Oncorhynchus tshawytscha (Chinook salmon): 112247227
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Entry
112247227 CDS
T05605
Name
(RefSeq) hyaluronan and proteoglycan link protein 1 isoform X1
KO
K06848
hyaluronan and proteoglycan link protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112247227
Glycosaminoglycan binding proteins [BR:
otw00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
112247227
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GFIT
Motif
Pfam:
Xlink
V-set
ig
I-set
Ig_3
Ig_2
MOSC
Izumo-Ig
SMN_Tudor
Motif
Other DBs
NCBI-GeneID:
112247227
NCBI-ProteinID:
XP_024271716
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Position
LG04:complement(15093016..15115528)
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AA seq
354 aa
AA seq
DB search
MITMLCTVFLSLTLASSVYSETNSPASPPAYTAETELGDQNRVFASRGSNVTLPCRLHRQ
HGMSFGSVGMRIKWTKLSADESVEEDVLVSMGFHKKSYDSFQGRVHLQEADDDDASLVLS
DVSLDDVGKFRCEVIDGMDDVIHEVTLEVQGSVSYSDGVVFPYSPRLGRYNLNFHDAEQA
CLDQDSVVASFDQLYEAWRSGMDWCNAGWLNDGSVQYPVTKPRGPCGGANARAGLRNYGQ
REKSKSHYDVFCFTSGLNGRLYWLVQPDKLTFTEAVQACQDDGAEIANVAQMYAAWKLNG
YDRCDSGWLADGSVRYPISRPRRNCSPTEAAVRFVGFPDKKQKLFGVYCFKGQQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccatgctttgcaccgtttttctttccctgaccctggccagcagtgtgtacagc
gagaccaacagccctgcttctccaccagcctacacagcagagactgaactaggtgatcag
aaccgggtgtttgccagccgtggctccaacgtcactctaccatgccggctccaccgccag
catgggatgtccttcggcagcgtgggcatgagaatcaagtggaccaagctgtctgcagac
gagtctgtggaggaggatgtgctagtgtccatgggattccacaaaaagagctacgacagc
ttccagggtcgcgtccacctgcaagaagccgacgatgacgacgcctcgctggtccttagc
gacgtgtccctagatgacgtgggaaagttccgttgtgaggtcattgatggcatggatgat
gtcatccatgaggttaccttggaggtgcaaggtagtgtaagctacagcgatggtgtggtg
ttcccttactccccacggctgggccggtacaacctcaacttccacgatgccgagcaggct
tgcttggaccaggactctgtggtggcctccttcgaccagctctacgaggcctggaggagt
ggcatggactggtgcaatgccggctggctgaacgacgggtccgtgcagtaccccgtcacc
aaacctagagggccctgtggaggtgccaacgccagggcgggcctgaggaactacggccag
cgtgaaaagtccaagagccactatgatgtcttctgcttcacctctggcctcaacggtcgt
ctctactggctggtgcaacccgacaagctgacgttcacagaggctgttcaagcgtgccag
gatgacggggctgagatcgccaatgtggcccagatgtacgctgcctggaagctgaacggt
tatgaccgctgcgactctggctggctggctgacggcagcgtccgctaccccatctccaga
ccccgcaggaactgcagcccaacagaggcggccgtgcgctttgtgggattccctgacaag
aagcaaaagctctttggtgtctactgcttcaagggccagcagtga
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