Oncorhynchus tshawytscha (Chinook salmon): 112247886
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Entry
112247886 CDS
T05605
Symbol
dmxl2
Name
(RefSeq) LOW QUALITY PROTEIN: dmX-like protein 2
KO
K24155
rabconnectin-3a
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112247886 (dmxl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112247886 (dmxl2)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112247886 (dmxl2)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
112247886 (dmxl2)
RAVE complex
112247886 (dmxl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
112247886
NCBI-ProteinID:
XP_042173566
LinkDB
All DBs
Position
Unknown
AA seq
3076 aa
AA seq
DB search
MHLHQVLTGAVNPGDCCYSVGSVNDIPFTAYGSGCDIVILASDFECVQIIPGAQNGNIQV
GCVECSHQLGRIAASYGNTVCIFEPFSTNPNKRHKQLNYQWRKTGQFFLNAITYNLAWDP
QGNRILAATEHLQLWAPPSADTLIEEEDGPVTDDKPHPALNDWKCVWQCKTAMSVHITKW
SPDGEYFATAGKDDCLLKVWYPTTGWRSAVVLPDLPDKKGPQVHFSFIYLAHPRSVTGLS
WRKTSKYMPKGSVCNVLLTSCEDGVCRLWSETVLPEDSILGGQITENTYSSSLPGLGGKD
KIQHALESMSHLKHLRRGRRRSSALVSHTELLPSQMGTHETHTHRHISHHANTLCHFHIS
ASINPATDIPAVLAESAVFTPEDGSGGGGFVVHWLNNKDLSFTTSMDLFMLQLRKLSEQQ
LDQATDDALDQNGSPIKFDFDLDEMSEKGSSEHEEGEGGEGSTKASSPGSSSSVPLPSML
LERKMEALTLEWNKSPDMLFTIHPTDGSFLVWHVKYLDEYIQGIFRQVQVSFSSRIPVAF
PTGDANSLSKNILMYACSFSNVDSSNAGGEQGRRARRLPRSASAGLGSSALSLSLGQAPG
IGPAVMMVSKHVDGSLNQWAVTFAERSAFSNVLTVSHTFRYCGHRFHLNDQACHTVLPLL
LTSSHHNALLTPPSAPGSIDLDQPPTHTPPPRGRRRKQLRNAATRTFHDPNAIYSELILW
RVDHIGPLSCTGGVSELARINSLHTSAFSNVAWLPTLVPSSVLGTYCNSSSACFVASDGK
NLRLYQAVVDARKLLDELSDPETSKLVGEVFNIVSQQSTARPGCIIELDVITNQCGSTTQ
LLHVFQEDFILGYTPQEDPELYTTSYPSLEEYHPTPFSEKFFLVVIEKDLNMNSVLQMWH
LHLQSVQACVDDPVPERSYQSQLTIPFQQSTADTSPSPLPRSASTANLQSASKLILSSKL
VCSHRLDLPVGVEVTRATPSAGHLSSSSIYPVCLAPYLIVTTCSDSRVRFWRCSVEGGET
TLGCEEGENRIYHWEPWALLNEEEDNNSAVCVPGRPVAVSCSYTGRLAVSFKQPRPGHIP
GQGHGPAGDFSMHVSIFECESTGGSEWVLEQTLHLDDFTRPSSTLDPRVSVDSNLFVYSR
SDLYMSRDHHSPNIKHYVHLDWLSKEDGSHILTVGVGSNILMYGRISGVVNEQTSSKDGV
AIITLPLGGSIKQGIRSRWILLRTVDLLSSVDGTPSLPVSLSWVRDGILVVGMDCEMHVY
AQWRQDRKPGEAEGDSLSSEDNIAGGVGGGGGQTATNATTGGSSLAFKGRPRSKSVFEGN
VAIDEALQAPAGLHEGGLFEAAHSLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCI
AGEVAVVRDVEAGEGGTRRHLSRTISVSGSTAKDTIVAGRDGGRDYTEINSIPPLPLYAL
LSADLDTSYKGGEEGAKGGKVSEVEGARKTGGDQYTDLFQLQAVTTDDFVSFATEKVEKK
