Oncorhynchus tshawytscha (Chinook salmon): 112247727
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Entry
112247727 CDS
T05605
Name
(RefSeq) liprin-alpha-2-like isoform X1
KO
K26226
liprin-alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112247727
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112247727
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Crescentin
Motif
Other DBs
NCBI-GeneID:
112247727
NCBI-ProteinID:
XP_042153893
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All DBs
Position
LG15:4159112..4386389
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AA seq
1312 aa
AA seq
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MMCEVMPTISEDTALSQRGSQSSTSDPDSHFEQLMVNMLDERDRLLDTLRETQESLGMSQ
QHLEDVIYDRDSLQRQLSSALPQEFAALTKELNVCRENLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVS
LERVSALEEELTSANQEIVALREQNAHIQRKVASGDGSEDMLEGTDASQKVHSKRLSNGS
MESAHEASQVVELQDLLEKQNYELAQMKERMSSLSSRVSEVEQELDTARKDLIKTEEMST
KYQRDIKEVRREAMCQKEDMEERIVTLEKRYLSAQRESTSLHDISDKLENELANKEAFLR
QMEDKNRQLLERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEERMRH
LEGQLEEKHQELLRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNV
LIQDSEGYRKQYEDSIHEKTHLADEIDKLRSELDQFRLRTGSLTEPTLSRYGSHLDTSGE
LRFSLGSLAETQSDHYRSAKVIRRPRRGRMGLHRDESKAKSLGEHEWRSQQLGILGSHPF
ESEMSDMSDIDDDDRETMFSSMDLLSPGGHSDAQTLAMMLQEQLDAINKEIRLIQEEKES
TELRAEEIENRVASVSLEGLNLARMHHPGASITASATASSLASSSPPSGHSTPKLDHRST
TDMERMGIMTLPSDLRKHRRKIAATDDDGQDKATIKCETSPPPTPRTVRMTRTLPASSHN
EARGIAANLEAEASALSSVASSQDSINKQPKKKGIKSSIGRLFGKKEKTRLAQLHAHREA
IGQSQGVSDPDLGQDMAVGKLGTQAEKDRRLKKKHELLEEARRKGLPFAQWDGPTVVAWL
ELWLGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEMVSLTSP
SAPPTSRTPSGNVWVTHEEMETLAAPSSKTRSGESEEGSWAQTLAYGDMNHEWIGNEWLP
SLGLPQYRSYFMECLVDARMLDHLTKKDLRVHLKMVDSFHRTSLQYGIMGLKKLNYDRKE
LERRREHSQHEMRDVLVWSNERVIRWVQSIGLKDYANILLESGVHGALVALDDNFDHTSL
ALLIQIPNQSTQARQILEREYNNLLALGTERRLDEYEDNDLRGPSWRRQFPPRDVHGISM
MPGSAETLPAGFRVTTGSHSRRLPPEVLYEALDDSPDDMYLDWFQGQIYWSDTMWPAVGL
CAFTPPKIPRFLLSTLPYLFSSPTVFSLYLYCSVPLFCSAPDANYKGGRLLL
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggacacggcgctgagccagcggggctcc
cagagcagtacctcggacccagactcccactttgagcagctgatggtcaacatgctggat
gagagagaccgcctgttggacacgctgagggagacccaggagagcctggggatgtcccag
cagcacctggaggacgttatctacgaccgggactcactgcagcgccagctcagctccgcc
ctgccacaggagtttgcagccctgaccaaggagctgaacgtgtgcagagagaaccttctg
gagaaggaggaggagatctctgagctcaaggccgagaggaacaacaccaggttgcttctg
gagcatctggagtgcctggtgtccaggcatgagcggtcactacgtatgactgtggtcaag
cggcaggcccagtccccctcaggcgtgtccagtgaggtggaggtcctcaaagcgctcaag
tccctgttcgagcaccacaaagctctagacgagaaggtgagggagagactgcgggtgtcg
ctagagagggtctctgcattggaggaggagctaacatcagccaaccaggagattgtggcc
ttacgggagcagaatgcccacatccagaggaaggtggcgtcaggggacgggtcagaggac
atgctggagggcactgatgccagccagaaggtacatagcaagcgcctgtccaacggctcc
atggagtcggcccatgaggccagccaggtggtggagctgcaggacctgctggagaagcag
aactatgagctggcccagatgaaggagcgcatgtcctccctgtcatcccgcgtctccgag
gtggagcaggagctggacaccgcgcgcaaggacctcataaagacagaggagatgagtacc
aagtaccagagggacatcaaagaggtgaggagagaggctatgtgtcagaaggaggacatg
gaagagaggatcgtcactctggagaagcggtacctcagcgcccagagagagtccacctcc
