Oncorhynchus tshawytscha (Chinook salmon): 112247575
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Entry
112247575 CDS
T05605
Name
(RefSeq) fibrillin-2
KO
K23342
fibrillin 2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112247575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
otw00536
]
112247575
Glycosaminoglycan binding proteins [BR:
otw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112247575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
TB
hEGF
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
TNFR_nem
Motif
Other DBs
NCBI-GeneID:
112247575
NCBI-ProteinID:
XP_042158641
UniProt:
A0A8C8K4H7
LinkDB
All DBs
Position
LG20:43538182..43785478
Genome browser
AA seq
2908 aa
AA seq
DB search
MWTKRIFPCLVGLVALTGFLVVKVTGQDPPTLGGKTLLKVDGDQTAASNRVRRRGKQESL
RGPNVCGSRFHSYCCPGWKTLPGGNQCIVPICRNNCGDGFCSRPNMCTCPSGQIAPNCGT
KSTQQCNIRCMNGGLCAEDHCQCQKGFSGSYCGQPVCDSKCQNGGRCIGPNRCACVYGFT
GPQCERDYRTGPCFTKVSNQMCQGQVSGIVCTKTLCCATVGRAWGHPCEMCPAQPQPCRR
GFIPNIRTGACQDVDECQAIPGLCQGGNCINTVGSYECKCPAGHRQKEGSQKCEDVDECV
TISRICDGGQCFNSVGSYSCVCPSGYIPSPDKTRCIDQQAGSCFGGLLNGRCAQELPGLF
SKATCCCDSGRCWARGALPEICPARRSEEYRRLCVQGVLPYPDGDFGGRPNPMNPLNPLI
PQRPNGGNDPSSPNGGYDPSRPNGGYDPSRPNGRYDPSKPSSGYDPTLNGQGVPNGNGQR
PDLGTATLNQTINVCKQLPNLCLHSRCILVGSSYRCECNNGYTLDTRQECADVDECSSDP
CPNGDCVNTAGSFYCKCHTGFQRNPEKQVCIDIDECLHNGVLCKNGRCLNMDGSFQCICN
AGFQLTPDGRNCVDHDECAGTNMCLNGMCINEDGSFKCLCKPGFTLASSGRYCTDIDECQ
TPGMCMNGRCVNTEGSFKCECLAGLAVGADGRFCVDTHMRSTCYGAIKKGVCVRPFQGAV
TKSECCCANTDYGFGEPCVSCPAKNSAEFQALCGSGIGFSVDGTDINECALNPEICPNGM
CENLRGSFRCFCNTGYESDNTGKTCVDIDECMVNRLLCDNGLCRNIPGSYSCTCPKGYLF
RPDSETCEDVNECENRPCSNGQCRNTAGSFACECSPGSKLDTTGLICIDSLKGTCWLNIQ
DGRCEVNINGGTLKSECCATLGAAWGSPCEQCEKDSICSRGYARPRGVKCEDVNECVVFP
GVCPNGYCVNTKGSFKCQCPDGLTLDSSGRVCVDVRSEHCYLTWEEDSCAKPVPGRFRMD
ACCCTMGAAWGKECEACPLPGTSEYDALCPRGPGFANRGDVLTGRPFYKDINECKVFPSM
CVHGKCRNTIGSFRCHCAGGFSLDMEERNCTDIDECRISPDLCGQGVCVNTPGSFECECS
EGYESGFMMMKNCMDIDECEREPSLCRGGSCENTEGSYECVCPQGHQLTVDGAACEDYNE
CEQSVSLCRNGQCVNVAGTYHCSCDSGYQATPDRQSCIDIDECTIENGGCDLHCTNSGGS
YMCSCNNGYALMTDERSCSDVDECEQEPDICDGGQCTNIPGDYHCLCYDGFMAALNMRLC
IDVNECDLNANICMHGECENTKGSFICHCQPGYSVKKGTSGCTDMDECEIGAHNCDVNAN
CINIPGDFRCSCRVGWVGNGVNCIDMDECTNGTSHCSANAKCLNTPGSYRCACTDGFTGD
GFTCSDEDECAENVNLCENGQCLNTLGGYRCECEMGFTPAPDRRTCQDIDECTFQNICVF
GTCKNIPGMFRCICNGGYELDRSGGNCTDVDECQDPINCVNGLCVNTDGSYECNCPPDFE
LNPTGVGCVDTRVGNCFLEHGPRGDRRSCSVEVGVGVSRSSCCCSLGRAWGNPCELCSAP
NTTDYNTLCPGGEGFRPNPVTIILEDIDECLELPGLCQGGNCVNTFGSFSCDCPPGYYLN
IDSRICEDIDECVVNPVICGPGTCYNTLGNYTCVCPQDYMQINGGNNCMDMRKSLCYRNY
NGTTCENELPFNLTHKICCCAYNVGKAWNKPCEACPTPGTGDYKTLCGNIIPGFKLDIET