SRFINLSQYGPTYFGPEHAQVLSSQLMHSSLPGLTRLEQMFLVALADTVATTSSEVSSST
DKQYTGGEALDECGLRYLLAMRLHTCLLTSLPPLYRMQLLHQGLSTCHFAWAFHSEAEEE
MLNMIPAMQRGDPQWSELRAVGVGWWIRNINTLRRMVEKVGKAAFQRNNDPLDAALFYLA
MKKKAVLWGLFRSQRDEKMTVFFKNNFSEDRWRKAALKNAFSLLGKQRFEQAAAFFLLAG
SLKDAIEVCLEKMEDIQLAMVVARLYEADYESSSTCQAILYEKVLGCQRDGSGYHCTKLH
PDPFLRSIAFWIMKDYTKALDTLLECIPKEDDENPDVMVKSCNPVVFSFYNYLRTHPLII
RRHYASPEGAVTSSLGLTSEKSSVDEINLIERKLFFTTANAHFKVGCPVLALEVLSKIPK
VTKKSVSSSPLSKGSSMANVSSSLPLENGNQGALDWASPAPVKANPAWGTEESSATLDWS
QPLVKVEDDGLQLDWGDDKNDEDDTDGGLTMKKTDVETKADEDATYFQNHLCSQGESEVD
VIAEQLKFRACLKILMTELRTLATGYEVDGGKLRFQLYSWLEKEIGAMHRICNYKVTGKE
ESQELERWEDGGVEDVFEESLGGGGGTEAGAYERHQLGRRRLAAKQLHAERRKAWLRKNQ
ALLRVFLSYCSLHGAKGGGVTSVRMELIFLLQESQQETTVKQLQXPLPLPTTLPLLSASI
ATTKTVISNPVLHLSNHIHDILHTITQMELPPHPDLMDDRVNLLHTLAASLSACIYQALC
DSHSYSSQAEANQFTGMVYQGLLLSERRRLRTESIEEHVTPTSAPAQWPGVSSLIALVQS
AQGEDQPKLNVLLCEAVVAVYLSLLIHGLGMHAGNELFRLAAHPLSNKMWAAVFGGGAKI
IIKPKRNAEITPAVPAPPPAEDVDRLRRRFNMRMLVPGRPVKEVPATPPPVPAERPAYRE
KFIPPELSMWDYFVAKPFLPLSDSGALYDSDESGEEDDDDDDDDAFLSDTQMTEHSDPNS
YSWSLIRLVMVKLALHNVKTFLPLTGLDFTDLPVTSPLGNAVLKTLENWETQLQERMNKF
DGPPPNYINTYPTDLSTGGGPAILRHKAMLEPDNTPFKNKNHISFPARRLWHYLVKQEVL
QETLIRYIFTKKRKQSECVEGYMDLLSPNCVSGALRSNKVEGDLGYPGRNAKIIHKESDI
IMAFAINRANTNEIVLASTHDVQEVDVSTLLAAQPYTWIGEDFDKESHSSDDVDYRSSHT
NVAQASSTPSHFNPKDMAASASMPWLGSGQTSMGASVIMKRNLNNVKRMTSHPIFQYYMT
GAQDGSVRMFEWNRPQQLICFRQAGNARVTRLYFNSQGNKCGVSDGEGFLSLWQVNQTSS
NPKPYVSWQCHSKTCGDFAFITSSSLIATAGQSNDSRNVCLWDTLISPSNAMVHAFPCHE
NGATVLQYAPKQQLLISGGRKGFVCVFDIRQRQLLHTFQAHDSAVKALALDTSEDFFVTG
SAEGNMKVWKLAGHGLMHSFSTEHAKQSIFRNIGAGVMQVETRPGNRIFTCGADGTLKMR
VLPDRYNIPSSIFDIL
NT seq
9231 nt
NT seq
+upstream
nt +downstream
nt
atgcatctccaccaggtgctaacgggagctgtgaaccccggtgactgctgctattctgtg
gggagcgtcaacgacattcctttcaccgcctatggttcaggctgtgatatagtgatcttg
gccagtgattttgagtgtgttcagatcatccctggggctcaaaatggcaacatccaggtg
ggctgtgtcgagtgctcccaccaactgggcaggattgcagcgtcctatgggaacacagtg
tgtatctttgaaccattctctaccaacccaaacaaacgccacaagcagcttaactaccag
tggagaaagacaggacagttcttcctaaatgctatcacctataacctggcctgggaccca
caagggaaccgtattctggcagctacagagcacctgcagctgtgggcccctccgtcagca
gacacactgatagaggaggaggatggacccgtgaccgatgacaaacctcaccctgccctc
aacgactggaagtgtgtttggcagtgcaagactgctatgtctgttcacatcaccaagtgg
