Oncorhynchus tshawytscha (Chinook salmon): 112248183
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Entry
112248183 CDS
T05605
Symbol
trpm6
Name
(RefSeq) transient receptor potential cation channel subfamily M member 6 isoform X1
KO
K04981
transient receptor potential cation channel subfamily M member 6 [EC:
2.7.11.1
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112248183 (trpm6)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112248183 (trpm6)
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112248183 (trpm6)
Protein kinases [BR:
otw01001
]
Serine/threonine kinases: Other
Alpha family [OT]
112248183 (trpm6)
Ion channels [BR:
otw04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
112248183 (trpm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
Alpha_kinase
TRPM_tetra
LSDAT_prok
Ion_trans
BCLP
Motif
Other DBs
NCBI-GeneID:
112248183
NCBI-ProteinID:
XP_024272767
LinkDB
All DBs
Position
LG04:19056481..19101580
Genome browser
AA seq
1928 aa
AA seq
DB search
MDLCYDHLCAYMNAASTMSRRSWIEDTFCKRACGKFIPACRDLHRCFPMCQVCQNLIRCC
CGRLVGEHTLLETGPSMSSWPGPGTGQQEEWSVECHTQTSATDAYGTIDFQDSAGRNCHA
KYVRVAVDAKAEALLQLMRSEWQMERPKLLLTVHGGTENFPLPLKVRQAFSKGLITAAQS
TGAWILTDGINTGVSRYVGEAVKTYGTHDLRKRNAVGFTPWGVIDNHSDLIGRDVLRPYQ
PLGNPLSKRVCLNGLHSHFLLVDDGTLGKHGCQLGLRRKLERHIQLQKIHPRFNQGVPVV
CVVVEGGPDIVSMVLEYVSSVPPVPVFVFEGSGRAADLLAFLHKQTAIDSQLDTDIQEDF
LLRIGGMFGLERADASQLYNLLMECMDYRQSITIFDSESEDQQEADCAILTATLKGTKAS
PGEQLSTALAWDRADIAKKHILVYGQHWQVGSLEQAMLDALVMDRVGFVKLLIDNGMTMN
RFLTVSRLEELYNTQQGPTDNFLHILVEDVKQTHIPKGYRVSLIDVGQVIEYLIGGAYRS
TYTRKHFRAHYNLLYAHCKESGRDSSGPLNKKRRADCTLHPHQSPNSSPSRPPFFRTAQP
YKRKERSMVLRDLKLAQQQSSELGDSPLFVYNFNDLFVWAVLQRRQQMALFLWQHGEEAM
ARATVACKLYRAMAYEFRQSNMDDTTGEQLKTYSMDFGQLAVDVLDRTFRQNERMAMKLL
TSEMEAWSHFTCLQMAVSSRLRPFVSHSCTQMLLTDLWTGRLNMRKNSWFKIILSILMPP
AILLLEFKSQAEMSHVPQSQEALQFGWDTGRPEAAQEGGHTDGQDAEKGSAWWESCSAPE
ADTITPVTTQCFFWTTRLYDFYTAPVVKFWFHTMSYLVFLMLFSYTVLVKMEDRPSTQEW
LVIAYIISTAVEKTREVFMSVPRKPSQKLKVWFGEYWNVTDFLAIVLFLVGLGLRWDSGS
YRTAGRITYCLDIIFWYVRVLDLLAVNQHAGAYLTMITKMTSNMFYIVVMMAIVLLSFGV
SRKAILSPDEALSWSLLRDVVNQPYWMMFGEVYAGEIDTCAGDTPCVPGAFLTPFLQAVY
LFFQYIIMVNILIAFFNNVYFDMKSISNKLWKYNRYRYIMTYQEKPWLPPPLIILSHMTL
CVTAIYQKHRGLSEQDTDSCGLKLYLGQEELKRLHEFEERCLVSYFHEKNQDVLCSQINR
VRATAERAEEMGVVMREVSDRVHFIQDTLQVLDSQLGQLQDLSALAVDTLTLLSASDSLQ
QEEARLGHCRPITPSRHHVPHSWTLPHGGGGSVDIMPCHTPRAYRSTPPSLLWGHTSSRS
QRLSLEWHTGAWGGGDHGGQGAGESCVPSRCGSPPYPSALAIDSSLERPHSKPRVCCDPE
MSMEKEGEEFGKSFDVNVSRASSHAFLLSDTQDERGCGARGLVNPAFCKDDDPGAVHSRR
GQWGRKRPHRWAGLSRDRPYSHSRSLSSSMENMALSGVPLSQLRASFPALDCLSKGGRFT
ADIPLGCSKSREWSNWFDLAVTSGSRERCQGRKTVKILEESSSDAGKEVDSYLSDVCRKR
RRRGGEPVCWSASASPNPLNSEPMDSLQKVAFSRQQDSSQSVWTSWACSVSCRSLVQSGI
AREEDLDPHYSAMERNNLMRLAHTIPFTPVSIMAGEEVSVYTLEEVEAAGPESSISYWST
KGLSAMLQPLSSEGCLDGGLRRAMLVLCTWAERDVLRVGCVYVVKAIQPDVVCTWQRVFH
SDTTLQLCLREIQQQRAAQKLMHVFNQVKPENMPHSPRFLDMSLLHWHSDGQWLTIERNM
TGDFRKYNNNTGEEIAPCCGMEEMLLAFSHWTYQYSCRELLVLDLQGVGSELTDPSVIRA
EDKSLSDDMVFGPSNLGDAAIHSFVNKHTCNSCCENLGLSDLRRSTDIHGKTEHRPFEKE
SGLIMTRM
NT seq
5787 nt
NT seq
