Oncorhynchus tshawytscha (Chinook salmon): 112248190
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Entry
112248190 CDS
T05605
Name
(RefSeq) transmembrane channel-like protein 2-B
KO
K21988
transmembrane channel-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
112248190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112248190
03037 Cilium and associated proteins [BR:
otw03037
]
112248190
Transporters [BR:
otw02000
]
Other transporters
Pores ion channels [TC:
1
]
112248190
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112248190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
112248190
NCBI-ProteinID:
XP_042176359
LinkDB
All DBs
Position
LG04:complement(19477544..19505441)
Genome browser
AA seq
984 aa
AA seq
DB search
MPPRKKTDIAIKMEEVGMDIDGELDSGHEDEVRWRDRNRKVKLSPRAGGRNGKQATSEEE
EEEEDEAQSKRAHKKKAKVQDSEEEDEEEEDEAQRKRAYKKKAKVQDSEEEDEEEEKSVK
RKGPKAAGRNKKAVKQVSEEESEEEERGKKRKGRKSTIKNQKEGQNKEKKSDAKGKSDAK
GKGVKDKGNEKDKKKKNAKYSSSSSSGESGDEDSLSEGEIAAQKEEVEEKKKLIATLRNK
PWRMKRRLKLLKECQAFVEKFEGALGKGKGRKLYAYKVIIAKKMIKFNRDFDNFKTACIP
WERKIKEVESHFGSSVASYFIFLRWMYGLNLVLFGFMFGLVVLPEVMMGLPYGSIPRKTV
PRAQQAKAMDYSVLLDFGGYCKYSVLFYGYYNDERTIGLLQFRLPLSYLLVGVGIFGYSL
MVVIRTMARNSDEGGDGGDDGQFTFTFKMFTSWDYLIGNPETADNKYASITTSFKESIVD
EQENQKDENIHLRRFLRVLANLFILCSLGGSGFLIYFVVKRSQDFAKLDQNTLSWYEKNE
VEVVMSLLGLVCPPLFETIAELEEYHPRIALKWQLGRIFALFLGNLYTFLFALFDDVNEK
LEQEKYIKNATIWGLKEYYANYSTFHNTTDIPPPEIPPADVIRGPCWETDVGIEFVKLTV
SDIQVTYLTILIGDFVRAVIVRFLNYCWCWDLEAGFPSYGEFDISGNVLGLIFNQGMIWM
GAFYAPGLVGLNVLRLLSSMYYQCWAVMSCNVPHERVFKASKSNNFYMGLLLLVLFLSLL
PVVYTIMTLPPSSDCGPFSGRAQMYDVVMETIEKDLPAFIGNIFTYATNPGLIIPAVLLM
VLAIYYLNATSKNYQNANLELKRKMQMARDEEKNRRNNKESTNQVMHDLVGLLPNRSLIP
PPAEEAPPPDNMSEKGSKFPKVAKRPGAVKVKGVNLQKDVSLAAPNSREAVTRPPGPRGP
PGNARGPPPGPGRGRGRGAPPPRC
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcggaagaaaactgacattgcaattaaaatggaagaggtgggaatggacatc
gatggagagttagacagtgggcatgaggatgaggtcaggtggagagacagaaacaggaaa
gtcaaactctctccacgagccgggggacggaatggcaaacaggccaccagcgaggaggaa
gaggaggaggaggacgaggcacagagtaagagggctcataagaaaaaggccaaggtccaa
gacagcgaggaagaggatgaggaagaggaagacgaggcacagaggaagagggcttataag
aaaaaggccaaggttcaggacagcgaggaagaggatgaggaagaggagaagagcgttaag
cggaagggcccaaaagctgcaggcagaaataaaaaggcagtcaagcaggtgagtgaggag
gagagtgaggaggaagaacgagggaagaaaaggaaaggcagaaaatcgactatcaagaac
cagaaagaagggcagaacaaggagaagaagagcgatgctaaagggaaaagtgacgccaaa
ggcaaaggagtgaaggacaaagggaacgagaaagacaagaaaaagaagaacgcaaagtac
