Oncorhynchus tshawytscha (Chinook salmon): 112248088
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Entry
112248088 CDS
T05605
Name
(RefSeq) sorting nexin-1-like
KO
K17917
sorting nexin-1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112248088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112248088
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112248088
Membrane trafficking [BR:
otw04131
]
Endocytosis
Macropinocytosis
Sorting nexins
112248088
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112248088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
FAM92
YgaB
Motif
Other DBs
NCBI-GeneID:
112248088
NCBI-ProteinID:
XP_042173425
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MAASSRRNPPPLPGAENQDPLSEMAGEDSDEGEDIFVGNSNPVAEAFQPDTANGEEPADL
FSEAETSTAVNSSITTSKSNGVHSDNENDLFAEVSVELSMENPSTTAKSSGAEFTPSLTL
SATQPESMEQLEEEKDEDSFDMEVAVTNPEKIGDGMNAYMAYKVSTRTTLPMFRNRTFSV
WRRFSDFLGLYEKLSVKHSLNGCIIPPPPEKSVVGMTKVKVGKDDSSSADFVERRRAALE
RYLQRVVCHPSLLQDPDVREFLERDELPRAVGTHTLSGAGFLKMINRASDAVSKMTIKIS
DSDAWFDNKLQEVESEELQLRKLHAVVDSLVNHRKELCGNTAVFAKSMAMLGNSEDNTAL
SRALSQLAEVEDKMETLHQEQAASDFFILAELLADYIRLLGAVRGCFEQRMKTWQRWQEA
QSTLQKKREVEAKLLWANKPDKLQQAKEEITEWEGKVTQYERDFDRISVTVRKEFLRFEK
QKSKDFKSQIVKYLESLLQSQQRHVKFWEAFLPEAKAIA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcggctagctcacggcggaatccccctcctctccctggagcagagaaccaagaccca
ctttccgaaatggcaggtgaagacagtgacgaaggggaggatatattcgttggcaatagc
aaccctgttgcagaggcctttcagcctgacacagccaatggtgaagaaccagctgacctc
ttcagtgaagcagaaactagcaccgctgtcaacagttccatcacaacctctaagtccaac
ggtgtccattcagacaatgagaatgatctatttgcagaggtctcggtggagctgtccatg
gagaaccccagcaccacagccaagtcctctggagctgaattcaccccatcacttacacta
tcagcaacacaacctgagtctatggagcagttggaagaggaaaaggatgaggacagcttt
gacatggaggttgctgtcaccaatccagagaaaattggagatggcatgaatgcttacatg
gcctacaaggtgtccactcggactacattacccatgttcaggaacaggacattctcggtg
tggaggaggttcagtgatttccttgggctgtatgagaagctgtcggtgaagcactccctg
aacggctgtatcatccctccaccaccagagaagagcgttgtggggatgaccaaagtgaag
gtgggaaaggatgactcttcctcggctgactttgtggagaggaggagagcggctttggag
aggtacctgcagagagtagtgtgtcacccgtccctgttacaagaccctgatgtcagagag
ttcctggaaagagacgagctgcctagggcggtgggtacacacacactgagtggagctggc
ttcctgaagatgatcaacagagcatcagatgctgtcagtaagatgaccatcaagatcagc
gactcggatgcttggtttgacaacaaactgcaggaggtggagagcgaggagctgcagctg
aggaaactccatgcggtggtggactccctggtcaaccacagaaaggagctctgcgggaac
acagcagtgttcgccaagagcatggccatgctgggcaactcggaggacaacacagctctg
tcccgggccctctcccaactggccgaggtagaggacaagatggagacgctacaccaggag
caggcggccagcgacttcttcatcttggccgagctgctggccgactacatccgcctacta
ggggccgtcaggggctgttttgagcagcgcatgaaaacgtggcagcgctggcaggaggct
cagagcaccctgcagaagaagagggaggttgaggcaaagcttctgtgggccaacaagcct
gacaaactacaacaggccaaagaggagatcactgagtgggagggtaaagtcactcagtac
gagagggattttgacaggatctctgtaaccgtccgcaaggaattcctcaggtttgagaaa
cagaagtccaaggacttcaaaagccagatagtgaaatatctagagtctcttctacagtct
caacagcggcacgtaaagttctgggaagcattcctgcctgaagcaaaagcgatagcatga
DBGET
integrated database retrieval system