GKAVDINECREITGICASGVCINQIGSFRCECPTGFSYNDLLIICEDIDECSSVENLCQR
NADCINSPGSYRCECSEGFNLSPIGACIDRNECLEITNVCSHGECVDIQGGYECRCHHGF
KATPNRKMCTDVDECERLPCRNGTCKNTVGSFNCLCHTGFEFSHHNDCMDIDECQTSFGT
LCRKGQCINSVGSFQCLCEEGYKLTPDAKNCMDVNECMIFPGTCTPGTCQNLDGTFRCLC
PPGYIVQNEQCIDVNECEEDPNICLFGSCFNNPGSFQCVCRPGFILSENSRRCYDTRESY
CFTRFENGKCSVPQAFNTSKAKCCCSTMPKEGWGDPCELCPKKQDVAFQDLCPFGHGIIP
GTGDTRIDLNECVENPGICNNGHCINTDGSFRCECPIGYTLNYTGVHCIDVDECLVGSLC
GNGTCSNVIGGFECNCEEGFEPGPMMTCEDVNECAISPLLCAFRCINTFGGYECMCPGGY
TLRENQRMCQDLDECSEGLHDCESRGMTCKNLIGTFMCVCPPGMVRRLDNEVCEDENECR
SKPGICENGRCINTIGSYICECGGGYESDSTRTQCLDYREGFCFTEVLMTMCQMSSSSRT
PTTKSQCCCDGGRGWGNQCELCPLAGTAGYRKLCPHGPGYATDGMDIDECKVIPDTCKNG
RCINTMGSYRCHCKLGYTSTITGTACVDVDECVMSPKPCNFICKNTEGSYTCSCPRGYVL
QEDGRTCKDLDECQTKRHNCQFMCVNTVGGFTCKCPPGFTQHHTACIDNNECVGEPSLCG
TKGICQNSPGSFNCACQRGYELDDTGLHCDDVNECDSNDRCQHGCQNMLGGYRCNCPQGY
TQHYQWNQCVDENECSNPGSCGSASCYNTLGSFKCACPSGYSFDSFSSSCQDVNECSNKN
PCSYGCSNTEGGYLCGCPLGYFRMGQGHCVSGLGFAKGQYEGPEIEDNTLSPETCYECKI
NDYPKKHGRKRRDANGTQPIEHNQVSLASLDMEVPVTLLLNVSQLNPKEHILELVPAIKP
LVGHVHYVITSGNRKGLFRIQQRDGLCYLHSTKRKGALAAPQDHTLEIASLPLYGKAQFK
ELEDRRDQDYLTGELGENLRMRLHIRLQ
NT seq
8727 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccaagaggatttttccgtgcttggttggactggtggcgttgacgggttttctc
gtagtaaaagtaacaggacaagaccctccgacgctcggggggaaaacgcttctcaaggtg
gatggagatcagacggctgcctcaaatcgagtgaggagaagaggaaaacaggagtcccta
cgagggcccaatgtgtgtggatcacgtttccactcctactgttgtccaggctggaaaacc
ttgcccgggggcaaccagtgtatcgtgcccatttgccggaacaactgtggagatggattt
tgctcacggcccaacatgtgcacatgtcccagtggccaaattgcaccaaactgtgggaca
aagtccacccagcagtgtaacatcaggtgtatgaacggtggcctctgtgccgaggaccac
tgtcagtgtcagaagggcttctcaggctcctactgtggacaacccgtctgcgatagtaag
tgccaaaacggcgggcgctgcattggacccaaccggtgcgcctgtgtctacgggttcact
gggccccagtgtgagagagactacaggacaggcccgtgcttcaccaaggtcagcaaccag
atgtgccagggccaggtgagtggcatcgtgtgcaccaagaccctgtgctgtgccacggtg
gggcgtgcctggggacacccctgcgagatgtgtccggcccagccccagccatgccgccga
ggcttcatccccaacatacgcaccggagcctgccaggatgttgacgagtgccaggccatc
ccgggactctgccagggaggaaattgcatcaacaccgtgggttcgtacgagtgcaagtgt
ccagctggccacaggcagaaagagggctcccagaagtgcgaggatgtggatgagtgtgtc
accatttcccgcatttgtgacggaggacagtgtttcaactcggtgggcagttactcttgt
gtttgtccctctggctacatcccatctcctgacaaaactcgctgcattgaccagcaggca
ggctcgtgtttcgggggtctgctgaacggccgctgtgcccaggagctgcccggcctcttc
agtaaggccacatgctgctgtgacagtggacgctgctgggcacgaggggccctgcctgaa
atatgccccgcccgacgatcagaggagtaccgccggctgtgtgtccaaggagtcctaccc
tacccagatggagactttggagggagacccaaccccatgaatcctctaaatcctttgatc
cctcaaagacccaatggtggcaacgacccgtccagccccaatggtggctatgatccatct
