Oncorhynchus tshawytscha (Chinook salmon): 112247059
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Entry
112247059 CDS
T05605
Name
(RefSeq) high mobility group protein HMGI-C-like isoform X1
KO
K09283
high mobility group AT-hook protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112247059
03036 Chromosome and associated proteins [BR:
otw03036
]
112247059
Transcription factors [BR:
otw03000
]
Eukaryotic type
Other transcription factors
HMGI(Y)
112247059
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
112247059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AT_hook
Motif
Other DBs
NCBI-GeneID:
112247059
NCBI-ProteinID:
XP_024271477
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All DBs
Position
LG02:complement(16174594..16183495)
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AA seq
187 aa
AA seq
DB search
MQCSYMIQLQPPSYFNWGIRDYEDTTDKLCPSLTLCPEARALGIHAHTPILLRWWTDTGM
SNSGTKELSPQPGVAQSPNSTPPRRGRGRPRKQQEESTGPPTPKRPRGRPRGSKNKGPRA
TPKEIEPVGERRPRGRPRKWPQRVVQEVVQEQQGPSEETEEGPSQSQSLPTEALPSHSPG
QEEAEGE
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgttcctatatgatccagctccaacccccatcatacttcaactggggtattcgt
gactacgaggatacgacagacaaactctgcccctccctaaccctctgccctgaggccaga
gctctgggcatccatgcccacacccccatcttactgcgctggtggacagacacagggatg
agcaacagcgggaccaaggagctgtcaccacagccaggcgtggcccaatcacctaactct
acacctccacgcaggggccggggtcgcccacggaaacaacaggaggagtccactggcccc
ccaactccaaagaggccgagaggacgacccagaggaagcaagaacaaaggccctcgtgcc
acacccaaggaaatagagcctgtcggggagagaagaccaaggggccggccaaggaaatgg
cctcagagagtagttcaagaagtcgtccaggagcagcagggtccttcagaagaaaccgag
gagggcccctcacagtcacagtctttacccactgaggctttgccatctcactctccaggc
caggaagaagcagagggggaatag
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