Oncorhynchus tshawytscha (Chinook salmon): 112247309
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Entry
112247309 CDS
T05605
Name
(RefSeq) bromodomain and PHD finger-containing protein 3 isoform X1
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112247309
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
112247309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPL1
zf-HC5HC2H_2
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
PHD_NSD
FYVE_2
CtsR_C
DNA_topoisoIV
C1_1
Motif
Other DBs
NCBI-GeneID:
112247309
NCBI-ProteinID:
XP_024271799
UniProt:
A0A8C8JNP6
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All DBs
Position
LG02:complement(16720019..16740138)
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AA seq
1242 aa
AA seq
DB search
MRRLRRRGCRPGVVGLEMGRGRGRGRGRDSSVQLRPPSPYRLQLSPSRETLTYAQAQKMV
EVDLDGRLHRISITDPLPVITEDEMMAQDIVECNSNKENSEQTQSRARPGRKPPNPKGRR
RESKTSSHQSRRSGSQQYTQSHTNSSQHPSHQSPLPEPTFRVLDCPCPLDTPPLPVAYYR
FVEKSGEEQDCEAEYDMDEEDLAWLEMVNQKRVSDGHASVSPDTFELLIDRLERESILES
RSQALSQSAIDEDAFCCVCLDDECLNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCC
LQSPSRPVDCVLCPNRGGAFKQTSDGRWAHVVCAIWIPEVCFANMVFLEPVEGVKNIPSA
RWKLTCYLCKQKGRGASIQCHKANCYRAFHVSCAQKAGLFMKIDPVRETGVNGTTFSVKK
TAFCENHSPVGSRRDGSGDEAVEGRLVGGRGNRGQRSYTQSPPAPPSKKTPKGQKKKKGK
KSLAGQTTRRSAVPVLLVPQIPSHRLNKICIGVAVQRKNQFIQRLHNYWLLKRQSRNGMP
LIRRLHSHLQAHKTAEQREPDEKLCAAREELRYWQKLRQDLERARLLVELVRKRERLKRE
QMKLQQAALELKLTPALILLRSTLDQLQEKDAAQIFSQPVNLAEVPDYLEFISKPMDLSS
MRAKLEAHAYCSTTDLEGDFNLMVSNCLRYNSKETAFHRAALHLREVGGAVLRHAHRQAQ
SIGLDPSTGMHLPDSPNKHGFYQCTWEDVDSLLDPDNRLHLSTEEQLKALLEKLDMVASM
RSSGGRTKRIRLLRREINTVTHKQQRSQSHNGKEEEEEEEENGKKDNVENSPLTSASTPG
KDASPPTLESSCPASSPLPGDAPPEPPVLGLVTAGRRSPGRRSPGRSYKRQRSSPSGGKG
QSDDDAEVEETATPCKQKEDSEKFSPSQTPSPPTNACPLIGVGRRTSVLFKKAKNGARLA
KIRAAQLQYVGTTEGKTNGLDSSPTIIKPPSETALSTPAPPPTPSSPSSHCLRSRGPSSD
SEGDKPLSLVKVEGFTNGLGKHKDDSSDIASNDQKHSVPPPPKRSRGKPALAKVPENQNG
GSVQHPTSLCLCSGGSMLLPFDSDTELTPLDLVWAKCRGYPSYPAMVVDPDMPQEGLLHN
GIPIPVPPGDVLKLGERRQKETGERHYLVLFFDTKRTWQWLPRDKLLQMGMDDTVDKLRL
MEGKKPSVRKSVHTAYDRAMIHLNHVINHVKGNLTFNPSNFI
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggctgcggaggaggggatgcaggccaggagtagttggccttgagatgggcagg
ggtagagggagggggaggggcagggactccagtgttcagctgcggccaccttccccctat
agactgcagctatctccatctagagaaactttgacctatgctcaggcccagaagatggtg
gaggtggacctggatggaaggcttcacaggatcagcatcaccgaccctctgccagtcatc
acagaggatgagatgatggctcaggacattgttgagtgcaacagtaacaaagagaacagc
gaacaaacccagagcagagccagaccagggcgcaaacctcccaacccaaagggccgcagg
agggaaagcaaaacctcatctcaccagagccgacgttctggcagtcagcagtacactcaa
agccacaccaattcctcccaacacccttctcaccaaagccctctccccgagccaaccttc
cgcgtgcttgactgtccgtgtcctttagacacacctcccctacctgtggcctactaccgt
ttcgtagagaagtcaggggaggagcaggactgtgaggcagagtacgacatggacgaggag
gacctggcctggctggagatggtcaaccagaagagggtatctgatggccacgcgtccgtc
tccccggacacctttgagctgctgatcgaccgtctggagagggagtccatcctggagtca
cggagccaggccctgtcccagagtgccatagacgaggatgccttctgctgcgtctgcctg
gacgacgagtgtctcaacagcaacgtcatcctgttctgtgacatctgcaacctggccgtc