agacccaatggggggtatgacccatccaggcccaatggtaggtatgatccatctaaaccc
agcagtggctacgatccaacactgaatggccaaggggttcctaatggaaatggacaaagg
ccagacttaggcacagcgactctgaaccagacgataaacgtctgtaagcagctgcccaac
ctgtgtctgcacagtcgctgcatcctcgtgggctctagctaccgctgcgagtgcaataac
ggctacaccctggacactcgccaagaatgtgcagatgtagatgagtgttcctccgacccg
tgccccaatggggactgtgtgaacacggccggttccttctactgcaagtgccacacaggg
ttccaaagaaatccagagaagcaggtctgcatcgacattgacgagtgcctgcacaacggg
gttctgtgtaagaacggccgctgtctcaacatggatggaagcttccagtgcatctgtaac
gcaggcttccagctaaccccagacggcaggaactgtgtcgaccatgacgagtgcgccggc
accaacatgtgtctgaacggcatgtgtatcaacgaggacggtagcttcaagtgcctgtgc
aaacccggcttcaccctggcttccagtgggcgctactgcacagatattgatgagtgtcag
actccaggcatgtgtatgaacggccgctgtgtcaacactgagggctccttcaagtgtgag
tgcctggcagggctggctgtgggggcggatggacgcttctgtgtagacacacacatgcgc
agcacctgctacggcgccataaagaagggtgtgtgcgtgcgtcccttccagggagccgtc
accaagtcggagtgctgctgtgccaacaccgactacggcttcggagagccctgtgtgtct
tgcccagccaagaactcagctgagttccaggctctgtgtggaagtggaatcggcttctct
gtggatggaacagacatcaatgagtgtgcactgaacccagagatctgtcccaatggaatg
tgtgagaacctacgaggcagtttccgttgcttctgtaacactggctacgagtctgacaac
acgggcaagacctgtgtggacattgacgagtgcatggtgaaccggctcctctgcgacaac
ggactgtgtcggaacattccaggcagctacagctgcacctgccccaagggctacctcttc
aggccggactctgagacatgcgaagatgtgaatgagtgtgaaaaccgcccctgttctaac
ggacagtgtaggaacacagccggctcctttgcctgcgagtgctcccctgggagcaagctg
gacaccacaggactcatctgcattgacagcctgaaggggacctgttggctgaatatccaa
gatggccgctgcgaggtcaacatcaacggcggcaccctcaagtcagagtgctgtgccacc
ctgggcgctgcctggggaagtccctgtgagcagtgtgagaaagattccatctgttcaagg
ggctacgccaggccgcgaggagtcaaatgtgaagacgtgaacgagtgcgtggtcttccca
ggtgtgtgtcccaatgggtactgtgtaaacaccaagggctccttcaagtgccagtgtcct
gatggtctcacactggactccagtggccgagtgtgtgtggacgtgcggtctgagcactgt
tacctgacgtgggaagaggactcgtgtgccaagcccgtgcccggacgtttccgcatggac
gcctgttgctgcacgatgggcgccgcctgggggaaggagtgtgaggcgtgccccctgcct
ggcacttccgagtatgacgccctctgcccccgaggcccaggcttcgccaaccgaggagac
gtcctcaccggaaggcccttctataaagacatcaatgaatgtaaggtgttccccagcatg
tgtgtccatggaaagtgtcgtaacaccataggcagttttaggtgccactgcgccggagga
ttttccctcgatatggaagaacgcaactgcacagacatagatgagtgtcgtatctctccg
gacctgtgtggccaaggggtttgtgtcaacactccgggtagttttgagtgtgagtgttcc
gagggctatgagagtggcttcatgatgatgaagaactgcatggacatagacgagtgtgag
cgggaaccatccctgtgtcgtggggggtcttgtgagaacacagagggcagctacgagtgt
gtttgcccccagggacaccagctcactgtggacggggcagcgtgcgaggattacaacgag
tgcgagcagagcgtcagcttgtgccggaacggccagtgtgtgaatgtggccggtacctac
cactgctcatgtgactctggttaccaagcaactcctgacagacagagctgcatagatatt
gatgagtgtaccattgagaatggcggctgtgacctgcactgcaccaactcaggggggagt
tatatgtgtagctgcaacaatggctatgcactgatgacagacgagagaagctgttctgat
