KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112247149
Entry
112247149         CDS       T05605                                 
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:otw01009]
    112247149
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112247149
Enzymes [BR:otw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     112247149
Protein phosphatases and associated proteins [BR:otw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112247149
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112247149
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD BREX_BrxC_helical PHD_JHD1
Other DBs
NCBI-GeneID: 112247149
NCBI-ProteinID: XP_024271610
LinkDB
Position
LG22:15198329..15217441
AA seq 1593 aa
MAMEGEDFVPPPECPVFEPSWEEFQDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DSFRFTPRIQRLNELEAETRVKLNYLDRIAKFWEIQGSSLKIPNIERRILDLFSLSKVVI
EEGGFDIVSKERRWARVAQKLGYPPGKNIGSLLRSHYERIVYPFEVFHTGASLPQTKPKL
YDGEEVHREYKPHSIPLRQSVQPSKTSSYGRRANRLQPDGPEDSAPHPLSTGSQHISTSP
DPTEEDIEKNPELKKLQIYGAGPKMMGLGLVPRNKSIPKKEELPQTVTVRAAAPAVQVKE
QPGEVKEKGGDGSTTTTAPPPSDATIKSEVKKEEEKHEGGAAHDSGDQDSGENGDGPCTK
MTMRLRRNLGNPQFVDSFVCRMCGRGDEDEKLLLCDGCDDNYHTFCLLPPLTEAPKGNWR
CPKCVAEECKRPAEAFGFEQATREYTLQSFGEMADTFKADYFNMPVHMVPTELVEREFWR
LVSSIEEDVTVEYGADIHSKEFGSGFPMNNGMKNLSQEEADYARSGWNLNVMPVLEQSLL
CHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSVAAEQLEE
VMKKLTPELFEFQPDLLHQLVTIMNPNILMAHGVPVVRTNQCAGEFVITFPRAYHSGFNQ
GYNFAEAVNFCTADWLPAGRSCIEHYRRLRRYCVFSHEELTCKMAACPEKLDLNLAAATH
REMFSIVQEERELRKGLLERGITEAEREAFELLPDDERQCDNCKTTCFLSALACSNCTER
LVCLYHTQDLCNCPTDKLYLRYRYTLDELLAMLHRLKVRAESFDSWANRVKEALEQEEGN
KTGVTDLEVLKAEAAEKKFPDNELLQRLNTTLTDTQHCQQTSTELLNKTLTRRMTLAELK
ALVEKMEILPCVISQLEDVQAVLRTIEEFQTQAQALVSDRDWRRDAPPPEQLQALLEQGA
GLPVDAPECELLKGMQEQSRWLAEVRRTMGPEGSEVTLVVLRSLMEAGCIVPQSVSVETA
MAELQELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEAQLIPVKLPNILSLRGCLSRA
RAWVTDLEEIQNGEHYPCLDDLEGLVAIGRDLPVRMEELRQLELQVASAHSWRDKASKTF
LKKSSQHSLLQVLCPCVEKRKARGEETGCLDDTDTNTLGLSAQDLRDPGAIVTAFKEGEH
QEKGALLRLQQDNLSKPGVEKKEVKTEQEDKENGGGRWGEDPMELDTALHSENCGKGNGD
SNHTTTGSASPPQSVCVCGRAPRPPLLRCHLCKDWFHGGCVPFPSLLLPSAPPTNPLCWW
DWDSRFLCPRCQRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAITWQGRAKEAL
DSPEIQGALEKLQELKQNQPHREEEEEDGKKGNSESVIVLSDSEGGEGEGVIDLTEENSP
KKTPKKEMNGGTQAGCENGIGRYNVTGVGSLLPLVPSLKGPVIELSLTTRTQLEELQLEG
DLLEVSLDQTSTIHRVLQAASEPQRHTLQTLILIELQEQKGAGRGGRAKDKRKRKSQRGD
TGAEGGPRSQDTSESKKTRPLNHIPIQTHPEIL
NT seq 4782 nt   +upstreamnt  +downstreamnt