caccaggagtgttacggtgtgccctacattcctgagggccagtggctgtgccgctgctgt
ctgcagtccccctcgcgccctgtggactgtgtgctctgccccaacaggggaggtgccttc
aaacagactagtgatggacgctgggcccacgttgtctgtgccatatggatcccagaggtg
tgctttgccaacatggtattcctggagccagtggagggggtgaagaacatcccctcagcc
cgctggaagctcacctgctacctgtgcaagcagaaaggccggggcgcgtccatccagtgc
cacaaggccaactgttaccgggccttccatgtcagctgtgcccagaaggctggcctcttc
atgaagatcgacccggtccgggagactggggtcaacggaaccaccttctctgtgaagaag
actgccttctgtgagaatcactccccagtcgggtcacggcgagatgggtcaggtgacgag
gcggtggagggaaggctggtgggaggcagggggaacaggggtcaaaggtcatacactcag
agccccccggcaccgcccagtaaaaagactcccaaaggccagaagaagaagaagggaaag
aagagcctagctggtcagacgacccgtcgctctgctgtgcctgtgctgctggtgcctcaa
atcccctctcacaggctgaacaagatttgcattggggttgctgtccagaggaagaaccag
ttcattcagaggcttcacaactactggctgctgaaacgtcagtcccgaaatggcatgcct
ctcatccggcgcctgcactcgcatctgcaggctcacaagactgctgagcagagggaacca
gatgagaagctttgtgcggcgagggaggagctacggtactggcagaagttgcggcaggac
ctggagagagcccggctcctggtggaactcgtccgcaagagagagagactaaagagggag
cagatgaaacttcaacaggctgctctggagctgaagttgaccccagcgttaatactgctg
cgttccaccctggaccagcttcaggagaaggacgcagcacagattttctctcagcctgtc
aatctagcagaggtgccagactatctggagttcatctccaagcccatggatttatccagc
atgcgtgccaaactggaggcccatgcctactgctccacaaccgacctggagggggacttt
aacctcatggtgtccaactgcctgaggtacaactccaaggagaccgcgttccaccgagcc
gccttgcacctacgggaggtgggaggagccgtcctccgccacgcccacagacaggcgcag
agcatcgggttggaccccagcacgggcatgcacctcccagactctcctaacaagcatggc
ttctaccaatgcacctgggaggatgtggactctctcctggatccagacaacaggctccac
ctgtccacagaggagcagctgaaggccctgctggagaagctggacatggtggcatccatg
cgctccagtggaggacgaaccaaacgcatccggctgctacgtagagagatcaacacggtc
acgcacaaacaacagcgctcacaatcgcacaacgggaaagaagaagaggaagaggaggaa
gaaaatggaaagaaggacaatgtggagaacagtcctttaacatcagcctctactccgggg
aaagatgcctctccaccaacactagagtcttcatgcccagcgtcgtcccccctgccaggc
gatgccccacctgagccacccgtactgggccttgtgaccgcagggcgaaggtcaccaggg
cgcaggtcaccagggcgctcttacaaacgccagagatcctcgccgagtgggggaaaaggg
cagagtgatgatgatgctgaagttgaggagacagcgacaccgtgcaaacagaaggaggat
tctgaaaagttctctccttcacagactcccagtccccccactaacgcctgtcctttgatt
ggagttggccggcggacatctgttctgttcaagaaagctaaaaatggagcgagactggca
aagattagagcagctcagttacagtatgtagggaccactgagggtaaaaccaatggattg
gacagttcccccaccattataaaacctcccagtgagactgccctttccacccctgcccct
ccccccactccctcctcaccgtcatcccactgcctgaggtccagagggcccagctctgac
agcgagggagacaagcccctctcccttgtcaaagtagaaggctttacaaatggtctagga
aagcacaaagatgactcctcagacatagcatccaatgaccaaaaacatagtgtccccccg
ccacccaaacgcagccgtggtaaaccagctctggctaaagtcccagagaaccagaatgga
ggctcagttcaacatcccacatctttgtgtttgtgctcagggggaagtatgcttttgccc
tttgatagtgacacagagctcacaccacttgacctggtctgggctaagtgtcgtggatat
ccatcatacccagcaatggttgttgacccagacatgcctcaggaagggcttcttcacaat
ggcatccccatccccgtgcctcctggggacgtgttaaaactgggggagcggaggcagaag
gagaccggggagaggcactaccttgtgctgttcttcgacaccaaaaggacctggcaatgg
ctgccacgggacaagttgctgcaaatggggatggatgacacggtggacaaactgcgcctg
atggagggcaagaagcccagcgtccgcaagtctgtacacacggcatacgaccgtgccatg
atacacctgaaccacgttatcaaccacgtcaaggggaacctcactttcaacccctccaat
tttatatga
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