Oncorhynchus tshawytscha (Chinook salmon): 112247947
Help
Entry
112247947 CDS
T05605
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112247947
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112247947
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112247947
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
112247947
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112247947
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112247947
Prokaryotic type
112247947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
112247947
NCBI-ProteinID:
XP_042163848
LinkDB
All DBs
Position
LG03:complement(4249830..4276651)
Genome browser
AA seq
699 aa
AA seq
DB search
MLVTVMLRFPVCRPSVRAVLHCQRPFSKIQASTALSERVRVFESLRERQGQQRTSGTTKQ
AFSVRLADGRTVNGTTGVTTPSIIAQNAWLASQTFVKGALVCRVNGELWELLRPLEADCE
LQLLGFNTTEGKQAVWRTGACVVGWVLERVFGVEVCREGVSESGLYCDHLLENSALSLAE
LEDRCKEAAGQKLPLSRLELNRQEVTELFQDNALRLQLVEEQMSGPTVTVYRCGDSIGVC
NGPLLPNTGLLKVFKMLQVSPVTLTNPVGMSGVMRVMGVAFPGEREREEWEREQEETRKR
DHRRIGKDQELFFFNDVSPGSCFFLPKGAHIYNTLADFIKTEYRRRGFHEVVTPTLYSTA
LWERSGHWEHYSENMFTVTGDTHTYALKPMNCPAHCLMFEQRVRSWRELPLRWADFGALH
RNELSGALGGLTRVRRFCQDDAHIFCTPEQLEEEIIACLNFVRSVYRVFGFSFHCLLSTR
PTPCLGEPALWDHAEQQLERSLQQFGERWQFNPGDGAFYGPKIDIQIKDAIGRQHQCATI
QLDFQLPIRFDLHYVGGDGETHRPVMVHRAVLGSLERMIAILAENFSGKWPLWLSPAQVM
IIPVGGGSESYAKQVVRQFREAGFMADTDDDHGATLNKKIRSAQLAQYNYIFVVGEKECV
SGTVSVRTRGGKQLGRRPTEKVLASLTHLRDARSNQDDF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgaccgtgatgttacggtttcccgtctgtcggccgtcagttcgggcagtgctt
cactgtcagaggccctttagcaagatacaggcatccactgctttgtctgagcgcgtgcgg
gtctttgagtctctcagagagaggcagggacagcagaggacaagcggcaccacgaaacag
gccttcagcgtccgattggctgatggcaggacggtgaatggcaccacaggcgtgaccacg
ccctcaatcatcgctcagaacgcatggttagcctctcagacatttgtgaaaggtgctctg
gtctgcagggtgaatggagagctgtgggagctgcttcgccccctggaggctgactgtgaa
ctacagctgctaggcttcaacaccacagagggcaaacaggcggtgtggaggacaggagcg
tgtgttgtggggtgggtgttagagagggtgtttggggtggaagtgtgcagagagggcgtg
tcagagtccggcctctactgtgaccacctcctggagaacagtgccctgtccctagctgag
ctagaggatagatgtaaggaggccgctggccagaagcttcctctctccagactggagctg
aacaggcaggaagttacagagctcttccaggacaatgctctgagactccagttggttgaa
gaacagatgagtggtcctactgtcacagtctacaggtgtggagacagcataggagtctgc
aatggtcctctcctccctaacactggtctcctcaaggtcttcaagatgctgcaggtgtct
cccgtaacgttgaccaatcctgttggcatgtcaggcgtgatgcgtgtgatgggtgtggcc
ttcccaggagagagggagagggaggagtgggagagggaacaggaggagacacggaagaga
gaccacagacgcatcggcaaggaccaggagctgttcttctttaatgacgtcagtcctgga
agctgcttcttcctgcctaaaggagctcacatctacaacacactcgctgactttatcaag
actgagtacaggaggcgtggcttccatgaagttgtgacccctactctatacagcactgca
ctgtgggagcgttcgggtcactgggaacactacagtgaaaacatgtttactgtgaccggt
gacacacacacctatgcactcaaacccatgaactgtcctgcacattgtctgatgtttgag
cagcgtgtaaggtcatggagggagctcccgttgcgttgggccgatttcggggcactgcat
cggaacgagctgtccggcgctctgggtggtctcacccgggtccgcaggttctgccaggac
gacgcacacatcttctgcactcccgaacagttggaggaggagatcatagcgtgtttgaac
tttgtgaggagtgtgtatcgagtttttggattctccttccactgtctcctctccacccga
cctacaccctgcctgggggagcctgcactgtgggaccatgctgagcagcagttggagagg
agtctgcagcagtttggagagcgctggcagttcaacccaggagatggagcgttctacggg
ccgaagattgacatccagatcaaggatgccattggtcgacagcaccagtgtgccaccatc
caattggacttccagctaccaataagatttgacctacactatgtggggggggatggagag
acccacaggccagtgatggtccacagagctgttctgggatcactggaacgcatgatcgct
atattggctgagaatttttcggggaaatggcctctgtggttgtctccagcgcaggtcatg
attattcctgtagggggaggtagtgagtcgtatgcgaaacaggtggtccgacagttccgc
gaggccggcttcatggctgacacggatgatgaccatggtgccaccttaaataagaagatc
cgctctgcacagctggcccagtacaactacatatttgtggtaggtgagaaggagtgtgtg
agtggcacggtgagtgtaaggaccagaggggggaagcagctagggaggagaccgacagag
aaggtcctggcatcactcacacacctacgagacgcacggagcaaccaggatgacttctaa
DBGET
integrated database retrieval system
