Oncorhynchus tshawytscha (Chinook salmon): 112247583
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Entry
112247583 CDS
T05605
Name
(RefSeq) lariat debranching enzyme isoform X1
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112247583
03009 Ribosome biogenesis [BR:
otw03009
]
112247583
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112247583
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
90S particles
RNase
112247583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
112247583
NCBI-ProteinID:
XP_024272153
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All DBs
Position
LG26:complement(39643573..39648604)
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AA seq
613 aa
AA seq
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MRRGASNKHAISLPRIERPNPSSTFRIPRPADQLLRFKNSAQKKKALTGIYSQSSAMKIA
VEGCCHGELDKIYETIGYLEQKEGVKVDLLLCCGDFQAVRNEGDMKCMAVPQKYRQMQTF
YKYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYMGYAGVVRYKGVRIGGLS
GIFKGHDYRKGHYEFPPYNPETLRSVYHIRNIDVFKLKQIQMPVDVFLTHDWPRGIYHYG
STGELLRKKKFLRQEVESNTLGSPAAAELLAHLQPNYWFSAHLHVKFAALMQHPAKVDAA
PRTTKFLSLDKCLPYRDFLQIVEVADRPGSSQGLEYDPEWLAILKATDSLQTVSPNYWNP
PQNNGLHTRWDFSASEAAMMEAVGDLGGELSIPDNFCLTVPAYDPARPQPHAHPSYSTNP
QTTELCATLGLRDIYAQVGQGGYGGQIGTPELEDDEVQSGDEPSEYPSDTSGLSSSYNPD
EITIEDEWEEEEEGGEKEGRGKSPDAVVPEGEAGEAGGRRDSGPPSRELPPSRMVLTMPE
PKSDPAPPSRLSLNLPPPSHSSPPEREEEEPHVRIPKRTSGETGDPISTGSTPRIKRRNQ
VIYTAVDDDESED
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcggagaggggcctccaacaagcacgccatctctcttccccgtatcgagcgccccaat
ccgagcagcactttccgaataccccgccctgcagaccagctgctcagatttaaaaactca
gcacagaaaaagaaggcccttacgggaatctacagccaatcatcagccatgaaaatagct
gtggaagggtgttgccatggagagctggataagatctatgagacgattggctacctggag
cagaaggagggggtgaaggtagacctgctgctgtgttgtggagacttccaggctgtgagg
aacgagggggacatgaagtgcatggctgtgccgcaaaagtacaggcagatgcagaccttc
tacaagtactactctggagagaagaaggctccggtcctgactatcttcatcggtgggaat
cacgaggcctccaaccatcttcaggagctcccgtacgggggctgggtggctcccaacatc
tactacatgggttatgctggtgttgtgcgctacaaaggagtaaggataggtggcttgtct
ggaatcttcaaagggcatgattacaggaaaggacattatgagttccctccgtataaccca
gaaactctacgcagtgtttaccacatcaggaacatcgatgtcttcaaactcaaacagatc
cagatgcctgtggatgtgttcctgacccatgactggcctcgtgggatctaccattacggc
agcacaggggagctgctgaggaagaagaagttcctgaggcaggaggtggagtccaacaca
ctgggtagtcctgcagcagcagagctcctggcccacctgcagcctaactactggttctct
gcgcacctccacgtcaagttcgctgccctaatgcagcacccggccaaagttgatgctgcc
ccccgcactaccaaattcctctcactggataagtgcctcccatacagggacttcctacag
atcgtagaggtagcagacaggccaggatcgtcccagggtctggagtatgatccagagtgg
ctggccatcctcaaagctacagacagcctgcagactgtcagccctaattactggaacccc
ccgcagaacaacggcctgcacacaaggtgggacttcagtgcttctgaggcagccatgatg
gaggctgtgggtgacctggggggtgaactgtccatccctgacaacttctgcctgaccgtg
ccagcttacgaccctgcccggccacagccccatgcccaccccagctacagcaccaacccg
cagaccaccgagctctgtgccaccctgggtctcagagacatctatgcccaggttgggcag
ggagggtatgggggccagataggcaccccagagctggaggatgatgaagtccagagtgga
gatgaacccagtgagtaccctagtgacacctcaggcctgtccagctcctacaaccctgat
gagatcaccatagaggatgagtgggaggaggaggaggagggaggagagaaagagggaagg
gggaagagccctgatgcagtggtcccagagggggaagcgggggaggcaggagggagacgg
gactcggggcccccctctagagagctgccccccagccgcatggttctgaccatgcctgag
cccaaatcagaccccgctcctccctcacgcctgtccctcaacctacctcctccctctcac
tcctcacctccggaaagggaggaggaggagccccatgtccggatccctaagcgcaccagt
ggggagactggggaccctatcagtacaggcagcacccctaggatcaaacgcaggaaccag
gtcatctacactgcagtggacgatgacgagagtgaggactag
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