Oncorhynchus tshawytscha (Chinook salmon): 112247207
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Entry
112247207 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: choline transporter-like protein 2
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112247207
04147 Exosome [BR:
otw04147
]
112247207
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
112247207
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
112247207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
112247207
NCBI-ProteinID:
XP_042160299
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All DBs
Position
LG02:72685150..72701033
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AA seq
705 aa
AA seq
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MAKNKGEARKFDPTFKGPIHNRGCTDVFCCILFILAILGYFAVGILAWSXGDPRKVIYPT
DSRGQFCGQAGTPWSKKKPLLFYFNILKCASPLTLLEFQCPTTQLCVESCPTKHMTLLKA
YLNKGEQEYYKQFCKEGVDFSKMSAPEILRDGLCPSMLMSSKPFTRRCLPALSTMKGGVV
VVGNETIFDNGEGEKVNATDFLDASKKSNVVVEARQVAMRIFEDYTVSWYWILIGLVIAM
VVSLIFIVLLRYLAGIMIWVMIVMVILVIGYGIFHCAMEYRSLKGEPGSDVTIRDLGLQT
DFSVYLQIRQTWLAFMIILSIVEVVVILLLIFLRKRVLIAIALIKEASRAVGHVMSSLFY
PLLTFALLALVIAYWAITAVFLSTSNEQVYKVFNTTECNYSRDTCNPETFNTTNITARCP
DAECLFAFYGGETYYHKYLILFQFYNVFLFFWCANFVTALGQVTLAGAFASYYWAFKKPD
DIPANPICSSLGRALRYHTGSLAFGSLILSLVQVIRVLLEYLDQKLKAAQNRFAKFLLSC
LKCCFWCLEKFIKFLNRNAYIMVAIYGKSFCTSARDAFFLLMRNIIRVAVLDKVTDFLLF
LGKLLIVGIVGICSFFFFSGRIKAVEQTAPSLNYYWVPILTVVVGSYLIAHGFFSVYAMC
VDTLFLCFLEDLERNDGTAERPYFMSQNLLTILKKSNEDQAKTVD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaataaaggtgaagcacggaagtttgaccctaccttcaaaggacccatccac
aacaggggctgcacagatgtgttctgctgtattctcttcatcttggccatactgggatac
tttgctgtggggatcctggcctggtctncaggggaccccaggaaggttatctacccgact
gacagcagaggacagttctgtggccaggccgggaccccctggagtaagaagaaacctctc
ctgttctacttcaacatcctgaagtgtgccagtcccctgaccctgctggagttccagtgc
cccaccactcagttatgtgtggaaagctgtcctaccaaacacatgacgttgttgaaagcc
tacctgaacaaaggagagcaggagtactacaagcagttctgcaaggaaggagtggacttc
tccaaaatgagtgctcccgagatcctgagggatggcctgtgtccttccatgctcatgtcc
agcaaaccattcactcgtcggtgccttccagctctcagtaccatgaaaggtggtgtggtt
gtcgttggcaacgagactatttttgacaacggggagggagagaaggtgaacgccactgat
tttctggacgcttcaaagaagtccaatgtggttgttgaggctcgccaggtagccatgagg
atctttgaggactacactgtatcctggtactggatactgattggtctggtgatagccatg
gtggtcagtctcatcttcatcgtcctcctgcgctacctggccgggatcatgatctgggtc
atgatcgtcatggtgatactggtcatcggatatgggatcttccattgtgccatggagtac
cgcagcctgaagggagagccgggttctgacgtcactatccgtgatctgggactgcagaca
gacttctctgtttacctgcagatcagacagacctggctggctttcatgatcatcctgtcc
atcgtggaggtggttgtcatcctgctgctcatcttcctcaggaagagagtcctcatcgcc
atcgccctcatcaaggaggccagcagggctgttggccatgtgatgtcatcactgttctac
cctctgttgacctttgccctgctggccctggtcatagcctactgggccatcaccgctgtc
ttcctgtccacctccaatgagcaggtgtacaaagtgttcaacaccactgagtgtaattac
tccagagacacctgcaatcccgagacgttcaacaccaccaacatcacagcccggtgcccg
gacgccgagtgcctgtttgccttctacggaggcgagacctactaccataaatacctcatc
ctgttccagttctacaacgtgttcctcttcttctggtgtgctaactttgtaacggcgctg
ggtcaggtgaccctggctggggccttcgcatcctactactgggccttcaagaagcccgac
gacatcccagccaaccccatctgctcctcacttggtcgagccctcagataccatacaggc
tcccttgccttcggttccctcatcctgtctctggttcaggtcatcagggttctgctggag
tacctggaccagaagctgaaagctgcccagaatcgctttgccaagttcctgctcagctgc
ctgaagtgctgcttctggtgcctggagaaattcatcaagttcctcaatagaaatgcctac
atcatggtggcaatatatggtaaaagcttctgtacctcagccagagatgccttcttcctc
ctcatgagaaatataatcagggtggctgtcttagacaaggtgactgacttcctattgttt
ttggggaagctcctcatcgttggaattgtgggaatctgttctttcttcttcttctctggg
aggattaaggctgtggagcagactgccccctctctcaactactactgggttcccattctg
acggtggtggtgggatcctacctgattgcccatggattcttcagtgtgtacgctatgtgt
gtggacacactcttcctctgcttcttggaagacctggaacgcaatgacggaactgcagag
agaccctacttcatgtctcagaaccttctcaccattctgaagaagtccaacgaggatcag
gccaagactgtagactag
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