Oncorhynchus tshawytscha (Chinook salmon): 112247140
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Entry
112247140 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: calmodulin-binding transcription activator 1
KO
K21596
calmodulin-binding transcription activator
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112247140
Transcription factors [BR:
otw03000
]
Eukaryotic type
Other transcription factors
Others
112247140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
TIG
Ank
IQ
Ank_5
AGRB_N
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
112247140
NCBI-ProteinID:
XP_042159781
LinkDB
All DBs
Position
LG22:complement(15686579..16165614)
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AA seq
1827 aa
AA seq
DB search
MAAENKPEGLKKIRNPDRMYRSAVCYAGHAPPKSISDDTEMNNEHGHLKIYLPKKLLECL
PKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDG
YCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLN
VPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVE
QLVQQILDSHQTKPTPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVDPRGGYSSGHS
EVQNNDVSEGKTEHSSHGGGKSYGGGGGSAREKRNGKIPKPVLLHQNSTEVSSTNQVEVP
DTTQNSPVSISSGLNSDPDMADSPVVTGMGHVASVLSSLSQSVFMSEVTGDPGYSMSPNG
GPNAHLMGPDAASQGLVLSGVVADNHKFAFPSGGAGEGPGGAGGADGLSMLSAAGVSEEL
VLSSSLDAGGMKIPETTMNFDPDCFLNNPKQGQTYGGSRLKGGGSSSSSSSSSNGTNGSM
QRSPSMSDSGYSFNSALVKNIKTEDMSFEQQLATEQGYQVGAVVSCGGGGAGSSGTGSAQ
GSLGLTPAGSLLPSGGGLSPSTTLEQMDFSAIDAKQEYSSGAGSVGYGQAMNSPHLSHQS
HSPSFFLQDTQQSGQAQQGRSSMGQKTHLMEHNSHDSTAYMGLQVVKTDSPGINGHLHHH
HQSHHRANCNGGSPTEGPGQGPGSLQLLQYQGGFPGLGPEHEEVVGLEQPGSVGSGQAGG
TENGEGLLKPGDHLQACGGGNPEGGGTEHYLQQANGGGGQGGGGGGEGVTMHNGNGINND
GSNRSQQQQQLQPLLQGAGMVQGLYNTVGPHQGLGGSGSNGGAGGGGLEISLDHFDISFG
NQFSDLINDFISVDGSGTNMAAGGALYNHQLVANHGSDGQATPSGAPQQGQEDGGVGGAR
GAGYSPSELCLQPCCSPQSLGAGAGGAGTESGSLAYMDVAEVVSAAVAHGALGMLQATGR
LFMVTDYSPEWSYPEGGVKVLITGPWQEASSNYSCLFDQISVPASLIQPGVLRCYCPAHD
TGLVTLQVTASNQIISNSVVFEYKARALPSLPSSQHDWLSLDDNQFRMSILERLEQMERR
MAEMASHHQQGSGGGAGGGGGAGAGGGGGGGGGGHNSQTQCVSGQGQAGSSFESRVVVVC
EKMMNRACWAKSKHLIHSKTFRGMTLLHLAAGQGYATLIQTLIKWRTKHADSIDLELEVD
PLNVDHFSCTPLMWACALGHLEAAVVLYKWDRRALAIPDSLGRLPLSIARSRGHTKLAEC
LEQLQREEQQPPAPLPPTTRMSFSPTPDAPTSDSWMVTWASDGVMAPGGKKGGSTTATSS
NLNPDLRRPRSEPSNYYSSECQRDLPLAKKHKPNPEMFQARPDKAMSVPLSLEQQQLHKL
SFSPKSLSHEGLSPEKSLSGGGSAGESGGTKWRSREGFSSGGSGRKGSGGSGGSSLGKEK
LASRLRQREQLGNMLVIAEREMVSTELLSYREDLENQDCMTQMNDLQVNMMTLAEHIIEA
TPERIKRENFVALDGVPLDSTGVSNTMSWLASYLGDVEQLPSIIHLRSLYSGPLAPSSSP
GGSPLREGSMGRPTLPPPADWSEFLQASNSKVERDLAQLTLSDPEQRELYEAARLVQTAF
RKYKGRPFRDQQEVAAAVIQRCYKKYKQLTWIALKYALYKKMTQAAILIQSKFRSYQEQR
KFQQSRRAAVLIQQYYRGYKEFGRLRPHRRGAAAALVQHKLRSSLLSKRQDQAARKIMRF
LRRCRHSPLMDHRLFKRSERIEKGQGT
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgaaaacaagccggaaggactgaagaaaattcgtaatccggatcgaatgtac
agatcagctgtgtgttatgccggccatgctcctcctaagagtatcagtgatgacacagag