gtggatgagtgtgagcaggaacctgacatatgtgacggaggacagtgcactaacatccca
ggggattaccactgtctgtgctacgacggctttatggctgccctgaacatgaggctctgc
atagatgtgaatgagtgtgacctgaacgccaacatctgtatgcacggcgagtgcgagaac
accaagggatcgttcatctgccactgtcagcctggctactcagtcaagaagggaacttct
ggatgtacagacatggatgagtgtgagatcggggctcacaactgtgacgtcaacgccaac
tgtatcaacatccccggggacttccgctgttcctgtcgtgtcggctgggtgggcaacgga
gtcaactgtatagatatggatgagtgcaccaatgggacaagccactgcagtgccaacgcc
aagtgtctgaacacacccggctcctaccgctgcgcctgcactgacggcttcactggagac
ggcttcacctgttcagatgaggatgagtgtgcagagaacgtgaatctgtgtgagaacggc
cagtgtctcaacaccctggggggttaccgctgtgagtgtgagatgggcttcacccctgcc
ccggacagacgcacctgccaagacattgacgagtgtaccttccagaatatctgtgtgttt
ggcacgtgtaagaacatccccggcatgttccgctgtatctgtaacggcggctatgagttg
gaccgctccggaggcaactgtacagacgtggacgagtgccaggaccccatcaactgtgtg
aacgggctgtgtgtgaacaccgacggctcctacgagtgtaactgtcctccggactttgaa
ctcaaccctacaggggtgggatgtgtagacacacgtgtagggaactgtttcctggagcat
ggacccaggggtgacaggcggtcctgcagtgtggaggtaggagtgggagtcagccgctcc
tcctgctgctgctccctggggcgtgcctggggaaacccctgtgaactctgctctgctccc
aacaccacggactataatacactctgcccaggaggagagggtttcaggcccaacccagtc
accatcatactagaagacatagatgagtgtttggagctgccaggcctgtgtcagggagga
aactgtgtcaacacgtttggcagcttctcgtgtgactgtcctcctggctactacctcaac
atagacagtcgcatctgtgaagacattgacgagtgtgtggtgaatcctgtaatctgcggt
cctggcacctgctacaacacactggggaactacacctgtgtgtgtccacaggattacatg
cagatcaacggtggaaacaactgcatggacatgagaaagagcctgtgctacaggaactac
aacggcacaacgtgtgagaacgagctgcccttcaacctcacccacaagatctgctgctgt
gcctataacgtgggcaaggcctggaacaagccctgcgaagcctgcccaacccccggcact
ggtgactataagacactttgtggaaacatcatccctggcttcaaactggatattgaaact
gggaaagcagtggatattaatgagtgcagagaaattacaggtatctgtgctagcggggtc
tgtatcaaccagatagggagcttccgctgcgagtgtcccaccggcttcagctacaacgac
ctgctgatcatctgtgaagacatcgatgaatgtagcagtgtggagaacctgtgccagagg
aacgctgactgtatcaacagccctgggagctaccgttgtgaatgctcagagggcttcaat
ctctcccccataggagcctgcatcgaccgcaacgagtgtctggagatcaccaacgtgtgt
agccatggcgagtgtgtggacatccaggggggctacgagtgcaggtgccaccacggcttc
aaggctacgcccaaccgcaagatgtgcacggatgttgatgagtgcgagcggttgccttgt
cgcaacggaacctgcaagaacacagtgggctccttcaactgtctgtgtcacaccgggttt
gagttctcacaccacaacgactgcatggatattgacgagtgtcagacatcctttggcacg
ctgtgcaggaaaggccagtgtatcaacagtgtgggctccttccaatgtctgtgtgaggag
ggctacaagctaacccccgatgccaagaattgtatggatgtgaatgagtgtatgatcttc
cccgggacctgcactcctggaacctgccagaacctggacggcaccttccgttgtctctgt
cccccgggctacatagtccagaacgagcagtgtatagacgtcaacgagtgtgaagaagac
cctaacatctgcctgtttggctcctgcttcaacaacccgggcagtttccagtgtgtgtgc
aggcctggcttcatactgtctgagaacagtcgcaggtgttacgacaccagagagagttac