+upstream
nt +downstream
nt
atggacctatgttatgatcatttgtgtgcctatatgaatgcagcttctacaatgtcacgg
agatcttggattgaagataccttctgcaagagagcatgtggtaaattcatcccagcatgt
cgagacctacacagatgttttccaatgtgtcaagtatgccaaaacctaataagatgctgc
tgtggacgtctggtaggggagcacaccttgctggagactggcccttccatgtctagctgg
cctgggcctgggacagggcagcaagaggagtggtcagtggagtgccacacacaaaccagt
gccaccgatgcctacggcaccattgacttccaggacagtgctggacgtaactgccatgcc
aagtatgttcgtgttgcggtcgatgccaaggctgaggctctgctgcagctgatgcggagt
gaatggcagatggaacggcctaaactactgctgacggttcatggggggacagagaacttc
cccctccctctcaaggttagacaggccttcagcaaaggcctgatcacagcagcccagagc
actggagcctggatactcacagacggcatcaacacaggtgtgtcccggtacgtaggggag
gctgtgaaaacatatggcacccatgacctcaggaagaggaacgctgtagggttcacgccc
tggggtgtaattgacaatcacagtgaccttatagggagagatgtgctcaggccctaccag
cctctgggaaaccccttgagtaagagggtgtgtctgaacggcctgcactcccacttcctg
ttagtggacgatggaactctgggaaaacatggctgccagctgggactgaggaggaagctg
gagaggcacattcaactgcagaaaatccaccctcggtttaaccagggtgtgccagtggtg
tgtgtggtggtggagggcggccctgacattgtgtccatggtgctggagtacgtgagcagt
gtgccccccgtgcctgtgtttgtcttcgagggatcaggtcgggcagctgacctgctggca
ttcttacacaaacagactgctattgacagccagctggacacagacatccaggaggacttc
ctgctgaggatagggggcatgtttggtctggagagagcagacgccagccagctctacaac
cttctgatggagtgtatggactacagacagtctatcacaatcttcgactcggaatctgag
gatcaacaggaggcagactgtgccattttgacggccacactgaaaggcaccaaggcgtct
cctggggaacagctcagtacagctctggcatgggaccgagcagacatagctaaaaaacac
atccttgtgtatggccagcactggcaggtaggctcgttggagcaggccatgctggatgct
ctggttatggaccgggtcggctttgtcaaactgctgatcgacaacggtatgaccatgaac
cgcttcctgaccgtgtcacgcctggaagaactctataacacgcagcagggaccaacagac
aattttctccatattctcgtggaagatgtgaaacagacccatatacctaaaggatacaga
gtctccctcatagatgtggggcaggtaatcgagtatctgataggaggagcctatcggagc
acatacacacggaaacacttcagggcccactataacctcctatatgcccattgcaaggag
tctggacgggatagttcaggaccccttaacaaaaagaggagggcagactgcacccttcac
ccgcaccaaagcccaaacagtagtccatcaaggccacccttcttccgcactgctcagccc
tataaacgcaaggaaagatccatggtgctcagggacctgaagctggcccagcagcagagc
tccgagctgggtgactctccactgtttgtttacaacttcaatgacctctttgtgtgggct
gtgctgcagaggcggcagcagatggcgctgttcctgtggcagcacggggaggaggccatg
gcccgggctacagtggcctgtaaactgtaccgtgccatggcctacgagtttcggcagagc
aacatggatgacaccacgggggagcagctcaaaacctactctatggactttggtcagctg
gcggtggacgtgctggaccgtaccttcagacagaacgagcgcatggccatgaaactgctg
acttcggagatggaggcctggagccacttcacctgtctgcagatggctgtgtcctcccgg
ctccgccccttcgtctcccactcctgcacccagatgctgctcaccgacctgtggaccggc
cgcctcaacatgaggaagaactcctggtttaagatcatcctgagcatcctcatgccccct
gccatcctgctattggagtttaagagccaggcagagatgtcccatgtcccccagtcccag
gaggctttgcagtttggttgggacacgggaagaccagaggcagcccaggagggggggcat
acggatggccaggatgcggagaagggatcagcgtggtgggagagttgctcagcccccgaa
gctgacacaatcacacctgttaccacccagtgtttcttctggaccacgaggctgtacgat
ttctacaccgctcctgtcgtcaagttctggttccacacgatgtcctacctggtctttctc
atgctgttctcctacactgttttggtaaagatggaggaccggcccagcactcaggagtgg
ctggtcattgcgtatattatatccactgctgtggagaaaacaagagaggtgttcatgtca
gtgccgaggaaacccagtcaaaagctgaaggtgtggtttggagagtactggaatgtgact
gacttcctggccatcgtcctcttcctggtggggctggggctacgctgggacagcgggtcc
