Oncorhynchus tshawytscha (Chinook salmon): 112247479
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Entry
112247479 CDS
T05605
Name
(RefSeq) synapsin-2 isoform X1
KO
K19941
synapsin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112247479
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112247479
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Gene cluster
GFIT
Motif
Pfam:
Synapsin_C
Synapsin
Synapsin_N
Motif
Other DBs
NCBI-GeneID:
112247479
NCBI-ProteinID:
XP_042185555
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Position
LG02:complement(3242230..3457388)
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AA seq
742 aa
AA seq
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MNFLRRRLSDSSFIANLPNGYMTDLQRSDPPPPPPSTATPGVPATSPGQVPAPAPNAAPP
APECGPQPAQAAPAPAPSSGSGFFSSLTSLSSITNVVKQTAVSAGLVDQNPAPGPGHVSM
RFKILLVIDEQQYVWSRLFRGKKIQGDYDIKVEQAAFSEINLVSHANGSCNVDIQLIRNG
TKVVRSIKPDFVLMRQHAYSMAHNEDFRNMIIGLQYAGVPSINSLESIYSLCDKPWAFAQ
LIATCKKLGPDKFPLIDQTFYPNHKDMISMPSFPVVVKIGHAHSGMGKVKVDNLSDFQDI
ASVVAITQTYTTTEPFIDAKYNIRVQRIGSDYKAYMRTSISGNWKSNTGSAMLEQVAMTD
KYKQWVDICSEIFGGLEICAVKAICGKDGKDYITEVVGSSMQLIGEHQAEDRQLISDLVL
TKMNQAQPRTATRSPVQKPREVAEPIKNPGQWRQSQGGAVQAQLTQPQSVEPPAELAPKV
SPPPKPAPPLVLRAATIPIQKQASTPVAKPYSAPVSRPAPAPVQKQSSSPPPKPPPPAVV
KTTSAQVPKPIPSPVQKPAPAPAPAPALAPAHVSAPVLSPNLATVSVPAPVSPPAPAPAP
ARVSAPVLSPNLATVSVPAPVSPPAPAPAPACVSAPVLSPILAPVSVPAPVSPPAPAAAP
VSAPTSSLAPALLPVLSPTPSPVSPPVPPLPHTQPLPPLHSSPSPSLRCLHQQPLPQESQ
QSCPLCLPSPSLYLLYAATPSP
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcctgcgtcgccggttgtctgacagcagctttatagctaatcttcctaacggc
tacatgacagacctccagagatctgaccctccaccgcctcccccctctacagccacccca
ggagtcccagccacatccccaggacaagttccagcaccagcccccaacgctgccccccca
gctccagagtgtgggccacagcctgcccaggctgccccagccccggccccttcttcaggc
tctgggttcttcagctccctgacctccctgagttccatcactaatgtggtaaaacaaaca
gcagtgtcagctggcttggtggatcagaacccagcacccgggcctggtcatgtctccatg
agatttaagatactgctggtcatcgacgagcagcagtacgtgtggtccagactgttcaga
gggaagaagatccaaggagactatgacatcaaagtggaacaggcggcgttctcagagatc
aacctggtatcccatgccaacgggtcgtgtaacgtggacatacagttgatcaggaacgga
accaaagtggtgaggtccattaaacctgactttgtcttgatgaggcagcatgcctatagc
atggcccacaatgaggacttcaggaacatgatcatcggcctgcagtacgcaggagtcccc
agcatcaactcactggagtccatctacagcctctgtgacaagccctgggcgtttgcccag
ctgatcgccacctgtaagaaactaggccctgacaagttccctctgatcgaccagaccttc
tacccaaaccacaaggacatgatctccatgccctctttccctgtggtggtgaagatagga
cacgcgcactctggaatgggaaaggtaaaggtggataatctgagtgatttccaggacata
gccagtgtggtagccatcactcagacttacaccaccacagaacccttcatagatgccaag
tacaacatcagggtccagcggattggcagcgattataaggcttacatgcggacatccatc
tctgggaactggaagagcaacacaggatcagccatgctggaacaggtggccatgacagac
aagtacaagcagtgggtggacatctgctcagagatctttggaggtcttgagatctgtgca
gtcaaagccatctgtggaaaggatgggaaggactacatcactgaggttgtgggttcttcc
atgcagctaatcggagagcaccaggcagaggacaggcagctcatctctgatctggtgctg
actaagatgaaccaggctcagccaaggacggccactcgctctcctgtccagaaaccgagg
gaagtggcagagccaatcaagaaccccggacagtggcgccaatctcaagggggtgccgtg
caggcccagctcactcagccacagagtgtggagcctccagcagagttggcccccaaggtg
tcccctccgccaaagccagccccccctctagttttaagagcggccaccatccccattcaa
aagcaagcctccactccagtggcaaaaccatactctgctccagtctctaggccagcccct
gccccagtgcaaaagcaatcctcttcccctccaccaaagccaccccctcctgcggtggta
aagacgacctctgctcaagtaccaaagcctatcccttccccagtgcaaaagcctgctcca
gctccagctccagctccagcccttgccccagcccatgtctcagccccagtcctatcccca
aacctggccactgtatcagtccctgctcctgtctcacccccagcaccagctccagcccca
gcccgtgtctcagccccagtcctatccccaaacctggccactgtctcagtccctgctcct
gtctcacccccagcaccagctccagccccagcctgtgtctcagccccagtcctatcccca
atcctggcccctgtctcagtccctgcccctgtctcacccccagccccagctgctgcccct
gtctcagctccaacctccagcctagcacccgccttactcccagtcctatccccgacccct
tctcctgtctcacccccagttccacccctgcctcacacccaacccctgcccccactacac
agcagcccaagccccagcctcaggtgtctccatcagcagcccctcccccaggaaagccag
cagagctgccccctctgcctcccaagcccaagcctatacctcctgtacgccgcaactcca
agcccctga
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