Oncorhynchus tshawytscha (Chinook salmon): 112247864
Help
Entry
112247864 CDS
T05605
Name
(RefSeq) nectin-1-like isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03266
Virion - Herpesvirus
otw04514
Cell adhesion molecule (CAM) interaction
otw04517
IgSF CAM signaling
otw04520
Adherens junction
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
112247864
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
112247864
04517 IgSF CAM signaling
112247864
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112247864
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112247864
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112247864
04090 CD molecules [BR:
otw04090
]
112247864
Cell adhesion molecules [BR:
otw04515
]
Immunoglobulin superfamily
Nectin family
112247864
CD molecules [BR:
otw04090
]
Proteins
112247864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
ig
I-set
Ig_PVRIG
Motif
Other DBs
NCBI-GeneID:
112247864
NCBI-ProteinID:
XP_042165271
UniProt:
A0AAZ3Q0P4
LinkDB
All DBs
Position
LG30:complement(52351933..52373883)
Genome browser
AA seq
508 aa
AA seq
DB search
MENSVLWIFLTATCVIKGVCSQSVQMEAGQSGFVGSKVDLPCLFINSIPPVKISQVTWQK
VINGKKQNVAIANPSLGVSVAPPFKDRVSFKNPVVRRRTPSLEDTTLTFSSLRLSDEATY
ICEYTTFPAGNRENTVNLTVYARPLTQMSLSTPTLVARSSNLKTPVATCLSANGKPPGTI
RWDTRVRGEATTQEIRNSDGTITVRSDFILVPSKNTHLEKLTCITSYNQETYTDSVTLDI
QCFLNSDMIGLKDEPEVSVEGFDGNWYLDRQNVELTCLTDANPPVSLFQWRMLNGSIPNS
VEIRDNVLLFKGPIRYEVGGIYVCDATNSIGTSSAFMEISITEEPLPQVGTGDVFSVLGM
LLAVGLILGVAITVLLLNRRKPRGEMDADSTDSAPSLKLAPPPARRKPGDEFQRSGRVYE
DLPNTADYVSYRLACNKDDYPEPYSPPINPPLSLPDSPPINPPLLPLPARLHPLQQYLLP
RLPSLLCLQISFPPLPIPPSRPCTLHLP
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggagaattctgtgttgtggatattcctgacagcaacatgtgttattaaaggtgtgtgt
agtcagtcagtccagatggaagccggacagtcaggcttcgtgggctctaaggtggatcta
ccatgtctttttatcaacagcatcccacctgtcaagatctcacaggtgacatggcagaag
gtgattaatggaaagaaacagaacgtggcgatagctaacccgtctctaggcgtgtctgtg
gctccgcccttcaaagacagagtcagcttcaaaaaccctgtggtgcggaggagaactccg
tccctggaggacaccactctgaccttctcgtctctgcgactgtctgacgaggccacatac
atctgtgaatacactaccttccctgctggcaaccgcgaaaacacggtcaacctcacagtc
tacgcccgacctttgacccagatgagtttgtcgacacccacactggtagctcggtcatcc
aatctgaagacgccggtcgccacctgcctctcggccaatgggaagcctccaggaaccatc
aggtgggacacgcgtgtgcgtggtgaggcgaccacccaggagatccgtaactctgatggg
acgatcacggtacgaagtgacttcatcctggtacccagcaagaatacacatctggagaaa
ctcacctgtatcacctcctataaccaggagacatacacagactctgtcacgctggacata
cagtgctttctgaacagtgacatgatcggcctgaaagatgaaccagaggtgtcagtggag
gggttcgatgggaactggtacctggaccgtcagaacgttgagctcacatgtctgaccgat
gccaacccacctgtctctctgttccagtggagaatgttgaatggttccataccgaacagc
gtagagatccgtgacaatgtcctgttatttaaaggaccaatcagatacgaggtaggaggg
atttatgtctgcgatgcaaccaatagcatcgggacaagctccgccttcatggagatcagc
atcacagaagagccactgccccaggtgggaacgggtgatgtcttcagtgttctgggcatg
ctattggctgtggggctgattctgggcgtggcgatcactgtgctgcttcttaacaggaga
aaaccgaggggagagatggatgctgactcgacagactctgctccttctcttaaactggct
cctcctcctgccaggagaaaacctggtgatgagttccagcggtcagggagggtgtatgag
gacctccccaacacagcagactatgtcagctaccgactggcctgcaacaaggatgactac
ccagaaccctactctccccccatcaaccctcccctctccctccccgactctccacctatc
aacccccctctccttcctctcccagcacgcctacacccactccaacaataccttctcccc
cgcctcccatccctcctctgtcttcagatatccttccctcccctccctatccccccctcc
cggccttgcaccctacaccttccctaa
DBGET
integrated database retrieval system
