Oncorhynchus tshawytscha (Chinook salmon): 112247184
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Entry
112247184 CDS
T05605
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112247184
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
112247184
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
UB2H
Motif
Other DBs
NCBI-GeneID:
112247184
NCBI-ProteinID:
XP_024271667
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All DBs
Position
LG16:28422661..28426513
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AA seq
1037 aa
AA seq
DB search
MNEKELLHGLNDRFAGFIEKVRHLEHQNELFEREIEEIKLKAQSPASLAQEHEPELMDLR
NLVHDITLQKRQIEIEHQNLEEDFLTLRDKYEQEARDRSNAENGILVLKKDANDAYLAKL
QLDKKAQSLVDEIHFLKNNHEDEISEMVAQIQEAQVTVKAHDFGKPDITEALRDIRVQLE
GHATSDIQQAEEGFRIQFTKLTKAAESNREALKATQQEIQENRRHLQGKTIELDCGKGMR
EALEKQLQELEERHYAEMIHYQDTIRQLENELTNAKLGMSGYLRENQDLLNVKIALDVEI
LSYRKLLEGEESHLYTLSDTHISMPCIYRQSPVYTLPCLARQGGPTRRSEPQYKFVEEII
TDTTRDMEMSEIEETGSEEKVGGEGDKLRQKQGEESDKAERRSGEQVDEDKEKARGKVDV
EVDAPEEEGEQEEESKKQQMVTSAEVEVNGDGVSPSEGENGEEGGDEREEEKGGEPDSIK
KTEDIDRGENTQSEVKSAEATSEGEKEKLDTTEKLDSEINETLEKDDTPNHGESQPEVPM
NGDISTEPKTSESEDSKTGSSIKGEPQGHTEDISKEPKMVSEERKKESPLKEKKEVDLKE
ESAPTEQQQDSPKESPIKERKGVNLTEQSAPTLEQKPDQKEHRDSDQPQEAESALTTQEE
DLPEPTENDMESPDNTAELNSSSTKETLEQVKSPDDSGIKMTQDERTVGGKMPDRILSIT
SECKEDPVQKTPKQEVGPTEQKVSSKDDSVKSVVQNEHNGSEKVTKDVSMGEEKGKESET
SPKPDATVTPKEETTLQPEPTVTPKEETSPKPDATVTPKEETTLYPEQTVTPKEETSPKP
ELAVTAKLETSPKPELAFTTKEETTLQPEPTVTPKEETSPKPDATVTPKKETSPKPEPAV
TPKEEMSPKPEPVVFPKVETSPKPELAVTPEVETSPKPDSTITPKEETSPKPEIAVTPKV
ETSPKPDPIVTTKEETSPKREPIVTPKYDISPKPDPTVTPKEETTPHPEPTVTSKEETSP
KPYPTVTPEEETSHCHP
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaaagaactgctccatgggctgaacgaccgtttcgccggattcatagagaag
gtgcgtcatttggagcatcaaaatgaattgtttgagagggaaatcgaggaaatcaaacta
aaagcacagtcccctgcgtctctggcccaggagcacgagccggagcttatggacctgagg
aacctagttcatgacatcacccttcagaagcgtcagatcgagatagagcatcagaacctg
gaggaagatttcctcaccttgagagacaagtatgagcaggaggcacgtgaccgctcgaac
gcagagaacggcatccttgtgctaaaaaaggacgccaacgatgcatacctcgccaaactt
cagttggacaagaaagcgcagtctttggtggacgagatccacttcctgaagaacaaccat
gaggacgagatatcagaaatggtggcccagatccaagaggctcaagtaacggtcaaggcg
cacgactttggcaaacctgacatcacagaggctctccgggacatccgtgtgcagttagaa
ggtcacgccacttccgacattcagcaggccgaggagggcttccgtatccagttcacaaag
ttaaccaaagcggcagaaagtaacagagaggcgttgaaggcaacccaacaggagatccag
gagaatagaaggcacctgcaggggaaaacaattgaactggactgtgggaaaggaatgaga
gaggccctggaaaaacaactacaagagttggaggagcgtcactatgcggaaatgattcat
