Oncorhynchus tshawytscha (Chinook salmon): 112248184
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Entry
112248184 CDS
T05605
Name
(RefSeq) nuclear receptor ROR-beta-like isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112248184
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
otw03310
]
112248184
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
112248184
Nuclear receptors [BR:
otw03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
112248184
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF2716
Motif
Other DBs
NCBI-GeneID:
112248184
NCBI-ProteinID:
XP_024272773
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All DBs
Position
LG04:complement(19106624..19137792)
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AA seq
475 aa
AA seq
DB search
MKTDVVAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQRNCLIDR
TNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRILNERQQQTCEAE
ALARVYSSSLTNGLSTLNHEIGGTYANGHVIELPKGQVNGGATGGYYHGMDSTQPSPDQS
GLDLAGIKHIKQEPVYDLTPVANLFNYSTYQDSQLAHNNVSMGELDRIAQNIIKSHLETC
QYTADELQQLAWQTHSYDDIKMYQSKTRDVLWQQCAIQITHSIQYVVEFAKRISGFMELC
QNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVSAVFDFAK
SLCSLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHMDEDALA
KLIGRIPMLSAVCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNAAITMPK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggatgtcgtagcccaaatcgaagttataccgtgcaaaatctgtggagacaaa
tcatcaggaatccactatggagtcatcacgtgtgagggctgcaaagggttcttcagacga
agtcagcagaacaacgctgcatactcatgccctcgccagaggaactgtctgatcgacagg
accaaccgaaaccgctgccagcactgccgtttacagaagtgtcttgcactcggaatgtcc
agagatgcggtgaagtttggccgcatgtccaagaagcagcgtgacagcctgtacgccgag
gtacagaagcaccagcagcggatcctgaatgagcggcagcagcagacgtgtgaggcagag
gccctggcgcgtgtctactcctccagcctgaccaacggcctcagcaccctcaaccacgag
atcggaggcacttacgccaacggccacgtcatcgagctccccaagggccaggtgaacggt
ggtgccacgggtggctactaccatggtatggactccacccagccctccccggaccagtca
ggcctggacttggcgggcattaagcacatcaagcaggagccggtgtacgacctgacccct
gtggctaacctgttcaactatagcacctaccaggacagtcagctggcgcacaacaatgtc
agcatgggagagctagatcgtatcgcccagaacattataaagtctcacctggagacctgt
caatatacagcagatgagctgcagcagctggcctggcaaacacactcctacgatgacatc
aagatgtaccagagcaaaacgcgagacgtgctgtggcagcagtgtgccatccagatcacc
cattccatccagtatgtggtggagtttgccaagcgcatctcaggcttcatggagctttgc
cagaatgaccagatcctcctgctcaagtcaggttgtctggaggtggtcctggttagaatg
tgtcgggcatttaacccactcaacaacacagtactgtttgaggggaagtacgggggcatg
cagatgttcaaagcactaggttgtgacgacttggtcagcgctgtgtttgactttgccaag
agtctgtgctctctgcagctcactgaggaggagatcgctctgttctctgcagcagtgctc
atctccacagaccgtccatggctgatggaacccaggaaggtgcaaaagctccaggagaag
atctactttgcactgcagcacatcatgcagaagaaccacatggacgaggacgcgctggct
aagctgattggtcggatacccatgctgtcggccgtgtgtactctccacaccgaggagctg
caggccttccagcagcttcaccctgagacggtgaacgtgctcttccccccgctctacaag
gagctgttcaatcccgaccccaatgcagcgatcaccatgcccaagtga
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integrated database retrieval system
