Oncorhynchus tshawytscha (Chinook salmon): 112247386
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Entry
112247386 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: phenylalanine--tRNA ligase beta subunit-like
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112247386
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112247386
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112247386
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
112247386
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class II (U)
112247386
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112247386
Prokaryotic type
112247386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
112247386
NCBI-ProteinID:
XP_042152266
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Position
LG13:73340243..73355495
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AA seq
595 aa
AA seq
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MPIVSIKRDLVFHALGRTYTDEEFDELCFEFGLELDEITSEKDIIRREQGNTKAEGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKQSMMEAPCYRRVSPANGEPQRLVITEETAAVR
PHAVAAVLRNITFTLERYDSFIELQEKLHQNVCRKRTLIAIGTHDLDTISGPFTYTAKPP
GDIRFKPLNQAKEYTAQELMSLYKTDSHLRHYLHIIEDKPVYPVIYDSNNIVLSMPPIIN
SVVFLGDHSKISLNTKNVFIECTATDLTKAKIVLDMMVTMFCEYCEEPFTVEVVEVVYPD
GRTCLYPELAYRKETLSADFINCKVGISESTEHIAQLLTKMCLHSEVTSDGKQIEVEIPP
ARSDVNHACDIMEDAAMAYGFNNIPRTTPRTYTVASQLPLNKLSELLRQDLAAAGFTEAL
TFTLCSQEDIADKLLKNISETRACHISNPKTAEFQVARTTLLSGLLKTVAANRKTPLPLR
LFEISDVVLKDETKDVGARNNRRLCAVYYNKSPGFEVIHGLMDRVMQLLEIKPGQGNGYH
IQAADDSTFFPGRCAEIFACGKSIGRLGVLHPSVINHFELTMPCSALDIDIEPIL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgccgattgtcagtataaaaagggatcttgtgttccatgccttgggcagaacatacact
gatgaagaatttgatgagttgtgttttgagtttgggctggagcttgatgagatcacctca
gagaaggacatcatccgtcgtgagcaggggaacactaaggcagagggggcatctgatgtg
attctgtataagattgatgtcccagctaaccgctatgatctgctgtgtctggaaggactg
gtcaggggcctgcaggtcttcaagcaaagtatgatggaagcaccttgctacaggcgtgtg
agtccagccaacggagagcctcagaggctggtcatcacagaggagacggctgctgtgcga
ccccacgctgtggctgcagtcctgaggaacatcaccttcacactggaacgctacgacagc
tttatcgaactacaggagaaactccatcagaatgtctgtaggaaaaggactctgattgcc
atcggcacccatgatctggacaccatttcaggccccttcacctacacagccaaaccacct
ggtgacatacgcttcaaacctctcaaccaggcaaaggagtacaccgcacaggaactcatg
agcctctacaagacagacagccacttgcgacactatctgcacattattgaagacaagcct
gtatatcctgtcatctatgacagcaacaacattgtactgtctatgcctccaatcatcaat
tctgttgtttttttaggggaccattccaaaatctccttgaatacgaagaatgtttttatc
gagtgcacagccactgatcttaccaaggcaaaaatcgtgttggacatgatggtgacaatg
ttctgcgagtattgtgaggagcctttcacggtagaggtggttgaggtggtgtacccagat
ggcaggacctgcctgtacccggagctggcttacaggaaggagactctgtcagcagacttc
atcaactgcaaagttggcatcagtgagtcaactgagcacatcgcccagctgttaaccaag
atgtgcttgcactcagaggtcacaagcgacggcaaacagatcgaggtggagatcccgccc
gcgcgctctgacgtcaaccacgcctgtgacatcatggaggacgccgccatggcgtacggt
ttcaacaatattccccgcaccacgccccgcacctataccgtagccagtcagctcccactg
aataagctgtcagagctgctgagacaggacctggctgctgctggattcacagaggcactc
accttcaccctgtgttctcaggaggacatagctgacaagctgttgaagaacatctccgag
accagagcatgtcacatctccaaccccaaaacagcagagttccaggtggcgcgcaccacc
ctgctgtcaggcctgctgaagactgtggctgccaacaggaagacgcctctgcctctgagg
ctgtttgagatttcagacgtggtgctcaaggatgaaaccaaagacgtgggggccaggaac
aaccgtcgtctgtgtgctgtctactacaacaagagtcctgggtttgaggtaatccacggc
ctgatggacagggtcatgcagctgctggagatcaaaccaggccagggcaatggctaccac
atccaggctgccgacgattccactttcttccctggtcgctgtgctgagatctttgcatgc
gggaagagcataggacgcctcggggtccttcaccctagtgtcatcaaccactttgagctc
accatgccatgctccgccctggacatcgacatcgagcccatcctgtga
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