHTDSSKVTLPDAFLPVDVCG
ASIRDNVAVMFVLMISGVFWLHRLIKFIYNVCCYWEIRSFYTNALKMSMAELPYFTWQEV
QARIVEIQKEHQICIHKKELTELDIYHRILRFKNYMVAMVNKSLLPVRFRPPLLGESVFY
TRGLKYNFELIFFWGPGSLFESEWSLKPQYKRGGNRLELADKLASRILWIGIANLLLCPV
VLVWQILYAFFSYTEVIKREPGSLGARCWSLYGRCYLRHFNELDHELMSRLSKGYKASSR
YMNCFLSPLLTVVAKNVAFFAGSLLAVLIALTIYDEDVLAVEHVLSSITLLGVCITVCRS
FIPDKHLVYCPEQLLRLILAHIHYMPDHWQGNAHRYETRDQFSQLFQYKAVFILEELTSP
LVTPFILIFSLRRKSLEIIDFFRNFTVEVVGVGDTCSFAQMDIRQHGHPAWMSEGKTEAS
IYQQAEDGKTELSLMHFAITNPQWQPPTETTHFISQLKERVQRETTGDRQTLTSLSGSEP
RSLIANFLAGPPSLASLHLGRDGSLTDHGPVGVNDGASALRSLSVSSTRGSCSSAHRSAG
HASFASRAMPGSSTDARTASSGSSVWEGQLTSLVLSEYASTEMSIHALYIHELHKQQSGG
ELSRHTWHRQDSDDSSDSVTEEGGSGGGNPNPRNLIPRSHTFPISTPISTPGPIPSSNSG
PNPDRGPTPGQEVTPLQSNSQRRYGGNTDSVGPGGRVVRSERVPMGGWAEQGRGGRHPDT
VPEEGSEDDMPPNTHKVT
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacactttgacacagagtaccagcgcctagaggcttcatacagtgactctcca
cccggagaggagaacctactggtgcacatacctgatggaaacaagtccccgtggcaccac
atagagaacctggacctgttcttccagagggtctataacctgcaccagaagaatggcttc
acttgtatgctgctgggagaggtctttgagctggtccagttgctgtttgtggtaggattc
acagtcttcttggctaactgtgtggactatgacattctgttcgctaacaagtttgtcaac
cacaccgactcctccaaagtcacactgcctgacgccttcctgcctgtggacgtctgcggt
gcaagtatccgtgacaatgtggcagtgatgtttgtgttgatgatatctggagtgttctgg
ctgcatcgcctcatcaagttcatctacaacgtctgctgctactgggagatacgctccttt
tacaccaacgcactcaagatgagcatggcagagctgccatacttcacatggcaggaggtt
caggcccggatcgttgagatccagaaggaacaccagatctgtatccacaagaaagaactc
acagaactggacatataccaccgtatcctgcgcttcaaaaactacatggttgccatggta
aataagtccctccttcccgtgcgtttccgccctccactgctcggggagagtgtgttttac
acccgcggcctcaagtacaactttgaactcatcttcttctgggggccaggctctctgttt
gagagtgagtggagtttgaagccgcagtataagagaggtggtaacaggttggagctggca
gacaaactggcatcacgtatactgtggatcggcatcgccaacctcttactctgtcctgtc
gtactggtctggcaaatactgtatgccttcttcagctatacagaggtgataaagcgtgag
ccaggtagtttgggagcgaggtgttggtctctgtacggtcgatgttaccttcgccacttc
aatgagctggaccacgaactgatgtcacggctcagcaagggctacaaagcgtcctctagg
tatatgaactgcttcctgtccccgttgctgacggtggtggctaagaacgtggcctttttt
gctggctccctattggctgtcctcattgcgctgaccatctacgacgaagacgtcctcgcc
gtggaacacgtcctgtcgtccatcaccctgctgggagtgtgtatcactgtctgcaggtct
tttatcccagacaaacacctggtctactgtccagagcagctgctcaggttgatcctggct
cacatccactacatgccagaccactggcagggcaacgcccatcgctacgagacacgagac
cagttctcacagctcttccagtacaaggctgtgtttatcctagaggagctgaccagcccc
ctggtgactcccttcatcctgatcttcagtctgaggaggaagtctctggagatcattgac
ttcttcaggaacttcaccgtggaggtggtaggggtgggagacacctgctccttcgctcag
atggacatcagacagcacggtcaccccgcgtggatgtctgaggggaagacagaggcatct
atttaccaacaggcggaggatgggaagactgagctgtccctgatgcattttgccatcacc
aacccccagtggcagccccccaccgagaccactcacttcatcagccagctgaaggagaga
gtacagagagagactacaggagacagacagactctcacctcactgtcggggtcagagcca
aggagtctcatagctaacttcctggcaggtcctccctcattggcctctcttcatctgggg
cgggacggctccttgaccgatcacgggccggtgggtgttaatgacggagcgtcagccttg
cgctccctctcagtcagcagcacgaggggcagctgtagctccgcccataggtcggccgga
cacgcctcttttgcaagcagagccatgccgggatcaagtactgatgctcgaactgctagt
tcaggcagtagtgtgtgggaaggtcaactgactagtctcgtcctatcagaatacgcctcc
acggagatgagcatccacgcactctatatacatgagctccataagcagcagtctggaggg
gaattgtcccggcacacctggcataggcaggacagtgacgacagtagtgacagcgtcacc
gaggaggggggttcagggggagggaaccctaacccccgaaacctcatcccccgctcacac
accttccctatctccacccctatctccacccctggccctatccccagctctaactcgggc
cctaaccctgaccgaggtcccaccccgggacaggaagtgacaccactccagagcaacagc
cagcgtcgctacgggggaaacacagactctgttggcccggggggcagagtggtgaggtca
gagcgtgtgcccatggggggttgggcagagcagggacgtggaggccgacaccccgacact
gtacctgaggagggctcagaggacgacatgcctcccaacactcacaaggtgacgtaa
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