taccaggacactatcaggcagctggagaatgagctgaccaatgctaaactaggcatgtct
ggctacctgagagagaaccaggacctgctgaatgtcaaaatagctttggatgtggagatt
ctctcttacaggaaactcctggagggtgaggagtcccatctgtacaccctctctgacacc
cacatctccatgccctgcatctaccgccagtcccccgtctacaccctgccttgcctggcc
cggcagggagggcccacacgcaggtctgaaccccagtacaagtttgttgaagagatcatc
actgacaccaccagagacatggagatgtccgagattgaggagacaggctccgaggagaag
gtcgggggagagggagacaagttgagacagaagcagggagaagagagtgacaaagctgag
aggaggagtggggaacaggtggatgaggacaaagagaaagctagaggtaaagtggatgtt
gaagtggatgccccggaggaagagggtgaacaggaggaagagtctaagaaacagcagatg
gtaacatcagcagaggtcgaggtaaatggagatggagttagccctagtgagggagaaaat
ggagaggagggaggtgatgaaagagaagaggaaaaggggggtgagccagattcaatcaag
aagacagaggacattgacagaggtgaaaatacacaaagtgaagtcaaatcagctgaggcc
accagtgagggagagaaggaaaaactggacacaacagagaagctagacagcgagataaat
gagacattagaaaaagatgacaccccaaatcatggcgaatcccaaccagaggttcccatg
aatggtgacatttcaacagaacccaaaacgtcagagtcagaggatagcaaaacaggaagt
tcaataaagggtgaaccacagggccacacagaggacatctccaaagaacccaaaatggtg
tcagaggagagaaaaaaagaaagccctttaaaagagaaaaaagaggtagatctgaaagag
gagagtgccccaacagagcaacaacaagatagtcctaaagaaagtcccatcaaagagaga
aaaggggtaaatctgacagagcagagtgccccaacactggagcagaaacctgatcagaag
gagcacagagattcagaccaacctcaagaggcagagagtgctctgacaacacaagaagag
gatctccctgagcccacagagaatgacatggaatcccctgataacactgcagagctcaac
agcagttcaaccaaggagacattggagcaggtgaagtcacctgatgattctggtataaaa
atgacgcaagatgagagaacagtaggaggtaaaatgccagacagaattctcagcataaca
agtgagtgtaaggaagatcctgtgcaaaagactcctaaacaggaggtgggtccgacagag
caaaaagtgagcagcaaggatgatagtgtaaaaagcgttgtgcagaatgaacataatggc
agtgaaaaggtcacaaaagatgtctcaatgggcgaggaaaaggggaaagaatctgagaca
tcccctaaacccgacgccactgtcactcctaaagaagaaacaaccctgcaaccagagcca
actgtcacccctaaagaggagacatcccctaaacccgacgccactgtcactcctaaagaa
gaaacaaccctgtatccagagcaaactgtcacccctaaagaagaaacttccccaaaacca
gaactagcagtcacggctaaattagaaacttccccaaaaccagaactagcatttaccact
aaagaagaaacaaccctgcaaccagagccaactgtcacccctaaagaggagacatcccct
aaacccgacgccactgtcactcctaaaaaagaaacttccccaaaaccagaaccagcagtc
acccctaaagaagaaatgtccccaaaaccagaaccagtagtcttcccaaaagtagaaact
tccccaaaaccagaactagcagtcacccctgaagtagaaacttccccaaaaccagactca
accatcacccctaaagaagaaacgtccccaaaaccagaaatagcagtcacccctaaagta
gaaacttcccctaaaccggaccccattgtcaccactaaagaggagacgtccccaaaacgg
gagccaatagtcacccctaaatatgacatatcccctaaaccggaccccactgtcactcct
aaagaagaaacaaccccgcatccagagccaactgtcacctctaaagaggagacatctcct
aaaccgtaccccactgtcacccctgaagaggaaacatcccactgtcacccctaa
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