Oncorhynchus tshawytscha (Chinook salmon): 112247582
Help
Entry
112247582 CDS
T05605
Name
(RefSeq) iroquois-class homeodomain protein IRX-6-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112247582
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
112247582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
112247582
NCBI-ProteinID:
XP_042186977
LinkDB
All DBs
Position
LG12:73350516..73355551
Genome browser
AA seq
531 aa
AA seq
DB search
MSFSQFGYPYNATSQFFVSANPSTTCCDSISRSVSDGTSGTQTPATFCCPSYENRLLAST
RTELNAALGMYSSPYAAAAAASQNYASYFPYSAEPSAAIYSSLNPQYEMKDGTGTLHSGI
TQPATYYPYDHSLGQYQYDRYGTMDFNGSARRKNATRETTSTLKTWLYEHRKNPYPTKGE
KIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGDDRKDDLDKSDQDCVTKDS
SECKDEKDLHLSDLEDMEDEDCDKLDSDCEKMAPRGPEEQQDLHRAMSGGGVGPGGPPKR
DCSSERSLSFPNSFHHSFPCGIKSLPTLPSLPTMPSDFLDPLVTSKPPSTTTTIPTGTHT
VSLSHFEVSDRDKPRIWSLARTAATGVILGSAHHGAPELRTGSMLGDCQLQGTRLPVTGT
GQCGPLRGLQDPTNISNAENPFQEGPLLQSKVYSAGSYNHKAVQLHCSSYPALSDSCQYS
TIEGFSSGNAETEPSELSDTCVTLQDDKVTAFRPVMKRLMDTQSLHSGTFI
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctctcagtttggatatccttataatgcaacttcacagtttttcgtgtcggca
aaccccagtacgacttgctgcgattcgatttccaggtcggtctctgacgggacgagcggt
acccagactcctgctaccttctgctgcccttcctacgagaaccggctcctggccagcaca
cggacggagctcaacgcggcactagggatgtatagctcgccctacgctgccgcggccgcc
gccagccagaactatgccagctacttcccctacagcgccgagccctccgctgctatctac
tcatctctgaatccacagtatgaaatgaaggatggcacaggcactctgcattctggtata
actcaacctgccacctactatccttatgaccactcactgggccagtaccaatatgacagg
tatgggactatggactttaatgggtcagccaggaggaagaatgccacacgtgagaccacc
agtaccctgaagacatggctgtatgagcacaggaaaaacccctaccccaccaagggcgag
aagatcatgctggccatcatcaccaaaatgacccttacccaagtttccacctggttcgcc
aacgccaggaggaggctaaagaaggagaacaagatgacctggtcaccaaagaataaggct
ggggacgacaggaaggacgacctggataaaagtgaccaagattgtgtcaccaaagattcc
agtgagtgtaaagatgagaaagaccttcatctgagtgacctggaggacatggaggacgag
gactgtgacaagctggacagtgactgtgagaagatggcacccaggggccctgaggaacag
caggacctccacagggccatgtccggtggtggtgttggccctggaggccctccaaagaga
gactgcagctcagagcgttccctctcctttcccaacagcttccaccactcattcccatgt
ggtatcaagagcctacccaccctgccctctctacccaccatgccctcggacttccttgat
ccactggtgacgtccaagcccccctccaccactaccaccatccccacgggcactcacact
gtgtccctgtcacactttgaggtgtcggaccgggacaaaccgaggatctggtctctggcg
cgtacagcggccacgggggtcatcctgggctctgctcaccacggggccccagagctccgg
acagggagcatgctgggagactgccagctccaggggaccaggctaccagtgactggtacc
ggacagtgtgggcccctcaggggcctccaggatcctaccaacatatccaatgctgagaac
cctttccaggagggccccttgttgcaatctaaggtctatagtgcaggcagctacaaccac
aaggcagtacaactgcactgttcctcctatcctgcgctttcagactcatgccagtactcc
actatcgaaggattctccagtgggaatgcagagacagagccctcggaactcagtgacaca
tgtgtgaccctgcaggatgacaaggtcactgccttcagacctgttatgaagaggttgatg
gacacgcagtcattacacagtgggacttttatttag
DBGET
integrated database retrieval system
