Oncorhynchus tshawytscha (Chinook salmon): 112247870
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Entry
112247870 CDS
T05605
Name
(RefSeq) atlastin-1 isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112247870
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112247870
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
Motif
Other DBs
NCBI-GeneID:
112247870
NCBI-ProteinID:
XP_024272446
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Position
LG08:6917073..6937963
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AA seq
564 aa
AA seq
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MARNRKDRDSWGSFTDKATYDWSSEEEEPDGRARPIQVLVVKDDHTFELDEVALSRILLA
EEVHNREVVAISVAGAFRKGKSFLMDFMLRYMYSQASEEWLGEAEAPLIGFSWRGGSERE
TTGIQIWSEVFLVDKPDGRKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYNIS
QNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFGYGQEGGMKFLEKR
LKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPNFDGRLKEIDREFINNLQI
LVPWLLSPKNLDVKEINGSNITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEANNLAA
VAAARDLYNKKMEQVCGGDRPFLAPAELQARHSDIREEALQVFRGVKKMGGEEFSRRYLL
QLEGEVDEVFNQYIKHNDSKNIFHAARTPATLFVVIFIMYVAAGITGFVGVDIIASVCNM
ILGLTLITLCTWAYIRYSGEYRELGQVIDQVAGALWDQGSTNEALYKLYNAAANHGHLYH
HAFSGPQAREEGAEAPEKPTRMRN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaaccgtaaagacagagacagctgggggtccttcacagacaaagccacctac
gactggagctcagaggaggaggagcctgatggaagggcgcggcccatccaggtgcttgtt
gtcaaggacgaccacacctttgagttggacgaggtggcgctgagtcggatcctattggcc
gaagaggtccacaacagggaagtggtggccatatctgtggccggggcgttccgcaagggc
aagtccttcctcatggacttcatgctgcgttacatgtacagccaggcgtctgaagagtgg
ttgggggaggcagaggcgcctctgatagggttctcctggaggggtggatctgagagggag
accaccggcattcagatctggagcgaagtgttcctggtggacaagccagatggacgcaag
gtggctgttctactgatggacacccagggaacgttcgacagccagtcaacgttgagggat
tcagctactgtgtttgcactaagcactatgatcagctccatgcaggtgtacaacatctcc
cagaatgtccaggaggatgatcttcaacacttgcagctcttcactgagtatggcagactt
gctatggaggaaacgttccttaaaccattccagtccatgatattcctggtccgggactgg
agttttccctacgagttcggctacgggcaggaaggaggcatgaagttcctggagaaaaga
ctcaagatctcagagaaccaacatgaggagctgcagaacgtccgtaaacacatccactcc
tgcttcaccaacatctcctgcttcctgatgccccaccccggactcaaagtggccaccaac
cccaacttcgacggcagactcaaagagatcgaccgtgagttcatcaacaacctgcagatc
ctggtcccgtggctgctgagtcccaagaacctggatgtcaaggagatcaacggcagcaac
atcacctgcagaggcctgctggagtacttcaaggcatacatcaaaatctaccagggggag
gagctgccacacccgaaatccatgctgcaggccacagcagaggccaacaacctggcagca
gtggccgcagccagggacctgtacaacaagaagatggagcaggtgtgtggtggggaccgg
cccttcctggccccagcagagctccaggccagacacagtgacatcagagaggaagccctc
caggtgtttcggggggtcaagaagatgggaggggaggagttcagccgacggtacctgcta
cagctggagggagaggtggacgaggtgttcaaccagtacatcaagcacaacgactccaag
aacatcttccacgccgcccgcaccccggccacgctgttcgtggtgatcttcatcatgtac
gtggcggcggggatcactggcttcgtgggggttgacatcatcgccagcgtgtgtaatatg
atactgggcctgacgttgatcaccctgtgtacttgggcctacatacgctactctggggag
taccgagagctgggtcaggtcatcgaccaggtggctggagcactctgggaccagggaagc
acaaatgaggcgctgtataagctgtataacgctgcagccaatcacgggcacctgtaccac
catgcgttctctggtccccaggcccgcgaagagggggcggaggcccccgagaaacccacc
aggatgaggaactga
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