Oncorhynchus tshawytscha (Chinook salmon): 112247823
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Entry
112247823 CDS
T05605
Symbol
trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112247823 (trpm5)
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112247823 (trpm5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
DUF4508
SesA
Motif
Other DBs
NCBI-GeneID:
112247823
NCBI-ProteinID:
XP_042173879
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MPERQDTPLGALPLQRRCPRCGDVLEWSREQSALLACRCYSQLDEAVESVAEGRGRGASR
GDKERGHWAAGRVGDIDFTGTSRTRGKFVRVHSSTDPVLIYQMLTEQWGLSPPHLVVALV
GGDELAQMKPWLRDTVRKGLVKAAQSTGAWILTNGLRFGITKHLGQAVRDHSLASTSSKV
KVVAIGIAPWNMIHNRDALLAAQPDQPAVVEPQDLSHGAVYSLDCNHSHFVLVEEDPQRP
GATSEMRVKLLKHISLQRTGYGGAGSFEIPVLCLLVHGEPRILQRMYKGIGNAMPWLILA
GSGGVAHILVTLMNRGCWDMDSVQELLLDTFPSVHHSTDITNWTKLIQKILDNGHLLTVH
DPEQESSELDTVILKALVKACKSQSQEAQDFLDELKLAVAWNRVDIAKSHIFNGDVEWTA
GDLEEVMMDALVNDKPDFVRLFVDNGVCLGEFLTYGRLQELYCSVSEKSLLHLLLLKKHQ
EKQLLLKATRTPGPPHDHHKAESGDRKARFTLHEVSKVLKDFLHDSCKGFYQKLPTEKTG
KKAGRLFNNQKSLAELEERCEHPWRDLFLWAVLQNRQQMANYFWAMGPEAVAAALAGCKI
LKEMSGLESEAESARSMKEAKYEQFALDLFGECYSNSEDRAYALLVRRTRCWNQSTVLNL
ATEADAKCFFAHNGVQGFLTKIWWGAMTTDTAISKLVLSFFCPPLIWTNLIKFSDEELDS
RGGGEEQYVELDSLDTEKALLLTDNDPLDSGGPPGGVEGQSSAAVWWRFLLRRWRRFWSA
PVTVFLGNVIMYFAFLILFTYVLLLDFRPPPPAGPGAPEIMLYFWVFTLVLEELRQSFFT
DEDMSILKKFKLYVEDNWNKCDMVAISLFVIGVSCRMMKDTYEAGRTVLALDFMVFTLRL
IHIFAIHKQLGPKIIIVERMMKDVFFFLFFLSVWLIAYGVATQALLHPNDPRLDWVFRRV
LYRPYLHIFGQIPLEEIDVARMPETNCTTVIEEIIMGTLPPCPNIYANWLVILLLVIFLL
VTNVLLLNLLIAMFSYTFQVVQGNTDIFWKFQRYNLIVEYHSRPALAPPFIIISHCSQLL
LSLVKSPEPKLEQLERELPAGLDQRLMTWETVQKENYLAKLERQHLESSEERLKSTSSKV
QSLLKIVGGFKEQEKRMSSMEAQVKYCGEVLSWIAECFSQSTLKCEREAPRVPSVKATGV
TAVKAGASRDPPQNVSDKEVEPERREAKLGPSGYGANKRFPYIDQ
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgccagagagacaagacacgcctctgggggcgctaccgctgcagagacgatgcccacga
tgtggggatgtactggagtggtcacgggagcaaagtgctctgttggcctgccgttgctac
tctcagctggacgaggccgtggagagtgtggctgaaggccgaggccggggtgctagcaga
ggggacaaggagaggggtcactgggctgcaggacgagtgggggacattgacttcactggc
accagtaggacaaggggaaagtttgtgagggttcacagctccacagatccagtgttaatc
taccagatgctgacagagcagtggggactatcccctccacacctggtggtggctctggtg
gggggagacgagctggctcagatgaaaccctggctcagggacaccgtgaggaaaggactg
gtcaaggctgctcagagcacaggtgcctggatcctgaccaacgggcttcgcttcggcatc
accaagcacctgggccaggctgtccgtgaccactctctggccagcacctcctctaaggtc
aaggtggtggccatcggcatcgctccctggaacatgatccacaacagagatgctctgctt
gctgctcagccagaccagcctgccgtggtggagccccaggacctgtcccatggggcggtg
tactccctggactgcaaccactcccactttgtcctggttgaggaggaccctcagcgcccc
ggggccaccagcgaaatgagggtcaagctgctcaagcatatctccctgcagcgcactggt
tatggaggtgcaggcagctttgagatcccagtgctgtgtctcctggtgcatggagaacct
cggatcctacagaggatgtataagggcatagggaacgccatgccctggctgatactggcg
gggtcggggggtgtggcccacatcctggtcacgctgatgaaccggggctgctgggacatg
gacagcgtgcaggagctcctgctagacacctttcccagcgtgcaccacagcactgacatc
