Oncorhynchus tshawytscha (Chinook salmon): 112247135
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Entry
112247135 CDS
T05605
Name
(RefSeq) protein bicaudal D homolog 2
KO
K18739
protein bicaudal D
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112247135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112247135
04131 Membrane trafficking [BR:
otw04131
]
112247135
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112247135
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
112247135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BicD
DUF4600
COG6_N
Motif
Other DBs
NCBI-GeneID:
112247135
NCBI-ProteinID:
XP_024271582
LinkDB
All DBs
Position
LG22:15393509..15418369
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AA seq
887 aa
AA seq
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MLEVEESGPTGAEGDEEMELCGGDLRVEVMRLNLELQEANEEKLQAARYGLVVLEESAEL
KKKHTQLEEEHETLKHELQQLKEALSDSVTCHKRATAYGETREECLLEETASKEAAMATS
MAELQAELRQARLALGNAHAEIDRQAGLSSQLKKECECSELEKGHMRNEMKEYKVRELRQ
LQDNSELEEENTCLQKQVSVLKENQVEFEAVKLELTHKEEQDDVLRAQLEEAAQLREIAE
RQLDEALEALKEEREQKNTLRRELSALALNPFDSVTHLEMQLDDSGDSGGDREQEKDSGC
NDGPGSGCAPPNPKANGHVQRFSTPRNSDVFLRPAPGLVSDLLSELHLSDGQKLKQQLMQ
AERDKTGLANTVQDLQRQLELSQQAFSEQEDKVGSLTQQLEAVHLQKHILPQGKAAGDQG
AGSTRTLENRLADYDYELDVKSTEVLEARMKAAGEELLKLREELSQAGKRYSALEQRCRQ
EKERWRGEAHELAEKIRQCIKSSRQDQERISELEKEIGVTRKVATDSEGHLSVAQEELLA
FSEELANLYHHICVCNNLTPKRVTLDYYRDGARGQSGGSGGKSNHLHPHPHHGRNKRRSN
ELFAKAVHGGDGDSRPGTPQDSRDNSPTPRCSSPAPVCPSSPTMDFRDPSNVRNLVAVIR
CQIKHLQVAVDLCRQRGTLPYSGGISCGGELESEALMEEVLKLKSLLSTKREQIATLRTV
LKANKQTAELALSNLKTKYETEKSMVSETMVKLRNELKALKEDAATFSSLRVMFTSRCDQ
YVTQLDEMQRQLAVAEDEKKTLNSLLRMAIQQKLALTQRLEDLEAPLSPHGLGSSPRRAR
AKELGTKTGRSPRRNSPRSSPVLTNNVPSTATHHLRALTRSIHTSPR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggtagaggagtcaggcccaacgggggctgagggagatgaggagatggagctg
tgtggcggtgacctgagagtggaggtgatgaggctgaatttggagctccaggaggccaac
gaggagaaactgcaggcggcccggtatggcctggtggtgctagaggagagcgccgaactg
aagaagaagcacacccagctggaggaggagcacgagactctcaaacatgagctgcagcag
ctaaaagaggctctgtcagactcggtgacctgccacaagcgtgcaacagcatatggggag
acccgcgaggagtgcctgttggaggagactgccagcaaggaggctgccatggcaaccagc
atggctgagttgcaggccgagttacggcaggcgcgccttgctctgggcaacgctcacgct
gagatagaccgacaggccggcctctcctcccagctgaagaaggagtgtgagtgttcagag
ctggagaagggccacatgaggaatgagatgaaggagtataaggtgcgggagctccgtcag
ctccaggacaacagtgagctggaggaggagaacacctgtctgcagaaacaggtgtctgta
ctcaaggagaaccaggtggagttcgaggcggtgaagctggagctcacccacaaggaggag
caagacgatgttctccgggcccagctggaggaggcggcgcagctaagggagatcgccgag
cgtcagctggacgaggccctggaggccctcaaggaggagcgggagcagaagaacaccctg
aggagggagctctcggccctagccctcaaccccttcgactcggtcacacacctggagatg
cagctggatgacagtggggacagcggaggggaccgggagcaagaaaaggatagcggttgc
aacgacggcccggggtctggttgcgctcctcctaatcccaaggctaatgggcacgtccaa
cgcttctccacccccaggaacagtgacgtgttcctgaggcctgcccctggcctggtgtct
gacctgctcagcgagttgcacctctctgacggacagaaactcaaacagcaactcatgcag
gctgagagggataagactggtctggctaacacggtccaggacctccagaggcagttggag
ctgtcccagcaggccttcagtgagcaggaagacaaggtgggctccctgacccagcagctg
gaggccgtgcatctgcagaaacacatcctgccccaggggaaggcagcgggagaccagggg
gccgggagcaccaggaccctggagaacaggttggctgactacgactatgagctggacgtg
aagagcacagaggtgctggaggcccggatgaaggcggccggcgaggagctgctgaagctg
cgtgaggagctgtcccaggcggggaaacgttactcggccctggagcagcgctgccggcag
gagaaggagcggtggaggggagaggcccatgagctggctgagaagatccgccagtgcatc
aagtccagccggcaggaccaggagcgcatcagtgagctggagaaggagatcggcgtgacg
aggaaagtggctactgattctgagggtcatctcagcgtggcacaggaggagctgctggcc
ttctctgaggagctggccaacctctaccaccacatctgtgtgtgcaacaacctcacgccc
aaacgcgtcaccctggactactaccgcgacggggccaggggccagtcaggggggagtgga
gggaagtccaaccacctgcacccccatccccatcacggacgtaacaagcgacgctccaat
gagttgtttgcgaaggcagtgcacggaggggatggagacagcaggcctggtactccccag
gattcccgtgacaactcccccacgccacgctgctcctcccccgccccagtctgccccagc
tcccccaccatggacttcagggacccctccaacgtccgcaacctggtggctgtcatccgc
tgccagatcaaacacctccaggtggcggtggatttgtgtcgccagaggggcacgttgccc
tattcgggagggatcagctgcggaggggagctggaaagcgaggccctcatggaggaggtg
ctgaagctcaagtctctactcagcaccaagagagagcagatcgccactctgaggacggtc
ctcaaagccaacaaacagacggcagagttggctctgagcaacctgaagaccaagtacgag
acggagaagagcatggtgtctgagaccatggtgaagctgaggaacgagcttaaggccctg
aaggaggacgctgccaccttctcttcactgagggtcatgttcaccagcaggtgtgaccag
tatgtcacccagctggacgagatgcagaggcagctagcggtggcggaggatgagaagaag
accctgaactccctgctccgcatggccatccagcagaagctggccctgacccagcgcctg
gaggacctggaggcccctctgtccccccacggcctcggcagcagcccccgccgcgccagg
gctaaggagctaggcaccaagacgggccggagcccccgccgtaacagcccccgctccagc
ccggtgctcaccaacaatgtgcccagcaccgccacccatcacctccgagccctcacccgc
agcatccacaccagccctcggtga
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