tctcctgatggggaatactttgcaacagccggcaaggatgactgtctgttgaaggtgtgg
taccccaccactgggtggcgctctgctgtggtgctgccagacctcccagataagaaaggc
cctcaggtccacttctcctttatatacctggcccacccccgctctgtcaccggcctgtcc
tggaggaagaccagcaaatacatgcccaagggtagtgtgtgtaatgtgttgttgacgtcg
tgtgaggacggtgtgtgtaggttgtggtctgagacggtgctgccagaggacagtatcctg
ggtggtcagatcactgagaacacatacagctccagcctgccaggcctggggggcaaggac
aagatacagcacgccctggagtcgatgagccacctgaagcacctgcgtcgtggtcgtcgg
aggtcgtctgctctggtgtctcacactgagttgctgccgtctcagatggggacccacgag
acacacacacaccgccacatctctcaccacgctaacactctctgtcatttccacatctct
gccagcatcaaccctgccacggacatcccagcggtgctagcggagtctgccgtgtttact
ccggaggacgggagtggaggaggagggtttgtggtccactggctcaacaacaaggacctg
tccttcaccacctccatggacctgttcatgctgcagctccgcaagctctcagaacagcag
ctggaccaagccactgacgacgccctcgaccagaacggctcccccattaagtttgacttt
gacctagatgagatgtcagagaagggttcatcagagcatgaggagggtgagggtggtgag
ggcagcaccaaggcgtcgtccccaggctccagtagctcagtgcccctgccctccatgttg
ctggagaggaagatggaggcgttaactctggagtggaataagagtcctgacatgctgttt
accatccaccccaccgacgggtccttcctggtctggcacgtcaaatacctggacgagtac
atccaggggatcttcagacaggtgcaggtgtcgttctcgtcccgtatcccggtggcgttc
cctacaggcgacgccaactccctgagtaagaacattctgatgtacgcctgctccttctca
aacgtggatagctccaacgccgggggagagcaggggaggagggcccgccgtctgccccgt
tctgcctctgctgggctgggttcctcagccctcagcctctctctgggccaagctccaggc
atcggccctgctgttatgatggtgtccaaacatgtggacgggtctctcaatcagtgggcg
gtgacgttcgctgagcgctcggcgttctccaacgttctaactgtgtctcatacgttccgt
tactgcggtcaccggttccacctcaacgaccaggcgtgtcacaccgtcctacccctactg
ctgacctcctcccaccacaacgctctcctcacccctccctccgcccccggcagcatcgac
ctcgaccagccacccacacacacacctccccccagaggacggcgcaggaagcagctgcgt
aacgcggccaccaggacgttccatgacccgaacgccatctacagtgagctgattctgtgg
agggtggaccacataggacccctatcctgcactggaggagtgtcagagctggcccgaatc
aactccctgcacacatcagccttctccaatgtagcatggctgcctacccttgtacccagc
tctgtgctaggtacatactgtaacagttccagtgcgtgcttcgtggcgtcagacggtaag
aacttacgtctctaccaggctgtggtggacgccaggaaactactggacgaactgtcagac
cctgagacctcaaaactagtaggagaggtatttaacatagtgagccagcagtcgacagcc
agaccaggctgcatcatagaactagatgtcatcactaaccagtgtggatctaccacccag
ctccttcatgttttccaggaggactttattttggggtatacacctcaggaggacccagag
ctctacactacatcctacccttctctcgaggagtaccaccctactccgttctctgagaag
ttcttcctggttgtcatagagaaggacctgaacatgaactctgtgctgcagatgtggcac
ctgcacctccagtccgtacaggcctgtgtggatgatccggtcccagagcgttcttaccag
