Oncorhynchus tshawytscha (Chinook salmon): 112247357
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Entry
112247357 CDS
T05605
Name
(RefSeq) ubiquilin-1 isoform X1
KO
K04523
ubiquilin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112247357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112247357
03051 Proteasome [BR:
otw03051
]
112247357
Membrane trafficking [BR:
otw04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112247357
Proteasome [BR:
otw03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112247357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
STI1-HOP_DP
UBA
Ubiquitin_5
Rad60-SLD
YukD
DNA_pol_phi
Dsc3_N
CUE
HOIP-UBA
Rad60-SLD_2
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
112247357
NCBI-ProteinID:
XP_024271873
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All DBs
Position
LG04:complement(12293093..12300147)
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AA seq
578 aa
AA seq
DB search
MANTVDEDEQQPFPAECKIIRVTVKTPKEKEEIAIPENSSIKQFKEQIAQRFQAQMEQLV
LIFAGKILKDADLLSHQGIYNGLTVHLVIKTQSRPPELCTSPSNSTASEQAQPEGPTSVP
GPPPVEPTSVPRPSPASSATPTFSLGVGSPGTAAAGPGLAELQRQLMSNPELLAQIMDSP
LVQGMLSNPDMMRQLIMANPQMQLLLQHNPNIAHLFNNPDVMRQTLEIARNPTMMQEMLR
NQDRALSNNALRRMSTDAQGPMLNAAAQEPIAGNPFASSTTLSPGEIQSPRVENGDPLAN
PWVPPASTDTPIGTATPTTTPTLSSNGPQTSLHNLGPAMGGRTSNSGTNTHLSSHTAAMF
NSPAMQSLLQQITENPTLMHNMLSAPYMRSLLNSLSQNPDLAAQMMLNNPLFSGNPQLQQ
QMRQQLPMFLQQMQNPEMLSAMSNPRAMQALLQIQQGLQTLATEAPGFIPGVGLGGAGSD
LNPAPGLSSDPAPSDLSSGSQVVTETGQRQQQQFVRQMLDALASTNQQAQTEELLFQEQV
EQLTTMGFLNPEANLQALIATGGDVNAAVERLLDSPSL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggctaatactgtggatgaggacgagcaacaaccattccctgctgaatgtaagatcatc
agagttactgtgaaaacaccaaaggaaaaagaggaaatcgccattccagagaacagctcc
atcaaacagtttaaggagcagatagcccagcggttccaggcacaaatggagcagctggta
ctcatcttcgctgggaagatcctcaaagatgcagatctgctgagtcatcaaggcatctac
aacggactgaccgtccacctggtcatcaagacccagagcaggcctccggagttgtgtacc
tctccttccaacagcactgcctcagaacaggcccaaccagaaggccctacctctgtccct
ggaccccctcctgtagaacctacctctgtccctcgaccctctcctgcttcttcagccacc
cctaccttcagccttggtgtaggcagtccagggacagctgctgcggggcctggtctcgct
gagctgcagaggcagctgatgtccaaccctgagctgctggcccagattatggacagtccc
ttggtccagggcatgctgtccaacccagacatgatgagacagctcatcatggccaacccc
cagatgcagctgctgctgcagcacaaccccaacatcgcccacctgttcaacaaccctgac
gtcatgagacagaccctggagatagcacggaacccgaccatgatgcaggagatgttgcgc
aaccaggacagggcactaagcaacaatgccctccgcaggatgtccactgatgctcaggga
cccatgctgaatgctgctgctcaggaaccgattgcaggaaacccttttgcttcctcgacg
accttgtcaccaggggaaatccagtccccccgggtggaaaatggagaccccctcgccaac
ccctgggttccccctgcttccacagacacccctataggcaccgccacacccaccactacc
cccaccctgtccagcaatggccctcagaccagcctgcacaacctaggtcccgccatggga
ggtagaacatctaacagtgggacaaacacacatttatcctctcacacagcagctatgttc
aatagtccggcaatgcagagtcttctgcagcagatcacggagaaccccacactgatgcac
aacatgctgtcagccccctacatgaggagcctactcaacagcctgagccagaaccctgac
ctagcagcacagatgatgctgaacaacccactgttttctgggaaccctcaactgcagcag
caaatgagacaacaactcccaatgttcctccaacagatgcagaaccctgagatgctgtcg
gccatgtccaaccccagggccatgcaggcactgctgcagatccaacagggactgcagacc
cttgccactgaggcacctggattcataccaggggttggactgggaggcgccggctcagat
cttaaccctgcccctggattgtcatcagaccccgcccctagtgacctcagcagtgggtcc
caggtagtcacggaaacgggtcagcggcaacaacaacagtttgtgcgtcagatgctagac
gctctcgctagcaccaatcagcaggctcagactgaagagctgctgttccaggagcaggtg
gagcagctgacgaccatgggtttcctcaacccagaggccaacctgcaggccctcatcgct
accgggggagacgtcaacgccgctgtagaacgactgctggactcgccatccttgtaa
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