tgcttcacccgctttgagaacggcaagtgttcggtgcctcaggccttcaacaccagcaag
gcaaagtgttgctgcagcaccatgcccaaggagggctggggagacccctgtgaactttgt
cccaagaagcaggacgtggcgttccaggacctgtgtcccttcggccatggcataatccct
gggactggagacacacgcatagacttgaatgagtgtgtggagaacccaggcatctgtaac
aacggacactgtatcaacacagacggctccttccgctgcgagtgtccaataggctacact
ctcaactacactggagtacactgcatcgatgttgacgagtgtttggtggggagcctatgt
ggcaacgggacgtgctctaacgtgattggagggttcgagtgtaactgtgaggagggcttt
gagccaggccccatgatgacctgtgaagacgtcaacgagtgtgcaatcagccccctactg
tgtgcattccgctgcatcaacaccttcggaggatacgagtgcatgtgtcccggtggctac
actctgagagagaaccagaggatgtgccaggatctggatgagtgttccgaagggctccac
gactgtgagtccagaggcatgacctgcaagaacctcatcggcaccttcatgtgtgtgtgc
ccgccggggatggtgcggcgcctggacaacgaagtgtgcgaggatgagaatgagtgtcgt
agcaagccggggatctgtgagaatggtcgttgtatcaacacgataggcagctacatatgc
gagtgtggaggcggatatgagtctgactctacacggacacagtgtctcgactacagggag
ggcttctgctttaccgaggtgctcatgactatgtgccagatgtcttccagcagccggacc
cccactaccaagtcccagtgctgctgtgacggaggccgcggctggggtaaccagtgtgag
ctctgtcccctggctggcacggcaggctacaggaagctctgtccccacggcccgggatac
gccaccgacggcatggatatagacgagtgtaaggtaatccctgacacgtgtaagaatgga
cgctgcatcaacaccatgggatcctaccgctgccactgcaaactgggctacacctccacc
atcactggaacggcctgcgtggatgtggatgagtgtgtcatgtcccccaagccgtgtaat
ttcatctgtaagaacacagagggaagttacacttgctcctgtccccgtggttacgtgctc
caagaggacggcaggacctgcaaagatttggacgagtgccagaccaagaggcacaactgt
cagttcatgtgtgtcaacaccgtgggcggattcacctgcaagtgtccccctggcttcacc
cagcaccacactgcatgcatagataataatgagtgtgtcggggaaccctccctgtgtggc
accaagggcatctgtcagaactcccctggtagcttcaactgtgcgtgccagcggggttac
gaactggacgacaccggactgcactgtgatgacgtgaacgagtgtgacagtaacgacagg
tgccaacatggctgccagaacatgctgggcggctaccgttgtaactgccctcagggctac
acacagcactaccagtggaaccagtgtgtggatgagaacgagtgctccaacccgggcagc
tgtggatcggcctcctgttacaacacgctaggcagcttcaagtgtgcctgcccctcaggc
tacagcttcgactcattcagcagcagctgtcaggatgtcaacgagtgctccaacaagaac
ccctgtagctacggctgctccaacacagagggaggctacctgtgtggttgcccgctgggc
tattttcgcatgggccaaggtcactgtgtgtcaggcttgggctttgcgaagggccagtat
gaggggccagagatagaagacaacactctctccccagagacctgctacgagtgtaagatc
aacgactaccccaagaagcacggccgcaagaggcgcgacgccaatggaacgcaacccata
gagcacaaccaggtgagcctagccagtctggacatggaagttcctgtcaccctgctgctc
aacgtgtcccagctcaaccccaaggagcacatcctggagctggtgcctgccatcaagccc
ttggtgggccacgtgcactatgtcatcaccagcggcaaccgcaaaggcctgttccgcatc
caacagcgtgacggcctctgctacctacacagcaccaagaggaagggggcactggcggca
ccgcaggatcacacgctggagatcgccagcttgccgctctacggcaaagcccagttcaaa
gagctggaggaccgccgggaccaagactaccttacgggagaactgggggagaacctgcgc
atgaggctgcacatccgactgcaatag
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integrated database retrieval system
