Oncorhynchus tshawytscha (Chinook salmon): 112247734
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Entry
112247734 CDS
T05605
Name
(RefSeq) PDZ and LIM domain protein 7-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112247734
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112247734
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
112247734
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
112247734
NCBI-ProteinID:
XP_042182089
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All DBs
Position
LG08:87363164..87484446
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AA seq
388 aa
AA seq
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MSGGPHNDKEAMNIYCITLNGPAPWGFRLQGGKDFSMPLTVSRLTPGGKAAQAGVGVGDW
VVSIGETNAEDMTHVEAQNKIRAAEESLTLTLSKALHAGGDQKMDEKDDQAFFDHPIYQH
ENVKASLSPAKAQTQTADKPDASKTSATVTAGPLVRPPWVTDPGFADRYAPDKTSTVLTQ
HRQPAQPTPMQNRSSILQAAQQAPEDSGRTPLCGACNKIIRGRYLVALGQSWHPEEFQCS
QCKVMLDEGGFFEEKGSIFCSKCYDNRYAPNCAKCKKTIIGDIMHALKMTYHVHCFMCAA
CKSPIRNQAFYMEEGEPYCERDYEKMFGTKCHGCDFKIDAGDRFLEALGYSWHDTCFVCA
FCQINLEGKTFYSKKDKPLCKGHAFSPV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggtccccataatgataaggaggccatgaatatatactgtataaccctcaac
ggcccggcaccatggggcttcagacttcagggggggaaggacttcagcatgcccctgact
gtgtccaggctgacccccgggggtaaggccgcccaggccggtgtgggcgtgggagattgg
gtggtgtccatcggagagaccaacgcagaagacatgacccatgtggaggcacagaacaag
atcagagcagcagaggagtctctcaccctcaccctcagcaaagctctccatgcgggtggc
gatcagaagatggatgagaaagatgatcaagctttctttgatcacccgatttaccaacac
gagaacgtcaaggcctctctgtcacctgctaaggcccagacccagacagcagacaaacct
gacgcctctaagacttcagctacagtcacggctggtcctctggtacgtcctccgtgggtg
accgacccagggttcgctgaccgttacgccccagacaagaccagtacggttctgacccag
cacaggcagccggcccagccaacgcccatgcagaaccgctcctctatcctacaggcggct
cagcaggcacccgaggacagcggaaggacccctctctgtggagcctgcaacaagatcatt
aggggccggtacctggtggctctgggtcagtcctggcacccagaagagttccagtgttcc
cagtgtaaggtgatgttggatgagggaggattctttgaggagaaaggctcaatcttctgc
tccaagtgttatgataaccgctacgctcccaactgtgccaaatgcaagaagacgatcata
ggggatatcatgcatgctctgaagatgacctaccatgtccattgtttcatgtgtgctgcc
tgtaagagccccatcagaaaccaggccttctatatggaggagggagaaccttactgtgag
agagattatgagaagatgtttggtactaagtgtcatggctgtgactttaagatcgatgct
ggggaccgcttcctagaggccttgggatacagttggcacgacacctgcttcgtctgcgct
ttctgccagatcaacctggaaggaaagaccttctactctaagaaggataagccgctgtgt
aaaggccatgccttctctcctgtctga
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