tctcagctgacgatcccgttccaacagagtacagctgacacgtccccctcccctctccct
cgctcagcctccacagccaacctgcagtcagccagcaaactgatcctcagctccaagctg
gtctgtagccaccgcctggacctgcctgttggggtggaggtgaccagggctacgccctcc
gcaggtcacctgagttcgtcgtccatctaccctgtgtgtctggccccctacctgatcgtc
accacctgctctgactcccgcgtccgtttctggcgctgttctgtggaggggggagagaca
accctggggtgtgaggagggggagaacaggatctatcactgggagccttgggctctactc
aacgaggaggaggataacaacagtgctgtgtgtgtgccgggacgtcctgtagccgtgtcc
tgttcctacactggacgactggctgtctccttcaaacagccccggcctggacacatcccg
ggacagggccatggtccagcaggggacttctccatgcacgtgtccatctttgagtgtgag
tctacgggggggtctgagtgggtgttggagcagactctccatctggatgacttcactagg
ccctcctctaccctggaccccagagtcagtgtagactccaacctctttgtgtacagcagg
tctgacctgtacatgagtcgcgaccaccactctcccaacatcaaacactatgtccacctg
gactggctgtccaaagaggatgggtctcatatcctcacggtgggggtgggatccaatatc
ctcatgtacggtcgcatctcgggcgttgtcaacgaacagacctcaagcaaggacggggtg
gcgatcatcaccctacctctagggggcagcatcaaacagggtatccgttcacgctggatc
ctgctgcgcactgtggacctgctctcctctgtagacggcaccccctccctgcccgtgtcc
ctgtcctgggtgagggacggcatcctggtggtgggtatggactgtgagatgcacgtgtac
gcccagtggcgccaggaccgcaagcccggtgaggcagagggggacagcctctcctctgaa
gataacatcgccgggggggttggagggggcggagggcagacggccaccaatgcaaccacg
gggggatcctcgttggcgttcaaggggcgcccccggtccaagagtgtgtttgagggcaac
gtggcaatcgacgaggctctccaggcgccggcagggctgcatgaggggggtctgttcgag
gcagcccactccctgtcccccaccctgcctcagtaccatccaacacagctgctggagctc
atggacctggggaaggtccgccgcgccaaggccatcctgtcccacctggtgaaatgtatc
gctggggaggttgctgtggtgagggacgtggaggcaggtgagggtggaaccagacgccac
ctgtcccggacaatcagtgtgagcggcagtacggctaaagacaccatcgtggccggccgc
gacgggggacgagattacacagaaatcaactccattccccctctacccctctacgctctg
ctctctgctgacctggacacctcctataagggaggagaggagggggcgaagggaggcaag
gtgtctgaggtagagggggcgaggaagacaggaggagatcagtacacagacctgttccag
ttgcaggctgtgacgacggatgactttgtgagcttcgctacagagaaagtagagaagaag
tctagattcatcaacctgtctcagtacggacccacctacttcggaccagaacacgcacag
gtgttatctagtcagctgatgcattccagtcttccaggtctgaccaggttggaacagatg
tttctggtggctctagctgatactgtagctaccaccagttcagaggtcagcagctccact
gacaaacagtacacaggtggtgaggccctggatgagtgtgggttgaggtacctgttagcc
atgcgtctacacacctgtctcctcacctctctacccccactgtaccgcatgcagttgctg
caccaaggtctgtctacgtgtcactttgcgtgggcgttccactcggaggctgaggaggag
atgttgaatatgatcccggccatgcagagaggagaccctcagtggtctgagctacgggct