atggcgatggagggggaagattttgtgcctcctccggagtgcccagtgttcgagccgtca
tgggaggagtttcaggatcccctgggctacattgccaagatccgtccaattgcagagaag
tctggaatttgcaagattcgtcctcctgctgactggcagccaccctttgctgtggaggtg
gatagtttccgcttcacaccccgcatacagagacttaatgagctggaggcggagacacga
gtcaagctaaactacttggaccggatcgccaagttctgggagatccagggatcctctctc
aagatcccgaacatcgagaggcgcatcctggatctcttcagcctgtccaaggttgtgata
gaggaaggagggtttgatatagtcagtaaggagaggcgctgggctcgtgtggcccagaag
cttggctaccctccaggcaagaacattggctccctcctgcgctcacactacgagaggatt
gtctacccctttgaggtgttccacactggtgccagcctgccgcagactaagccaaagcta
tatgatggagaggaggtgcatagagaatacaagccccactccatccccctacgccagtct
gtccagccctccaagacgagcagctacggacgcagagccaatcgtctccagccagacggt
ccagaggattctgccccccaccctctctccactggctctcaacacatctctacatcgcct
gatcccacagaggaggacatagagaagaatccagagctgaagaaactacagatttacggt
gcagggcctaagatgatggggctaggactggtgcccaggaataagagcattcctaagaaa
gaagagctgcctcagactgtgactgtccgggctgcagctcctgctgtccaggtcaaggag
cagccaggggaggtcaaagagaaaggaggagatggcagcacaaccacaacggctcctcct
ccctctgatgccacgataaagagtgaggtgaagaaagaggaagagaaacatgaaggtgga
gcagctcatgacagcggggaccaagacagtggtgaaaacggtgacgggccctgcaccaag
atgaccatgaggctgagacgtaacctcggcaaccctcagtttgtggattcgtttgtgtgc
cggatgtgtggtcgtggcgacgaggatgagaagctcctgctgtgtgacggttgtgatgac
aactaccacaccttctgtctgctgccccctctcactgaggcccccaagggcaactggcgc
tgtccaaaatgtgtggctgaggagtgtaagaggccagcggaggcctttggttttgagcag
gctactagggaatacaccctgcagagttttggggagatggccgacaccttcaaagcagac
tacttcaacatgcctgtccatatggttccgacagagctggtggagagagagttctggcgg
ttggtcagtagtatagaggaggacgtgacagtggagtatggagccgacatccactctaaa
gagtttggcagtggattccccatgaacaacggcatgaagaacctctcacaagaggaagcg
gactatgcccggagcggctggaacctgaacgtgatgccagttctggagcagtccctgctg
tgccacatcaacgcagacatctctggcatgaaggtgccctggctctacgtgggcatggtc
ttctctgctttctgctggcacatcgaagaccactggagctactccatcaactacctgcac
tggggtgagcctaagacgtggtacggggttccctctgtagcagcagagcagttagaggag
gtgatgaagaagctgaccccagagctgtttgagttccaacctgacctcctccaccagctg
gtcactattatgaaccccaacatcctcatggctcacggggtcccggttgtgcgcaccaac
caatgtgctggcgagtttgtcatcactttccccagagcttaccacagcggcttcaatcag
ggatacaactttgctgaagctgtaaacttttgcactgcagactggctgcccgcaggccgc
tcctgtatcgagcactaccgtcgtctgcgacggtactgtgttttctcccacgaggagctg
acctgtaagatggccgcctgcccagagaagctagatctcaacctggccgctgctacgcac
agagagatgttcagcatcgtccaggaggagagggagctacgcaagggcttgctggagagg
ggcatcacagaggctgagagggaggcgtttgagctgctacctgatgatgagaggcagtgt
gataattgcaagaccacctgcttcctgtcggccctggcctgttcaaactgcactgaacgc
ctcgtctgtctctaccacactcaggacctctgtaactgccccacagacaaactctacctc