actaactggaccaagctgatccagaagatactggacaacggccacctcctgacagttcat
gaccccgagcaggagagctctgagctggacacagtcatcctcaaagctttggtcaaagcc
tgtaagagccagagtcaggaagctcaggacttcctggatgagctgaagttggcggtggcc
tggaaccgggtggacatcgctaagagccacatcttcaatggggacgtcgagtggacggca
ggtgacctggaggaggtgatgatggacgcgctggtcaatgataagcccgactttgtgcgt
ctatttgtggacaacggcgtgtgtctgggtgagttcctgacctacggccgcctgcaggag
ctctactgctccgtgtcagagaagagcctccttcatctcctcctcctgaagaagcaccag
gagaaacagctcctactgaaggctacacggacccctggacccccccacgaccaccacaag
gccgagtccggggaccggaaggcccgcttcaccctgcatgaggtgtccaaagtgctgaaa
gatttcctgcacgactcgtgtaaaggcttctatcagaagctgcccacggagaagacaggc
aagaaggcagggcgtctctttaacaaccagaagagccttgctgagttggaggagcgctgt
gagcacccctggagggacctgttcctctgggctgttctccagaaccggcagcagatggct
aactacttctgggccatgggtcctgaagctgtagctgcggctctagctggttgtaagatc
ctgaaagagatgtctggcctggagtcagaggcagagtcagcacgcagcatgaaggaggcc
aagtatgagcagtttgccctagatctgtttggggaatgctactctaacagtgaagacagg
gcctatgctcttctggtgagaaggacccgctgctggaatcaatccaccgtcctcaacctg
gcaaccgaggctgacgccaagtgcttcttcgcccacaatggagttcaggggttcctcact
aagatctggtggggggcgatgactacagacacagccatctccaaactggtgctgtctttc
ttctgtccccctctcatctggaccaacctcatcaagttcagtgatgaggaactagacagt
cgtggtggaggagaggagcagtatgtggaactagacagtctggacacagaaaaggccctg
ctactaacagacaatgaccctttagactcggggggtcctcctggtggcgtggagggccag
agcagcgccgccgtgtggtggcgtttcctgctgcgtcgttggcgtcgcttctggagtgcc
ccggtcactgtgttcctaggcaacgtcatcatgtactttgccttcctcatcctgttcacc
tacgtgctcctgctggactttcgtcctccgccccccgcgggccctggggcccctgagatc
atgctctacttctgggtcttcaccctggtgctggaggagctgagacagagtttctttaca
gatgaagacatgagcatcctgaagaaattcaagctgtacgtggaggacaactggaacaag
tgtgacatggtggccatctcactcttcgttatcggtgtgtcctgcaggatgatgaaagac
acgtatgaggcggggcgaacagttctggcgctggacttcatggtgttcacactgcgtctc
atccacatcttcgccatccacaagcagctggggcccaagatcatcattgtggagaggatg
atgaaggatgtgttcttcttcctgttcttcctgagtgtgtggctcatagcgtacggcgtg
gctactcaggcccttctccaccccaacgacccgcgcctagactgggtgtttcgcagggtc
ctgtatcgaccctacctgcacatctttggccagatcccattggaggagattgatgtggca
cggatgcccgagaccaactgcaccacggtgatagaggagatcatcatgggaactctgccc
ccttgtcccaacatctacgccaactggctggtcatcctactgctggtcatcttcttactg
gttaccaacgttctgctgctcaacctcctcatcgccatgttcagctacacattccaggtg
gtgcagggcaacacagacatcttctggaagttccagaggtacaacctgatcgtggagtac
cacagccggcccgccttggccccgcccttcatcatcatcagccactgttcccagctcctc
ctcagcctggtcaagagtcctgagcccaaactggagcaactagagagggagctgcctgca
ggtctggaccagaggttgatgacctgggagacagtacagaaggagaactatctggccaaa
ctggaacggcagcatctggaaagcagtgaggagagactgaagagcacctcttccaaggtt
cagagcttattgaagatagttggaggattcaaggagcaagagaagcgaatgtcatccatg
gaagctcaggtgaagtactgtggggaggtgctgtcctggatcgctgagtgcttttcccag
agtacactcaagtgtgagagagaggcccccagagttccatctgtcaaggctactggtgtc
acagctgtgaaggccggcgcttccagagatccccctcagaatgtgtcagacaaggaggtc
gagccagagaggagagaggctaaactaggcccctcaggatacggagccaacaagaggttt
ccttacatcgaccaataa
DBGET
integrated database retrieval system