taccggactgccgggcggatcacctactgcctggacatcatcttctggtatgttcgggtg
ctggacctgctggccgtcaaccagcatgccggggcctacctcaccatgatcaccaagatg
actagtaacatgttctacattgtggtgatgatggcgattgtgctgctgagtttcggcgtg
tccaggaaggccatcttgtctccagatgaagctctgtcatggagcctgctcagagatgta
gtcaaccagccgtactggatgatgtttggagaagtgtacgcaggcgaaatagacacctgt
gcaggtgacacgccgtgtgtccccggtgccttcctcacccccttcctccaggccgtctac
ctcttcttccagtacatcatcatggtcaacatcctcattgccttcttcaacaatgtctac
tttgacatgaagtccatatccaataagctgtggaagtacaaccgctaccgttatatcatg
acctatcaggagaagccgtggctgcccccgcccctcatcatcctgagtcacatgaccctg
tgtgtgactgccatttaccagaaacacagaggcttgtccgagcaggacacggactcctgt
gggcttaagctttacctgggccaagaggagctgaagaggctgcatgagtttgaggagagg
tgtttggtgtcgtatttccacgagaaaaaccaagatgttctctgcagccagataaacagg
gtacgagccactgcagaaagggctgaggagatgggtgtggttatgcgcgaggtgtcggac
agggtccacttcatccaggataccctgcaggtgttggacagccagctgggtcagctgcag
gacctgtccgccctggccgtggacactctcaccctcctatcggcctccgatagcctgcag
caggaggaggcccgcctaggccactgccggccaatcaccccctcccgtcaccatgtcccc
cacagctggaccctcccccacggaggtggaggcagtgttgacatcatgccctgccacacc
cctagggcctaccgcagcacaccaccctccctgctgtggggccacacctcctcccgcagc
caacgtctgtcactggagtggcacactggggcctgggggggcggtgaccatggagggcag
ggggctggtgagtcgtgtgtgccttcccgctgtggctctcctccgtacccttcagccttg
gctatagacagttctctggaacgcccccacagcaaacccagggtctgctgtgaccctgag
atgtccatggaaaaggaaggggaggagtttgggaagtcctttgatgtgaatgtgtccagg
gcctctagtcatgccttcctgttgtccgacacccaggatgagagaggctgtggggccagg
ggtttggtgaaccccgccttctgtaaggacgacgaccctggggcagttcactccagacgg
ggccagtggggcaggaagcgtcctcaccggtgggcgggtctgtccagggaccggccctac
agtcatagccgctctctctcctctagcatggagaacatggctctctctggtgtccccctg
agccagctacgagcctccttccccgccctcgattgcctgtcgaaggggggaagattcaca
gctgacataccccttggctgcagtaaaagcagagagtggtccaactggtttgatctggca
gtgacctcagggagcagagagaggtgtcagggcaggaagacagtcaagatcctggaggag
agttcttcagacgctgggaaagaggtggactcatacctctccgacgtgtgcagaaagagg
aggcgcaggggaggagagcctgtgtgctggtctgcctctgccagccccaacccactcaat
tctgaacccatggattcattgcagaaagtagctttttcacgtcagcaggactccagtcag
tccgtgtggaccagctgggcctgctctgtcagctgcaggtccttagtgcaaagtgggatc
gcacgtgaagaagacctggacccacactactcagccatggaaaggaacaacctgatgagg
cttgctcacaccatacctttcacacctgtgtccataatggcgggagaggaggtgagtgtt
tacaccctggaggaggtggaagctgcaggcccggagtcctccatatcctactggtcaacc
aaggggctgtctgcgatgctgcagccgctgtccagcgagggctgtctagatggggggctg
cgcagggccatgctcgtactttgcacctgggccgagagggatgtcctgagggtgggctgc
gtgtatgtggtcaaagccatccagcccgatgtggtctgcacctggcagagggtcttccac
agcgacaccaccctccaactctgtctgcgggagatacagcaacagagagctgctcagaaa
ctcatgcatgtgttcaaccaagtaaaaccagaaaacatgcctcattctccaaggttcctg
gacatgtctcttcttcactggcactcagacggccagtggttgaccatcgagaggaacatg
acgggagatttcaggaagtacaataataacacaggagaggagatcgccccctgctgtggg
atggaggaaatgctcctggccttctcccactggacctaccaatactcctgcagggaactg
ctggtgttggacttacagggagtgggatcggagcttacagacccatcggtcatccgagca
gaagacaaaagcttgagtgatgacatggtgtttggtccttctaacctgggagacgctgcc
atccacagctttgtcaacaagcacacatgcaactcctgctgcgagaacctcggactctca
gatttgaggaggagcacggacatccacgggaaaacagaacacaggccttttgaaaaggag
agtggattgatcatgactaggatgtaa
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