Oncorhynchus tshawytscha (Chinook salmon): 112247715
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Entry
112247715 CDS
T05605
Symbol
sync
Name
(RefSeq) uncharacterized protein sync isoform X1
KO
K10377
syncoilin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112247715 (sync)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
112247715 (sync)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF3450
DUF6988
Baculo_PEP_C
Rota_NSP3
Motif
Other DBs
NCBI-GeneID:
112247715
NCBI-ProteinID:
XP_042151011
UniProt:
A0AAZ3NW02
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Position
LG13:complement(5399736..5408237)
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AA seq
792 aa
AA seq
DB search
MGMEDQETELPMDPEICFDPLFIDEEDKYGDDGVEEETGASFQPLLGDTRTDTVLTGSAH
SQSSLSDTCRETHLDETRARFKDMDTMFRSRVGETTDSFGSHLSTTAQINTHLSGLGQIQ
PHLSGLGQIQPHLSGLGQIQPHLSGLGQIQPHLSGVGQIQPHLSGLGQIQPHLSGLGQIQ
PHLREMDDLLKSCEDMTGVSIASCLSTMYTDTHLSGPAQNQNQSDIQKMVAMMGSCGGNE
CHTGGSILNHTDTHVEESRNHCQSHLKEVESILDQSGATGAAVQPQLPPLTAAGTQLSGT
MAEYQTELMAMLAMLENCMEEAGITFDPLEWTYPSLPKGYGQPNPNMKKLTQDRHMERGV
ATQGHKESVGCVDMKPYLGSTFGQFEPPSYQAISTERHSDELGDCGDTHTRGSMSTVVCD
EDTEGHVSGVSVWDTEAHIIWAQQLETGLGGVEMRGSVQELEVLGTVLEGCIEEVEKLEK
RRNELMGELQALREEKTGTEEGSEGGQAAQLSQVLNIEADGRREVRMREWQSLRAERSEE
QRRLSSVRLERQGLQEEMRRLKRRLFSVARECAHNQVTLATQQREVAQLNKEQLELDALI
IKLTEEVSQLRSTHQSQLSTLQSQLQTHSQTPNPIEEMTQSKRNSCGELQQYLQGGLKAL
EERYEPMLLALLKRREGTSEALVKARQQAQELRARRGPLREEGQRLGLQRACLEERLKLT
ETHRREDVEQYKETVDRLEETSREQKMELQIQKRKTKEMEELRDSLTKEVYLYRGIVEGH
NKNDLTSVREET
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgggcatggaagaccaagagactgagctgccgatggacccagaaatctgcttcgatccg
ctgttcatcgacgaggaagataagtatggggatgatggtgttgaagaggagacaggcgct
tcattccagcctctactgggagataccagaacagacacagtcctgacgggctcagctcac
agtcagtcctccctatcggatacctgcagagagacacacctggatgagacacgagcccgg
ttcaaggacatggacaccatgtttagaagtcgtgtcggagaaacaacagactcttttggg
tctcacctgtcgacgacggcccaaattaacacacaccttagtgggttaggacagatccag
ccacaccttagtgggttaggacagatccagccacaccttagtgggttaggacagatccag
ccacaccttagtgggttaggacagatccagccacaccttagtggggtaggacagatccag
ccacaccttagcgggttaggacagattcagccacaccttagtgggttaggacagattcaa
ccacacctgagggagatggatgacctattgaagagttgtgaggacatgacaggtgtctcc
atcgcctcctgcctgtccaccatgtacacagacacacacctgtctggaccagctcagaac
cagaaccagtcagacatacagaagatggttgctatgatggggagctgtggtggtaatgag
tgtcacacaggtggatccatcctgaaccacacagacacacacgtggaggagtctaggaac
cattgccaaagtcacctgaaggaggtggaatccattttggatcagagtggagccacagga
gccgctgtccagcctcagttgcctcctcttactgccgcaggcactcagctgagtggcact
atggctgagtatcagaccgagctaatggcgatgctggccatgttagagaactgtatggag
gaggcagggattacctttgaccctttagagtggacttaccctagtttacccaaaggatac
ggccaacccaaccccaacatgaaaaagttaacacaagacagacacatggagagaggagta
gcaacacaaggacacaaggagtctgtgggatgtgtggatatgaagccatatttgggaagt
acctttggccaatttgagcccccaagctaccaagctatctccacagaaagacactcggat
gagttaggagactgtggagatacacacacaagagggtccatgtccacggtggtgtgtgac
gaggacacagaaggacatgtctccggtgtttctgtgtgggacacagaggctcacattatc
tgggctcaacaactagagacagggctgggaggggtggagatgaggggatccgtgcaggag
ttggaggtgttgggtactgtgctagaggggtgcatcgaggaggtggagaaactggagaag
agacggaatgaactgatgggagagctgcaggcactgagagaggagaagacggggacagag
gaagggagtgaaggagggcaggcggcacagttaagccaggtgctgaatattgaggcagac
gggaggagggaggtgcggatgagggagtggcagtctttgagggctgagaggagtgaggag
cagaggaggctgtccagtgtgcgtctggagaggcagggtcttcaggaggagatgaggagg
ctgaagaggaggctgttctctgtcgccagggagtgtgctcacaaccaggtcaccctggca
acccagcagcgtgaggttgcccagctaaacaaagaacagctggaacttgacgcactgatc
atcaagctgactgaggaggtgtctcagcttcgctccacccaccagtcccagctctccact
ctgcagtcccagctccagacccacagccagacacccaaccccatagaggagatgacccag
agcaagaggaactcctgtggagagttacagcagtacctgcagggggggctcaaagccctg
gaggaaaggtatgagccaatgctgctggccctgttgaagcggagggaggggacgtcagag
gccctggtgaaggccaggcagcaggcccaggagctgagggcccgccgggggcccctgagg
gaggagggacagaggctggggctgcagagagcctgcctggaggagagactcaaactgacg
gagacacacaggagagaggatgtggagcagtataaggagacagtggacaggctggaggag
actagcagagagcagaagatggagctacaaattcagaagaggaaaaccaaggagatggag
gaattgagagacagtcttacgaaagaagtctacctgtacagaggcatcgtcgagggccat
aacaagaatgatctaaccagtgtgagggaggaaacatga
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