ctgcatgacatcagtgacaaactggagaatgagctggccaataaggaagccttcctcaga
cagatggaggataagaacaggcagctgctggagcgtttggagctagcagagcagaagctc
cagcagaccatgagaaaggctgagaccctgccagaggtggaggctgaactggcccagagg
atagcagcactcaccaaggcagaggagcgtcacggcagtattgaggaacgcatgaggcac
ctggagggccagctggaggagaagcaccaggagttgctcagagctcggcagagagaaaag
atgaacgaggaacacaacaagcgcctgtcggacacggtggacagacttctcacagagtcc
aacgaacgtcttcagctccacctgaaagagaggatggctgctctggaagagaagaacgtt
ttaatacaagactcggaaggctacagaaaacagtacgaggattcaatccatgaaaaaact
catctggcagatgagatagacaagctgagatcagagttggaccagttccgactgagaaca
ggctcactcacagaacccactctgtcacggtatgggtctcacctggacacgtcgggggag
ctccgtttctcccttggctccctggctgagacccagtcagaccactaccggtcagccaag
gtcatccgcaggcccaggagaggacgcatgggtctccacagggacgagagcaaggctaag
tcactgggggagcacgagtggcgctctcagcagttaggcatcctgggtagccaccccttt
gagagtgagatgtctgacatgtcggacattgatgacgatgaccgggagaccatgttcagc
tccatggacctgctgtcccccggcggtcactcagacgcccagaccctagccatgatgctg
caggagcagctggacgccattaacaaagagatacgactgatccaggaagagaaggagtcg
acagagctacgggcggaggagatagagaaccgcgtggccagcgtcagcctcgagggtctc
aacctggcccgtatgcaccaccccggagcctccatcaccgcctcggccaccgcctcctcc
ctggcctcttcctccccgcccagcggacactccacccccaagctggaccaccgcagcacc
acagacatggagcgcatgggtatcatgacactgcccagtgatctgaggaaacacaggaga
aagattgcggctaccgacgatgacggccaggacaaggctaccatcaagtgtgagacgtcc
cctcctcctacgccccggaccgtacgcatgacccgcacactgccagcctcctcacacaac
gaggcccgaggcattgctgccaacctggaggcagaggccagtgctctgagcagcgtagcc
agcagtcaggactccatcaacaagcagcccaagaagaagggcatcaagtcctccatcgga
cgcctgtttggcaagaaggagaagaccagactggcacagctgcatgcccacagggaggcc
atcgggcagagccaaggagtatctgatccagacctgggtcaggacatggctgtggggaag
ctggggactcaggctgagaaagaccgccgtctgaaaaagaagcacgagttgctggaagag
gcgaggaggaaaggcttacctttcgcccaatgggacggccccacagtggtggcctggctg
gagctgtggctggggatgcccgcctggtacgtggcggcgtgtcgtgccaacgtgaagagc
ggtgccatcatgtcggccctgtcggacacagagatccagagggagattggcatcagtaac
cccctgcaccgcctcaaactacggctggccatccaggagatggtgtccctcaccagtcca
tctgccccgccaacctccagaaccccgtcaggcaatgtatgggtgacccacgaggaaatg
gagaccctcgcagcaccctcctccaaaacgaggtccggggagtccgaggaggggagctgg
gcgcagactctagcttatggtgacatgaaccatgagtggatagggaacgagtggttgccc
agtctaggactacctcagtaccgcagctacttcatggagtgcctggtggacgcccgcatg
ctggaccacctcaccaagaaggacctccgggtgcatctcaaaatggtggacagctttcac
aggacgagtttgcagtatggtatcatgggtctgaagaagctcaactatgacaggaaagag
ctggagagacgcagagagcacagccagcatgaaatgagagacgtgctggtgtggagcaac
gagcgggtgatacgctgggtccagagcatcggcctaaaggactatgccaacatcctgctg
gagagcggcgtgcacggggccctggtcgccctcgacgacaactttgaccacaccagcttg
gcgctgctcatccagatccccaaccaaagcactcaggcacgtcagattctggagagggaa
tataataacctgctagccctgggcactgagagacgactggacgagtatgaagataatgac
ctccgggggccatcgtggaggaggcagttccccccgcgggacgtccatgggatcagtatg
atgcccggctcggcagagaccctccccgctggcttccgcgtcaccaccggctcacactcc
cgtaggctaccccccgaagtgctctatgaggcgctggatgacagtcctgacgacatgtat
ttggactggtttcaaggtcagatatactggagcgataccatgtggcctgctgttggcctg
tgtgcctttacgccccccaaaattccccggttcctgctgtccaccctaccgtacctcttc
tcttctccaactgtcttctctctctacctctactgctctgttcctctgttttgttctgct
cctgatgccaactacaagggtggccgtttgttattgtag
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