gtaggggtgggctggtggatacgcaacatcaacacactacgcaggatggtggagaaggtg
ggtaaagcagcgttccagaggaacaacgatcctttagatgcagctctgttctacctggcc
atgaagaagaaggctgttctctggggcctgttcaggtctcagcgtgatgagaagatgacg
gtgttctttaagaataacttcagtgaggaccgctggcgtaaagcagctctgaagaacgct
ttctctctgctggggaaacagcgctttgaacaggctgctgccttcttcctgctggctggc
tccctgaaagacgccatcgaggtgtgcttggagaagatggaagatatccagttggccatg
gtagtagccaggctgtacgaggctgactatgagagcagttccacctgccaagccatcctg
tatgagaaggttttgggctgccagagggacgggtcagggtaccactgcaccaaactacac
ccggacccattcctacgcagcatagccttctggatcatgaaggactacaccaaagccctg
gacacactgctagagtgcatccccaaagaggatgatgagaacccagatgtgatggtgaag
tcgtgtaacccagtggtatttagtttctataactacctgaggacacaccccctgatcatc
cgccgccactacgcgtcccctgagggtgctgtgacatcatcactaggcctcacctcggag
aagagcagtgtcgacgagatcaacctcatcgaacgcaaactcttcttcaccaccgccaac
gcacacttcaaggtgggctgtccagtgcttgccctggaggtgctctctaagatccccaag
gtgaccaagaagtcagtctcctcatcccccctaagtaaaggctcttccatggccaatgtc
agctctagcctgcccctggagaatgggaaccagggggccctggactgggcctctcctgcc
ccagttaaggccaatcctgcctggggtacagaggagagctcagccacactggactggagc
cagcctctggtcaaagtggaggacgatggactccagctggactggggagatgataagaac
gatgaagatgatactgatgggggtctgacaatgaagaagactgatgtggagaccaaagct
gacgaggatgctacatatttccagaaccatctctgctctcagggtgagtctgaggtggac
gtgattgcagagcagctgaagttcagagcgtgtctgaagatactgatgacagagctcagg
acgttagctacgggttatgaggtggacggagggaagctgcgctttcagctttacagctgg
ttggagaaggagataggggccatgcaccgcatctgcaactacaaggtgacggggaaggag
gagagccaggagctggagagatgggaggatggaggagtagaggacgtgtttgaggagtcc
ctggggggtggcggaggtacggaggcgggggcgtatgagcgccaccagctggggcgtagg
cgtctcgcagccaagcagcttcatgctgagaggaggaaggcgtggctgaggaagaaccag
gctctgctccgagtcttcctgtcctactgcagcctgcacggagccaagggagggggggtc
acctcagtacgcatggagctcatcttcctgctgcaagagagccaacaggagactacagtg
aaacagctccagntccccctgcccctccccaccaccctccccctcctctcagccagtatc
gccaccaccaagacagtgatctccaaccctgtcctccaccttagcaaccacatccatgac
atccttcacaccatcacacagatggagctgcctccacaccctgacctcatggacgacagg
gtgaatctcctgcacaccctggctgcctctctgtctgcctgcatctatcaagccctgtgt
gacagccatagctacagcagccaggcagaggccaatcagtttacagggatggtgtaccag
ggcctgctgctgagtgagaggagacggttacgcacagagagcatcgaggagcatgttaca
cccacctctgcccccgcgcagtggccaggtgtgtcctctctgattgctctggttcagtca
gctcagggcgaggatcagcccaagctcaacgtgttgctgtgtgaggctgtggtggcagtt
tacctgtccctgctcatccatgggttgggcatgcacgctggcaacgaactattccgcctc
