Oncorhynchus tshawytscha (Chinook salmon): 112247433
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Entry
112247433 CDS
T05605
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112247433
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
112247433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
112247433
NCBI-ProteinID:
XP_024271956
LinkDB
All DBs
Position
LG10:67861903..67917114
Genome browser
AA seq
1430 aa
AA seq
DB search
MASKETTAAVFINVSREITESIRRLTDKQSIKFVRAVKQDTKNGRSEDRILVLATWRLFL
FAVKVPSKMEVTFNFLEIRAMNTYPDHQVVIDTDKSTHSLRLQSQDHLDHMMNHVNYALS
RIFNNSMYAPAICRTEGDVSDGVQKFSPNSESSVETQKTCGGFSETYAALCDYNGIGCKE
EVQWDVDTIYHSQDNREFNLLDFSHLDSRDLAVMVASMAYNTWFTKLYCKDMRIGSEVVE
QVLHTVSKSSSLEELTLENAGLKSDFPQKMATALSENPASVIHSLNLAHNPLDNQGVSNL
IQLVCRLNKGLRLLNLSKTSLSSKGVVSLSQALCSSDDYTNSLLHLDLSKNPGILSGEDA
TNMYLFLAQTNCLVHLDLSGTDCAVDSLFGALLRGCCADLSYLNLSKNCFSHRKVRETLP
VFRQFFSSAFSLTHVNLSSMKLPLDTLRALFLGLSSNPHITDLHLDISGCELRSAGAGVL
QELFPRVACIGTLDISDNGLDGDLLGVIPAFSRHPSLKHLLLGKNFNIKGRVLHDILQKL
VQLVQDEECALQSLSLADSRLRSRGTVMVNALGSNACLRKVDLSGNSLEDAGAKMLSKAL
QINTTLRSVMWDRNNTTATGFQDVARGLEHNFTLQYMPIPLSDVTQAYRSAPEKIDQALT
KIQHALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRVHQQVCVLRGSEEGKELQ
AARQVLKEARNSRALYPSLCELVHVLSVDGPVRQKLDFLAGELTKAADKELQVIVDSMVS
LCRELCPMSSSAAERLNPPLSSISERVSIPRSTIRTALMERAAQDINRALEEVKLSVVSY
LTNSIVDQILQELYTTHKALLRQVSQVKRWDDGGTGRHTIRITDTLDFPDEEGLGMNIDT
IAIQKRSARTRRIRPVSTRLSLGDDPTSSPPPSALSHSAPLSRSASWECLSSLPTHGAPL
RHVTHARPRPPRRHSRGQVPLDTHCSENGGVNLLEDGLPDFYTKRVLTDSQLSSLHHAQS
LRRKKRRSVLSIFSGFRKNRNSTISNQEKDGSENVYSMIQHPKDPGKVEAMIEVGANGRM
MPSPRPIQGVPLPGMRGASPSPHCLTQRQPSDLVSMVYSCIGAEDEDSDSSFETRPVDRD
TDRSTTSDIQTETHANGHAMSSASLTDRQPDRQTDPVSQDLPMPSTQTDTQKEVDRGTKG
TESLDRQEGAPCGQKSEPPSQSSKPSLASMRQRHLQRSSDKSTDGVGWIDRDGVEEEKNE
KKDRGAEGQRPPIPEKPGKDKTSPKTPSAVTPPEETANERTPPPAPTASTKPTFDLSGPS
VTQDGGTNEMKSLPPVPPASTKPVVDAGLPPAGCQDEGGTNGFPLKAHRNRKANSCDAGM
EPDSPNDLERGFSDRESPVKKPRFPQNRNRSLDTGCPECPEPGTGNGETS
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagagaccaccgctgcagttttcattaacgtcagcagggaaattacagag
agcatcaggaggctcactgataaacaatccatcaaatttgtgcgagctgtgaagcaggac
accaagaacggcagatcagaggaccggatactggttctggcaacatggcgactctttcta
tttgctgtcaaagtcccctccaagatggaggttactttcaacttcctggagattcgggca
atgaacacttatccagatcatcaggttgtaatagacacagacaagtcaacccactccttg
agactgcagtcacaagaccaccttgatcatatgatgaaccatgtcaactatgccctctca
agaatattcaacaactctatgtatgctccggccatctgtcgaacagagggggacgtctct
gatggagtccaaaagttttcaccaaactctgaatcatctgtagagactcagaaaacctgt
ggcggtttctctgagacctacgctgctctgtgtgactataatggcatcggctgtaaagag
gaagtgcagtgggatgtggacaccatctatcactctcaagacaacagggagttcaacctg
ttggacttcagccacctggacagcagggacctggcggtgatggttgcttccatggcgtac
aacacttggttcaccaaactctactgcaaagacatgcgcattgggtcagaggtggtggag
caggtccttcacaccgtcagtaagtccagcagtctggaagaactcactctggagaacgct
ggcctcaaatcagatttccctcagaaaatggcgacagctctgtctgaaaaccctgcctct
gtgatccactcactcaacctggcccacaaccccctggacaaccaaggagtgtcaaacctc
atccaactggtgtgtcgcctcaacaaaggccttcgtctgctcaacctctccaagacgtcc
ctctcctctaagggtgtggtgtctctctcccaggccctctgctccagtgatgactacacc
aactctctgcttcacctggacctgagtaagaaccctgggattctgtctggggaggacgct
acgaacatgtacctgttcctagcccagacgaattgcctggttcatttggacctctctggg
accgactgcgctgtggactcgttatttggtgctctgctgaggggatgttgtgctgatctc
