Oncorhynchus tshawytscha (Chinook salmon): 112247295
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Entry
112247295 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 76
KO
K24755
WD repeat-containing protein 76
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112247295
03036 Chromosome and associated proteins [BR:
otw03036
]
112247295
03400 DNA repair and recombination proteins [BR:
otw03400
]
112247295
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
112247295
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
112247295
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
112247295
DSBR (double strand breaks repair)
Other DSBR factors
Others
112247295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_RFWD3
MIOS_WD40
PapJ
Motif
Other DBs
NCBI-GeneID:
112247295
NCBI-ProteinID:
XP_024271784
LinkDB
All DBs
Position
LG12:complement(74494088..74503022)
Genome browser
AA seq
534 aa
AA seq
DB search
MVSEEPNLPNAFVKLYYILQEMKPANTKNGVPVLHSAKDGCKPKKFTPDEVLVPNPSFKE
NQGTKRKMQPGSLSIYELERLENIRQNQVFLSSIKLLEAKQDLKPEKTQRGLKRQNNKVA
WTEILPPRTKSLRIQKKEAERLPLPLEPHRIYYEVERIEHARKPEGPISMEPINMEEDSS
LPPELLKLWTEDLIKEEKEELGLEEYRSTLKSMELSEIGGVAKVVKSRIFSVAFHPCSSR
LLMAAGDKLGGVGLWNLDSDMGDEGVLLFEPHVQPVACMAFSRSHPTDLLTLSYDGTLRS
TDVEKAVFDEVYRIKDGLRTFDFLSHDCSTLVTGDWYGDVAIVDRRTPGTSHESLHSLDT
KTVRCVHVHPVQKQYIMVAENSIVSIYDARCLKARRREPVSQLYGHSKSISSAYFSPGTG
NRVVTTCLDNNIRIYDTSELTSRAPLLTSIQQNLYTGRWLSKLQAMWDPKRDDCFVVGSM
QRPRRVQVFHESGQLQHSFQDPEMTTVLSVTAFHPTRNALLGGNASGRLYVFTD
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggtttcggaagaaccaaatcttccgaacgcgtttgtgaaattgtactacatattgcag
gaaatgaagccagcgaacaccaagaatggtgtccctgtactccattcagcaaaagatggg
tgcaaacccaagaaattcaccccagatgaagtactggtaccaaatcccagcttcaaagaa
aatcaaggaacgaaaagaaagatgcaacctggaagtttatcgatatatgaattggaacgg
ttggaaaatatcagacaaaaccaagtgttcctgtcctccataaaactgcttgaggccaag
caggatttgaaaccagaaaaaacacagcgaggtctcaagagacagaacaataaggtagcc
tggacagagatactgcctcctcgcaccaagtccttgagaatacagaagaaggaagcagag
cgactccccctgcccctggaaccacacaggatttattatgaagtcgaacgaattgaacat
gccaggaagccagagggtccaattagtatggagccaatcaacatggaggaggatagttca
ctgccacctgaacttctcaagctgtggacagaggatttaatcaaagaagaaaaggaggag
ttgggtctggaagagtaccgtagtactctgaagagcatggagctgagtgagattggagga
gtagctaaggtggtgaagagtcgtatcttctctgttgccttccacccgtgtagcagtcgt
ctgctcatggctgctggggacaagttgggtggagtggggctgtggaacctcgactctgat
atgggggatgagggcgtgctgctatttgagccacacgtccagccggtggcctgcatggcc
ttctccaggtcacatcctacagacctgttgaccctcagctacgacgggacgctacggagc
acagatgtggagaaagctgtttttgatgaggtgtatcggatcaaggatggcttgagaacc
tttgacttcctgtcacatgactgttcgacgctggtcaccggggactggtacggagacgtt
gccatcgttgacaggcggactccaggaacctctcatgagtccctccatagcctggatacc
aagacggttcgctgtgttcacgtccaccctgttcagaagcagtacatcatggtggctgag
aacagtattgtgagcatttacgatgctcgatgtttgaaggcgcgtcgaagagagccagtc
tcccagctctatggtcactcaaagagcatctcaagtgcctacttctctcctggcactggc
aacagagtagtgaccacctgcctagacaacaacatcaggatttatgacacctcggaactg
acctccagagctccgctactgacctccatccaacagaacttgtacacagggcgctggctg
tccaagctgcaggcgatgtgggaccccaagagggacgactgcttcgttgtgggcagcatg
cagcggcctcgcagagtccaggtgttccatgagagtgggcagctccagcactccttccag
gacccagagatgaccactgtgctctcagtcacagccttccaccccaccaggaacgctcta
ctggggggtaacgcctccgggcggctgtacgtcttcactgactga
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