Oncorhynchus tshawytscha (Chinook salmon): 112247365
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Entry
112247365 CDS
T05605
Symbol
rab11fip5a
Name
(RefSeq) rab11 family-interacting protein 5 isoform X3
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112247365 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112247365 (rab11fip5a)
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
112247365 (rab11fip5a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
TbpB_B_D
Motif
Other DBs
NCBI-GeneID:
112247365
NCBI-ProteinID:
XP_024271882
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Position
LG11:55102050..55169444
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AA seq
504 aa
AA seq
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MSSLNIDYDEDQRWVPTHVQVTVLRGRGLRAKGKHGTSDVYTIIQVGKEKYSTCVLEKTT
VPEWKEECSFELLPGVLEQVGDGGAYPPGSSDLVLTVMHRALMGLDVFLGQAVIPLDKVF
QDRICMKNEWYKLNSKTGKKEKERGDIQVTVQFTKNNLTASMYDLSLGKDKPRSTFGKIK
DRIKGKKRSSKDSDEDSASTIGGGYGPVSRMRNRLPSDGGGEEDYEDDEGGEGRRSKMRN
FFLRGKLRKSSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNFTADS
PDHTAESSPKLASYTCEFTDESGEINIPVPQPVCINGSHVYNTTLDPCPGNPVVPLDPLA
LVKKNLPLSQSLQNLNQRREELPVLLPKGPAADGRRWSFDKAGKEEKVAIAAALEQAGQG
MGEGAREESDRDSRSRNCLDESEQASNSDSGPGEKHKGWFGSKDNHNKPSPVVSPSSGSH
LTPIPLVSPPLPLVCCPGAPLTSL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctaaatatagactacgacgaagaccagagatgggttcctacacacgtccag
gtcaccgttctgcggggcaggggcttgcgggcgaagggcaaacacggtaccagcgacgtc
tacaccattatccaggtgggcaaggagaaatactccacttgtgttctggaaaagaccact
gttcccgaatggaaggaggaatgttctttcgagttgttaccgggtgttctggagcaggtt
ggggacgggggcgcatacccccccgggagcagcgacttggtcctgacggtgatgcaccgg
gcgctcatgggactggacgtgtttctgggccaagccgtgatccctctggataaggtgttt
caggacagaatatgcatgaaaaacgagtggtacaagctgaactccaagactgggaagaag
gagaaggagcgaggggacattcaggtgacggtgcagttcaccaagaacaacctgacagcc
agcatgtacgacctctccctgggtaaggacaagccccggtccaccttcggcaagatcaag
gaccgcatcaagggcaagaagaggagcagcaaggactctgatgaagactccgcctccact
attgggggcggctacggccccgtttcccgcatgaggaaccggttgccgagcgatggcggc
ggggaggaagactacgaggacgatgaagggggggaggggcggaggagtaagatgaggaac
ttcttcctgcgagggaaactgaggaagtcgtccgatacgaggtcgagcacgtcgctaggg
tcggagagtagtgagtcgtcgtcgaggggagggagtctcagtcccaccgctgggatctct
gtagtggtgtctgacctgtctaactcgcctagcaacagcagcaacttcacagcagacagc
cctgatcatacggcagagtcgtctcccaagctggcctcctatacatgtgagttcactgac
gagtctggagagatcaacatccctgtgcctcagcctgtctgcatcaatggaagccatgtg
tacaacaccaccttggacccttgcccggggaaccctgtagtacccttagatcctctagcc
ctggtgaagaagaacctgcctctgtcccaatccctccagaacctcaaccagcggagagag
gagctccctgtcctcctccctaaaggtcccgctgcggatggccggcgctggtcctttgac
aaggcagggaaggaggagaaggtggccatcgcagcggccctggagcaggctggccaaggg
atgggcgagggggccagggaggagtcagacagagacagccggagcaggaactgtctggat
gagtctgaacaggcctcgaactctgactctggtccaggcgagaaacacaaaggatggttt
ggatcaaaggacaaccataacaaacccagcccggtggtgtcacctagctcaggctctcac
ctcacccccatacccctggtctcaccccccttacccctggtctgctgtcctggggccccc
ctcacctccctgtag
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