tcttacctgaatctctccaagaactgcttctctcacaggaaagtgagggagactcttcct
gtcttcaggcagttcttcagctcagccttcagtctcacacacgtcaacctgtcttctatg
aagcttcctctggacaccctgagagctctcttcctgggcctgtcttccaatcctcacatc
actgatttacacttggacatcagcggctgtgagctgaggtctgcaggtgccggggtgctc
caggagctgtttcctagagtggcctgcattggaactttggacatatcagacaacgggttg
gatggcgacctgctgggtgtcatcccagccttctccagacacccctccctcaaacacctg
ctgctgggcaagaacttcaacatcaagggcagggtactacatgacattctgcagaaacta
gttcagctagtgcaagatgaagagtgtgccctgcagtccctttctctggctgactcgcgc
ctgcgctctcggggcacggtgatggtgaatgctctgggaagcaatgcttgcctacgcaag
gtggatctgagtgggaacagcctggaggatgcgggggctaagatgctcagcaaagccctg
caaatcaacactacactcaggagtgtgatgtgggatcgcaataacaccacggctacagga
ttccaagatgtggctcggggcctggaacataacttcaccctgcagtacatgcctatcccc
ctcagtgatgtcacacaggcataccgaagcgcacctgagaagattgaccaagcactgacc
aagatccagcatgctctgctgaggaacaaccagacccagaggttctctcagaaacaggct
ctgcgtctacaccagggcctggtcaccagcactgctgaacaggtgatggagcggctgtgt
gtacgcgtacaccagcaggtgtgtgttctccgaggctcagaagaaggaaaggagctgcag
gctgccagacaggtcctgaaggaggccagaaactctcgcgcgctatacccatctctgtgt
gagctggttcatgttctctcagtggatgggcctgtcagacagaaactggactttctggca
ggagagctgaccaaggctgctgataaggaactacaggtgatagtagactccatggtgtct
ctgtgtcgggagttgtgtcccatgtcctcctctgcagcagagagactcaaccctccgctc
tcatccatctcagaacgcgtctctatccctcgctccaccatccgcaccgccctgatggag
agagcagcacaggacatcaacagagccctcgaggaggtgaagctgtctgtggtctcctat
ctgaccaactccatagtggaccagatccttcaggagctctacaccactcacaaagccctg
cttcgtcaggtgtcccaggtgaagcgttgggatgatggaggaacaggcagacacaccatc
agaatcacagacacactggacttccctgatgaggaaggcctgggcatgaacatcgacacc
attgccatccagaagcgcagtgccagaacccgaaggattcggcctgtgtccaccagactg
agtctgggagatgatcccacctcctctcctcctccctcggccctgtctcactctgccccc
ctgtcccgctcagcatcatgggagtgtctatcctcattgcctacccatggtgcaccactg
cgccacgtgacgcacgccaggccgcggccccctcgaaggcacagccgaggacaagtccct
ctggacacacactgttcagagaacggaggagtcaacctgctggaggatggactgcctgat
ttctacaccaagagagtcctgactgacagtcagctgtcatcacttcatcatgctcagtcc
ctgaggaggaagaagagacgcagtgtgctgtcaatcttctctgggttccgcaagaatcgc
aattccaccatctccaatcaggaaaaggatggctcagagaatgtgtactctatgattcag
caccctaaggatcctgggaaggtggaggccatgattgaggtgggggccaatgggaggatg
atgccgtcccccaggcccatccagggcgtaccactgcctgggatgaggggggccagcccc
agcccccactgtctcacacagagacagccttcagacctggtcagcatggtgtatagttgt
atcggagcagaagatgaggactccgacagtagctttgagaccagaccagtggacagagac
actgacagatcgactacatcagacatccagacagagacccatgccaatggacatgcaatg
tcctccgcttctctgacagacagacagcctgacagacagacagatccagtcagtcaggac
ctgccaatgcccagcactcagacagacacacagaaggaggtggacagagggacaaagggg
acagagtcgttggacaggcaggagggagccccctgtggacagaaatcagaacccccttct
cagagcagcaagcccagtctggccagcatgagacagagacacctacagcggagttccgat
aaatcaacagatggtgtaggatggatagatagagacggggtagaagaggagaagaatgaa
aagaaagacagaggagcagaaggacagcgtcctcccattcctgaaaagcctggtaaagat
aagacttctccaaagacaccgtctgctgtcactccacctgaggaaacagccaatgagaga
accccgcctcctgctccaactgcctctaccaagcccacttttgatttgtctggtccttct
gtcactcaagatggaggaactaatgagatgaaaagcctgcctcctgtgccacctgcgtct
accaaaccggtggtagacgcaggtctaccacctgctggttgtcaagatgaaggaggaaca
aatggttttccactgaaggcacatcgcaacaggaaagcaaactcatgtgacgcaggcatg
gaaccggacagtcccaacgatctggagagggggttctcagatcgcgaatcccctgtgaaa
aaacccagattcccccagaacagaaacagatctctggacactgggtgtcctgaatgtccc
gagcccggcaccggcaacggtgagacgtcatga
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