aggtacaggtacacactggatgagctgctggccatgttacaccggctcaaagtgcgagct
gagtcgtttgattcctgggccaacagagtgaaagaggctctggagcaggaagagggcaac
aagacaggtgtcacggatctggaggtgctgaaggcagaggcagcagagaagaagtttcct
gacaacgagctgctccagagactcaacactaccctcactgacacacagcactgtcagcag
accagcactgagctcctcaacaagacactgaccaggaggatgaccctggctgaactcaag
gctctagtggagaagatggagatcctgccctgtgtgataagccagctggaggacgtacag
gcggtcctgcgtacgatagaggaattccagactcaggcccaggctctagtgagcgacagg
gactggcggcgagacgcccctcccccagagcagcttcaggccctgttggagcagggggct
ggcttacctgtcgatgcccctgagtgtgagctcctgaaggggatgcaggagcagagccgc
tggctagccgaggtgcgccggaccatgggtcccgaggggagtgaggtgaccctggtggtc
ctcaggagcctgatggaggcgggctgcatcgtgccccagagcgtctctgtggaaacggcc
atggcagagctgcaggagctgctgacgatagcagaacgctgggaggagaaggcccagatc
tgtttggagcaacggcagaagcaccctctgtccaccttggaggccatagtgaacgaggcc
cagctcatcccagtcaagctgcccaacatcctgtctctccggggctgtctgagccgggcc
agggcctgggtcactgacttggaggagatccagaatggggagcactacccgtgtctggat
gacctggagggcctggtggcgatagggagagacctgccagtcaggatggaggagctgagg
cagctggagctgcaggtagccagcgcccactcctggagagacaaggcctccaagaccttc
ctgaagaagagcagccagcacagcttgctacaggtgttgtgtccatgcgtggagaagcgt
aaagcgaggggagaggagacgggttgtttagatgacaccgataccaacactctgggcctt
tctgctcaggacctgagagaccctggagccattgtgacggcgtttaaagaaggagagcac
caggagaaaggggctctgctgaggctccagcaggacaacctgtctaaaccaggtgtggag
aagaaagaggtaaagactgagcaggaggacaaggagaacggaggtgggaggtggggggag
gaccccatggagctggacacagctctccactctgagaactgtggaaaggggaacggggac
agtaaccacacaacgacaggcagtgcctctcctccgcagtcagtgtgtgtgtgtggccgg
gcgcctcgcccccctctgctgcgctgccacctgtgtaaagactggttccacggtgggtgt
gtcccgttcccctccctcctgctcccctcagcgccccccaccaaccccctctgctggtgg
gactgggactcacgcttcctgtgcccccggtgccagcgctcgcggcgcccgcgtctggag
accatcctggccctgctggtggcgctccagaggctgcccgtccgtctgccagagggagag
gctctgcagtgtctcacagagagggccatcacctggcaggggcgcgccaaggaggcactg
gacagcccagagatacagggggcactagagaagctgcaggagcttaaacagaaccagcct
cacagggaggaggaggaggaggatgggaagaaagggaactctgagtcggtgatagtgctg
tcggattctgagggaggggagggagagggagtgatagacctcacagaggagaactctccc
aagaagaccccaaagaaagagatgaacggtggcacgcaggctggatgtgaaaacggcata
ggccgttacaatgtaacaggtgtgggctctctgctgccgctggtcccttcactaaaaggc
ccagtgatagagctttccctgaccaccaggacccagctagaggagttgcagctggaggga
gacctgctggaggtgtctctggaccagaccagcaccatccacagggtcctccaggctgct
tcagagccacagagacacacactccaaacactcatactgattgagctccaggagcagaaa
ggggcgggccgtggggggcgggccaaggacaagaggaagaggaagagccagaggggcgac
acaggggcagagggaggaccccggtcccaggacacttcagagtccaagaagacccggccc
ctcaaccacattcccatccagacacaccctgagatcttatga

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