Oncorhynchus tshawytscha (Chinook salmon): 112247795
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Entry
112247795 CDS
T05605
Name
(RefSeq) platelet-derived growth factor D-like
KO
K05450
platelet derived growth factor C/D
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04020
Calcium signaling pathway
otw04510
Focal adhesion
otw04540
Gap junction
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112247795
04020 Calcium signaling pathway
112247795
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112247795
04540 Gap junction
112247795
09142 Cell motility
04810 Regulation of actin cytoskeleton
112247795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112247795
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Growth factors (RTK binding)
112247795
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
112247795
NCBI-ProteinID:
XP_042152330
LinkDB
All DBs
Position
LG13:79296563..79390379
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AA seq
367 aa
AA seq
DB search
MNSSGRVALALLLALLVGFTRGTQGHVVSAKVVRSSNVRQHDLYRKEEVVTVTATGGVIQ
SPRFPNAYPRNLQLSWKLLSPHNTRITLEFDSHFALEEPENEVCRYDFVEVEDISETSTI
VWGRWCGQRVPPRLTSKTNTLKVSFKSDDYFVAKPGFKLHFSLQDDSLPAVSKTNWETVA
LMEDSLSVLAPAVTDVPLTAAALDQSIAAFNTVEQLLRHLNPDSWRQDLDSLYRETAMYR
PRAYQHNRQNKIDLDRLYDDVKRYSCTPRNYSVNLREELRATNAVFFPRCLLVQRCGGNC
ACGTDNWNSCTCSPAKTSDKLHEVLKYAPEVGGYSRRQTVRVSWALEEVHLTHHERCDCV
CPSRPPR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaacagctctgggcgcgtggcactggcgctgttgctcgcgctgctcgtgggctttacc
cggggcacacaaggccatgtagtgtccgccaaggtggtgcggtcttctaacgtgaggcaa
catgacttgtaccggaaagaagaggtcgtcacggtaacggcaacaggaggagtcatccag
agcccccgctttcctaacgcctatcccaggaacctgcagttgtcatggaaactactgtcg
ccccacaacacccgcatcaccctggagtttgactcccactttgcactggaggaaccagag
aacgaagtctgcagatatgactttgtggaggtggaggacatctcagagaccagtactatt
gtctgggggagatggtgtggtcagagagtcccccctcgtcttacctccaaaaccaacacc
ctcaaagtctccttcaagtcggacgactactttgtggcaaagcctggcttcaaactccac
ttctctctacaggatgattctcttcctgcagtgtcaaagactaactgggagactgtggcc
ctgatggaggacagtctgtcagtgttggctccagcggtgactgatgttcctctgacagca
gcggcgttggaccagagcatagcagccttcaacacagtggagcagctcctccgccacctc
aaccctgacagctggagacaggacctggacagcttgtacagagagacagccatgtacaga
ccccgagcctaccagcacaacagacagaacaagattgacctggaccgtctgtatgatgac
gtgaagcgctacagctgtacacctcggaactactctgtcaacctgagggaggagctgagg
gccaccaacgccgtgttcttcccacgatgcctactggtgcagcgctgtggggggaactgt
gcctgtgggacggacaactggaacagctgtacctgcagcccggccaagaccagtgacaaa
ctacacgaggtgttgaagtatgctcctgaggtgggaggttattcacggcgtcagacagtt
cgtgtcagctgggccctagaggaggtccatttgacgcaccacgagcgctgtgactgtgtt
tgtccctccagaccaccccgctga
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