atgaacaatgaacatggacatttgaaaatatacctgcccaaaaagctgcttgaatgtcta
ccaaaatgctcgtcgctgccaaaggagagacacaggtggaacaccaatgaggagattgca
gcttacttgataacatttgaaaagcatgaggaatggctaacgacgtcccctaaaacaagg
ccacagaatgggtcgatgatcttgtacaacaggaagaaggtgaagtacagaaaggacggc
tactgctggaagaagaggaaagatgggaagaccacgcgggaggatcacatgaagctcaaa
gtccagggagtggagtgtctgtatggctgttacgtccactcctccatcatccccactttc
caccgcaggtgctactggctgctccagaaccctgacatcgtgctcgtccactacttgaat
gtgccggccatagaggattgtgggaagccatgcgggccaatcctgtgctccatcaacacg
gacaagaaggagtgggccaagtggaccaaggaggagctgattggccagctcaagcccatg
tttcatggcatcaagtggacttgcagcaacgggaacagcagctctggcttctcagtggag
cagctggtgcagcagattctggacagccaccaaaccaagccaactccccggacccacaac
tgcctctgcacaggcaccctgggcgcagggagcagtgtgcaccacaagtgcaacagcgcc
aaacaccgcatcatctcccccaaggtggacccccgtggaggctacagcagcggtcactct
gaggtccagaacaacgacgtgtccgagggcaagaccgagcacagcagccatggagggggg
aaaagttacggagggggagggggcagcgccagggagaaacgcaacggcaagattcccaag
cctgttctcctgcaccagaacagcacggaggtgtcctctaccaaccaggtggaggtccct
gacaccacccagaactcccccgtgtctatcagcagcgggctgaacagcgacccagacatg
gctgacagtcctgtggtgacgggcatgggccacgtggcttccgtcctgtccagcctgtcc
cagagtgtattcatgtccgaggtgaccggggaccccggctacagcatgtcccccaatggg
ggccccaacgcccacctcatgggccccgacgcagcctcccagggactggtgttgtccggt
gtggtggcagacaaccacaagtttgccttccccagcggaggggctggggagggtcccggg
ggggcagggggagcagatgggctgtccatgctgtctgcagccggtgtgtctgaggagctg
gtcctgtccagcagcctggatgccggaggcatgaagatacctgagaccaccatgaacttt
gaccctgactgcttcctcaacaaccccaagcagggccagacctacgggggcagcaggctg
aaggggggtggcagctcctcctcttcctcctcttcctcaaatggcaccaacggcagtatg
cagcgctctccatccatgtcagactctggatacagcttcaactctgctctggtgaagaac
atcaagacggaggacatgtccttcgagcagcagctggccacagagcagggctatcaggtg
ggggcggtggtgagctgtggaggaggtggagctggttcctctgggactggttcagcacag
ggctccctcggcctgaccccggctggctctctgctgccctctggaggaggcctgagcccc
agcaccaccctggagcagatggacttcagcgccatcgatgccaagcaagaatactcttcc
ggggctgggtcagtgggctatggccaggctatgaacagcccccacctctcccaccagagc
cactcgcccagcttcttcctccaggacacccagcagtccggccaggcccagcagggcagg
tcctccatgggccagaagactcatctgatggagcacaactcccacgactccacagcctac
atgggcctacaggtggtcaagacggactcccctggaattaacggccacctccaccaccac
caccagagccaccacagggccaactgcaacgggggctcccccaccgaggggccagggcag
gggcctgggtctctccagcttctacagtaccaggggggcttccctgggctggggccagag
catgaggaggtggtgggtctggagcagccaggcagcgtgggctcaggccaggcaggggga
acagagaatggagagggcctactgaagcctggggatcacctccaggcctgtggaggaggc
aacccagagggaggagggacagagcactacctgcagcaggccaacggtggaggaggtcag
ggaggcggaggaggaggggaaggagtgaccatgcataacggaaatggcatcaacaacgac
ggcagcaaccgctcacagcagcagcagcagctgcagcccctcctccagggggctgggatg
gtccagggcctttacaacaccgtggggccccaccagggcctgggcggatcgggctctaac
gggggagcaggagggggaggcttggagatcagcctggaccacttcgacatctcctttgga
aaccagttctctgacctcataaatgacttcatctctgtggacggtagtggaaccaacatg
gctgccgggggagctctgtataaccaccagctggtggccaaccacggctcagacggtcag
