Oncorhynchus tshawytscha (Chinook salmon): 112247677
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Entry
112247677 CDS
T05605
Symbol
srsf5a
Name
(RefSeq) serine/arginine-rich splicing factor 5
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112247677 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112247677 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112247677 (srsf5a)
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
SR proteins
112247677 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
112247677
NCBI-ProteinID:
XP_024272256
LinkDB
All DBs
Position
LG11:51753638..51761841
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AA seq
310 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREVNLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGGGGGGGRFSPRFSSYRQGSGGHSGGSSRYGPPVR
TEHRIIVENLSSRISWQDLKDLMRKAGEVTFVDAHRTNKNEGVVEFASHSDMKNAIDKLD
GTDLNGRKLKLSEDRKSRHSRSRSRGSRSYSRSRSRSPRSKSRSRSRNRSRSPRSRSASR
TPEKKPSSAGGGRAAHRSTSRSPSRSRSPAPRSRTPPPRSRSRTPPPSSPVPARKQSPSR
SRSPSVESQH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgtgtgtttatcggccgtttgagcccccacgcccgtgagagagacgtg
gagaaattcttcaagggatatggacggatccgagaagtaaatttgaaaaacggattcggc
tttgtggagtttgacgaccacagagatgcggatgatgccgtatatgagctgaatggcaag
gaactctgtagtgaaagggtgacgatagagcatgcccgctccagaagagggaggggtggt
ggaccagggatgggggggggtggtggcggaggaggacgcttctcacctcgtttcagcagc
taccgccagggctctggcggtcatagtggtggctccagtaggtatggtcccccggtgcga
acggagcacagaatcattgtggagaacctgtcgtcacggatcagttggcaggacttgaaa
gacctgatgaggaaagccggagaagtcacctttgtggatgcacacagaaccaacaagaat
gaaggggtggtggagttcgcatcacacagtgatatgaagaatgccattgataagctggac
ggaacggacttgaatggacgcaagttgaaactgtctgaggatcgcaagagccgccacagc
aggagtcgttcccgcggctctcgtagctactcccggtcccgtagccgttccccacgctcc
aagtcccgtagcaggagtcgtaaccgctccaggagcccccgatctcgctcggccagccgt
accccggagaagaagccttcttctgcaggagggggcagggctgcacatcgctccacctcg
cgctctccgtcccggtccagatctcctgcccctcgctcccgtacccctcccccacgctcc
cgttctcgcactcctcctcccagttcccctgtcccggcccggaagcagtctccgtcccgg
tctcgctccccctcggttgagagccagcactga
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