agcagctcttcttcttcgggcgagtcaggggacgaggattctctgtcagaaggggagatt
gctgctcagaaggaagaggtggaggagaagaagaagctgatcgccactctaaggaacaaa
ccgtggcgcatgaagaggaggcttaaactcctcaaggaatgccaggcgtttgtggagaag
tttgagggggctctgggaaagggcaaagggaggaagctctacgcctacaaagtcataatt
gctaagaaaatgatcaagttcaaccgtgactttgacaatttcaaaacagcctgtattcca
tgggaaagaaagattaaagaggttgagagtcactttgggtcatctgtggcttcctacttt
atcttcttgcggtggatgtacggtctaaacctggtcctgtttgggttcatgtttggtctt
gttgttctcccagaggtgatgatgggtcttccgtatgggtctatacccaggaaaactgtt
cccagagcgcagcaggccaaagccatggactactccgtcctccttgattttggaggctac
tgcaagtactctgttctgttctatggctactataatgacgaacgcaccatcggactcctc
cagttcagactgccactgtcctacctactggtcggtgttggcatcttcggctacagcctg
atggtggtcattagaacgatggcacgtaactcggatgagggaggagatggtggggacgat
ggacagtttacattcacctttaagatgttcaccagctgggattacctcattgggaaccca
gagacagctgacaacaagtatgcctccatcaccaccagctttaaggaatccatagtagac
gaacaggagaaccagaaggatgagaacatccacttgcggaggttcctgcgggttctagcc
aatcttttcattctctgcagcctggggggcagtggcttcctcatctattttgtggtcaag
aggtctcaggactttgcaaaactagatcagaatacgctctcctggtatgaaaagaatgag
gtggaggttgtgatgtcactgctggggctggtgtgcccccctctctttgagactatcgct
gagctggaggagtaccaccctcgtatcgccctcaagtggcagctgggccgcatctttgcc
ctgttccttgggaacctctacaccttcctgttcgccctgtttgatgatgtcaacgaaaag
ttggaacaggagaagtacattaagaatgccactatctggggtctgaaggagtactatgcc
aactacagcaccttccacaacactactgacatcccccctccggagatccctcctgctgat
gtcatcagagggccgtgctgggagaccgacgttggcatagagtttgtgaagctcaccgtc
tctgacatccaggtgacatatctgaccatcctcattggtgactttgtgcgagccgtgatt
gtgcgtttcctcaactactgctggtgctgggacctggaggctggatttccgtcttatgga
gagtttgacatcagcggcaacgtgcttggattaatcttcaatcaaggaatgatttggatg
ggtgcattctacgcccctggcctggtaggattgaacgtcctgcgtctcctctcctcgatg
tactaccagtgctgggccgtgatgagctgtaacgttccccatgagagggttttcaaggcc
tccaaatccaacaacttctacatgggcctcctcctcctggtgctcttcctcagccttctg
cctgtggtttacaccataatgaccctgccgccctcctctgactgtggccccttcagtgga
agggcgcaaatgtatgacgttgtcatggaaactatagagaaagacctaccagcgttcatc
ggtaatatcttcacctacgcaactaatcctgggctgatcataccagctgtgctgctgatg
gtgttggccatctactatctgaatgcgacctccaaaaactatcaaaatgccaacctggaa
ctgaagaggaagatgcaaatggctagagatgaggagaagaacaggaggaacaacaaggag
agtacaaaccaggtgatgcatgacctggttggccttcttcccaaccgttctctaatcccc
cctcctgctgaagaagcacccccaccagacaacatgagcgagaagggcagcaaatttccc
aaggtggcaaaacgtccaggagcagtcaaagtcaagggggttaaccttcagaaggatgtt
tcattggctgcaccaaactcccgagaggctgtgacccgtcccccaggcccaagggggccg
cctggaaacgccagaggaccacccccagggccgggaaggggcagagggaggggtgcacct
cctcctagatgctaa
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