gccacgcctagtggagctccccagcagggccaggaggacggaggggtaggaggggcccgg
ggggcaggatacagcccctcagagctctgtctccagccctgctgcagccctcagtctctg
ggtgccggggctgggggtgcagggacggagtcaggctctctggcatacatggacgtggcg
gaggtggtgtctgcagccgtggcccacggggctctggggatgttgcaggccacagggaga
ctcttcatggtcactgactactcgcccgagtggtcctaccctgagggaggcgtgaaggtg
ctcatcactggtccatggcaggaggccagctctaactacagctgcctgtttgatcagata
tctgtccctgcctctctcatccagcctggggtgctgcgctgctactgcccagctcatgac
actgggttggtgacactgcaagtgactgccagtaaccagatcatctctaactcagtggtg
tttgagtacaaagcccgcgctctgccctcactgccctcttcacaacacgactggctctca
ctggacgataaccagttcagaatgtccatcctggagcgcctggagcagatggagagacgg
atggcagagatggcctcccatcaccagcagggcagcggaggaggtgcaggaggaggaggg
ggagcaggagcaggtggaggaggaggaggcggtggtggtggtcacaacagccagacacag
tgtgtgtcagggcaggggcaggcgggcagcagctttgagagccgtgtggtggtggtctgt
gagaagatgatgaaccgggcctgctgggccaagtccaaacatctgatccactccaagacc
ttcaggggcatgaccctgctccacctggccgctgggcagggctacgccaccctcatccag
acactcatcaagtggcgcaccaagcatgcagacagcattgacctggagttggaggtcgat
cccctcaatgtggaccacttctcctgcacccctctgatgtgggcgtgtgccctaggtcac
ctggaagcggcagtggtcctgtataaatgggaccgacgggccctggccatccctgactcc
ttgggacgcctgcccttgtccatcgcccgctcccgcggccacaccaagctggccgagtgt
ctggagcagctgcagagagaggaacagcagccccctgcacctctgccccccaccacacgc
atgtccttctcccccacccccgacgctcccacctcagacagctggatggtcacatgggcc
agcgacggcgtgatggcgcccggcgggaagaaaggaggctccaccacggccacctcgagc
aacctcaacccagacttgagaaggccgcgatctgagccctccaactactacagcagtgag
tgccagcgagacctgcccctggccaagaaacacaagccaaacccagagatgttccaggcc
cggcccgacaaggccatgtctgtcccactgagcctggagcagcagcagctacacaagctg
tccttcagccccaagagcctgtcccatgagggcctcagcccagaaaagagcctctctggt
gggggaagtgctggagaatccggaggaaccaagtggcgctccagggagggtttctccagt
gggggctcaggcaggaagggctcggggggctctgggggcagcagcctgggaaaggagaag
ctggctagcaggctgagacagagggaacagctggggaacatgctggtgatagctgagaga
gagatggtgagcactgagctgctgtcctacagagaagatctggagaaccaggactgcatg
acacagatgaatgacctgcaggtgaacatgatgactctggcagagcacatcattgaggcg
accccagagaggatcaagagggagaactttgtggccctggacggggtgcctctggacagt
actggggtcagcaacaccatgagctggttggccagttacctcggagacgtggaacagctg
cccagcattatacatctacgatctctgtacagtggacctctcgctccgtcctccagccca
ggggggtctcccctgagggaggggtccatggggaggcccaccctgccccccccggccgac
tggagcgagttcctccaggcctccaacagcaaggtggagagagacctggcccagctcacc
ctgtccgaccccgagcagagggagctgtacgaggccgcccgtctagtccaaactgccttc
cgcaagtacaaggggcgcccattcagagatcaacaggaagtagctgcggccgtcattcag
cgttgttacaagaagtacaaacagcttacatggatagccttgaagtatgcactttataag
aagatgacgcaggccgccattcttatccagagtaagttccgcagctaccaggagcagagg
aagttccagcagagcaggcgggcggccgtgctgatccagcagtactaccgcggctacaag
gagtttggcaggctcaggccccaccgcagaggagccgccgccgccctggtgcaacataaa
ctcagaagtagtctgctctccaagaggcaggatcaggctgccaggaagatcatgaggttt
ctacgccgctgccgccacagccccttgatggaccatagactgttcaagcggagtgaacga
atcgaaaagggccaaggaacatga
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