Oncorhynchus tshawytscha (Chinook salmon): 112247888
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Entry
112247888 CDS
T05605
Name
(RefSeq) paired box protein Pax-6-like isoform X1
KO
K08031
paired box protein 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112247888
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112247888
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
112247888
NCBI-ProteinID:
XP_024272459
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Position
LG19:43482117..43503865
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AA seq
467 aa
AA seq
DB search
MPQKEYYNRATWESGVASMMQNKVYDYNEGHSGVNQLGGVFVNGRPLPDTTRQKIVELAH
SGARPCDISRILQTHGDAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVAT
PEVVGKIAVYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSLSVSSINRVLRNLASEKQ
QMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNPDGCPQSDGGGENTNSISSNGE
DSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ
VWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPIPQTTAPGWMSFSSGSM
LGRPDTALTNTYSALPPMPSFTMANNLPMQAPVSSQTSYSCMLPTSPSVNGRSYDTYTPP
HMQAHMNSQSMAGSGGNSTGLISPGVSVPVQVPGSEADMSQYWPRLQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccgggccacgtgggaatctggcgtcgcgtccatgatg
caaaacaaggtgtatgactataacgaaggtcacagcggagtgaatcagcttggcggagtg
ttcgtcaacggcagacccctgcccgacaccaccagacagaaaatagtcgagcttgctcac
agtggcgcgcggccgtgcgatatatccaggattctgcagacccatggtgatgcaaaagtt
caagtgctggacaatgaaaacgtgtcaaacggctgtgtgagtaagattctgggcagatac
tatgaaaccggctccatcagaccaagggcgatcgggggtagcaaaccaagagtagcaact
cccgaggtggtcggaaaaattgcagtatacaagagggagtgcccgtcaatcttcgcgtgg
gaaattcgtgacagactgctatccgagggggtctgcacaaacgataatatacccagtgta
agttcattgagtgtgtcgtcgataaacagagtactgcgcaacctggctagcgagaagcaa
cagatgggcgcagatggcatgtatgagaagttgagaatgctgaacggtcagactgggacg
tgggggacccgcccgggctggtaccccggaacctcagtgccaggacagcccaacccagat
ggttgtccacagtcagacggtggaggtgagaacactaattcaataagttcgaatggagaa
gactcggatgagacccaaatgagacttcagctcaaaagaaaattgcaaaggaaccgcact
tcgttcactcaagaacagatagaagcgcttgagaaagagtttgaaagaactcactatcca
gatgttttcgcaagagaaagacttgctgcaaaaattgacctcccagaggccagaatacag
gtgtggttttcaaatagaagggcaaagtggaggagggaggagaaactacggaatcaaaga
cgacaagccagtaactcttccagtcacatccctatcagcagcagtttcagcaccagtgtc
taccagcccatcccacagaccacagcaccaggttggatgtcgttctcatcaggatccatg
ttgggaagaccagacacagcccttacaaacacatatagtgccctgccacctatgccaagc
ttcaccatggccaacaacctgcctatgcaagcccctgtgtccagccagacctcctactcc
tgcatgctgcccaccagtccctcagtcaatggacggagctacgacacgtacacccctcct
catatgcaggcacatatgaacagccaatcaatggctggttcaggaggcaactcaacaggt
ctcatctctcctggagtatctgttcctgttcaagtcccaggcagtgaagcagacatgtcc
cagtactggcccaggctacagtag
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