gctgctcaccccctcagcaacaagatgtgggcggccgtgtttgggggtggggctaaaatc
atcatcaaaccgaaacggaacgccgagatcactccagccgtgccagcccctcccccggca
gaggatgtggatcgactcagacgacggtttaatatgaggatgctggttcctggtcgtcca
gtaaaggaggtccctgccaccccccctcccgtccctgcagagagacccgcctacagggag
aagttcattcctccagagctcagcatgtgggactactttgtggccaaacccttcctgccc
ctgtcagacagtggagctctgtatgactcagatgagagcggagaggaggatgacgacgac
gatgatgatgatgctttcctctctgacacacagatgactgaacactctgaccccaactca
tacagttggtctctgatccgtctggtcatggtgaaactggctctacataacgtcaagacc
ttcctccctctcactggactggacttcacagacctgccggtgacgtctcctctggggaat
gctgtgctgaagacactagagaactgggagacccaactccaggagaggatgaacaagttt
gatggtcctcctcccaactacatcaacacctaccccactgacctcagcacaggagggggg
cccgccatactgagacacaaggccatgctggagcctgacaacacacctttcaagaataag
aaccacatttcgttccctgcgaggcgtctctggcactacctggtgaaacaggaagttctt
caggagactctgattcgctatatcttcactaagaagaggaagcagagcgagtgtgttgaa
ggctatatggatctcctcagcccaaactgtgtatctggagctctcaggtccaacaaggtg
gagggagacttaggctacccaggaaggaatgctaagatcatccacaaggagtctgacatc
atcatggccttcgccatcaacagggctaacaccaatgagatagtgctggcgtccactcac
gacgtgcaggaggttgatgtgtccactctgttagctgctcagccctacacctggatagga
gaggactttgacaaggagtcacacagttctgatgacgtggactaccgttcttcccacact
aacgttgcccaggcctcctctaccccgtcccacttcaaccccaaagacatggcagcctct
gcatccatgccctggctggggagtgggcagaccagcatgggtgctagtgtgattatgaag
aggaacctgaacaatgtgaagagaatgacctcccaccccatattccagtactatatgact
ggggctcaggacggcagtgtccgtatgtttgagtggaacaggccacagcaactcatctgc
ttcagacaggcaggcaatgccagagtcacacgcctctacttcaactcacagggaaacaag
tgtggtgtatcagatggagaaggcttcctcagtctgtggcaggtcaaccagacctcctcc
aaccccaagccctacgtgagttggcagtgccactctaagacctgtggtgattttgccttc
atcacttcctccagtctcatcgcaacggcaggacagtccaacgacagcagaaatgtctgc
ctgtgggacactcttatttcacctagtaacgccatggtacatgccttcccgtgccatgag
aacggtgcgacggtgttgcagtacgctcccaagcagcagctgctgatctcgggaggcagg
aagggctttgtgtgtgtgtttgacatccgacagagacagctgctacacaccttccaggcc
cacgactcagccgtcaaagccctggcgctcgacacctccgaagacttcttcgtaaccggc
tcggctgaggggaacatgaaggtgtggaagctggcaggccatggcctcatgcactcgttt
agcacagagcatgccaagcagtccatcttccggaacatcggagcaggcgtcatgcaggtg
gagacccgccccggcaaccgcatattcacctgcggcgccgacggaaccctcaagatgagg
gttctacccgaccgctacaacatcccctctagcatcttcgacattctgtag
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integrated database retrieval system
