KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112248224
Entry
112248224         CDS       T05605                                 
Name
(RefSeq) rap guanine nucleotide exchange factor 1-like isoform X1
  KO
K06277  Rap guanine nucleotide exchange factor 1
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510  Focal adhesion
otw04910  Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:otw00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    112248224
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    112248224
SSDB
Motif
Pfam: RasGEF RasGEF_N
Other DBs
NCBI-GeneID: 112248224
NCBI-ProteinID: XP_024272843
UniProt: A0A8C8LPT6
LinkDB
Position
LG04:17350664..17399413
AA seq 1118 aa
MSGKIESKPDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKVSKPPLEHGVKTAEKPANKSL
SRLEEQEKDVVSALRYFKTIIDKMAVDKKVLEMLPGSASKVLEAILPLVQVDARIQHSSV
VSSCLNRVYQSLGNLIRWSDQVMLEGVNLEDKETIVTVTTVIKAVLDGVKELVKLTIEKQ
EHPSPTSPVKPVPVATPPESAAEPPANEKESLDKSSATSQSMEALTEPTGEEEEEEEEVV
APPKPPLPGLKMAEHNPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPMSIGLHKQEY
EVDALQRRFSGGSHYYGGESPRISPCNSMGKLSKSDGQLSWTMDSGQCSRNTSSEALDTT
DHYDPDYDFLHQDLSSLEQMTPVPVGACLSPLPESHSESSCPGPGPPLAQLHFSSLQGCS
VTSALPPPALPEKKRRGGACSGFSDGSYSGSSWCVSFERHPSQYDNLMEEDLPPVPPFPL
FTPDILPLCHTAGGFVSEFSGSETTDVPQSPPPLPEKKSRHILKYMQFVEDYSEPQPSVF
YQMPQSKSIYEQRNKHFQEVYGFNDSFSSSDSVHEPLPPPALPPKQRQLSMDLAAPGSGS
PDPVLVANGSLDSSLAIGLLTDSSFSDTRQTSLSESANEEGGEGEYVNLYTSSQANGDGL
SRRDSSAIDDSLEDTASENPLCNNKDMSDDRRRQKSSEDGQSSEETDELSLIDHMEIMSR
LTLKQENDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEDLIKKLHYR
YTRFCHCPDTFKKKVSKNTFFVLVRVVDELCLVEMTEDILMQLMDLVFRLVCNGELSLAR
VLRTNILDKVEQRKLLRYTYSLKPLAARGVAARPGTLHDFRSHEIADQLTLLDAELFYKI
EIPEVLLWAKEQNEEKSANLTQFTEHFNNMSYWVRSIIILQEKAQDREKLLLKFIKIMKH
LRKLNNFNSYLAILSALDSAPIRRLEWQKTTSEGLEEYCTLIDSSSSFRVYRAALADVEP
PCIPYLGLILQDLTFVHLGNPDQINGKVNFSKRWQQFNILDSMRRFQQVHYDLKHNDDIV
SFFNDFSDHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq 3357 nt   +upstreamnt  +downstreamnt
atgtcggggaaaatagagagtaaaccagactcccaacgctcccatttgtcttccttcacc
atgaagcttatggacaagttccactctcccaaaatcaaaaggacaccctcgaagaaagtc
agtaagccgcctttagaacatggcgttaagactgcggagaaacctgctaacaagagtctg
agtcggttagaggagcaagagaaagacgtggtcagtgccttgcgttacttcaagaccatc
attgacaagatggcggtggacaagaaggtgctggagatgttaccaggctctgccagtaag
gtcctggaggccatcctgcctttagtccaagtggacgcaaggatccagcacagctcggtg
gtgtcctcctgtctgaaccgtgtgtaccagagtctgggcaatctcatccgttggtctgac
caagtcatgctggagggggtcaacctggaagataaagaaaccatcgttaccgtcaccact
gtgatcaaggcagtgcttgatggtgttaaggagctagtgaaactgaccatagagaaacag
gagcatccttcccccacgtctcctgtcaaaccagtgccagtggccaccccacccgagagt
gctgctgagccgcctgccaatgagaaggagagtctggacaagagctcagccacgtcccaa
tctatggaagccctgactgaacccactggagaggaggaggaggaggaggaggaggtggtg
gccccaccaaaaccccctctccctggcctcaagatggctgaacacaatcctcctgctctg
cctccaaagaagcgccagtctgccccctcacccacccgggtggcagtagtggcccccatg
agccgcgccaccagtggctccagtcttcccatgagcatcggcctccacaaacaggagtac
gaggtggatgccctgcagaggcgcttctctgggggcagccattactacggaggggagtcg
ccgcgcatatccccctgcaatagcatgggcaagctgagcaagtccgacgggcagctgtcc
tggacaatggacagtgggcagtgctcacgcaacaccagcagtgaggctctggacaccaca
gaccactacgacccggactacgacttcctgcaccaggacctgtccagcttggagcagatg
actcctgtgccagtgggagcgtgcctcagccccctgcctgagtcccacagcgagtcttcc
tgccctggccccggtccgccgctggcacaactccacttcagctccctccagggctgctcc
gtgacttccgccctgccgccccctgccctgccagaaaagaagcgcagaggtggcgcctgc
tcaggcttttccgacggctcctactcgggctcatcctggtgcgtttcctttgagcgccac
ccatcccagtacgacaacctcatggaggaggacctaccgcctgtgcccccctttcccctg
ttcacgcccgacatcttgcccctgtgccacaccgccggggggtttgtgtctgagttcagc
ggcagcgagacaacagatgtacctcagagtccaccgccactccctgagaagaagagccgt
cacatactgaagtacatgcagtttgtggaagactactcagagccccagccctcagttttc
taccagatgccacagagcaagagcatctatgagcaacgcaacaagcacttccaggaagtc
tacggcttcaatgactcgtttagcagcagcgactctgtccacgagcccctcccacccccg
gcactgccacccaaacagaggcagctgagcatggacctagcggccccgggcagtggcagc
cccgaccctgtgctggtggccaacggctctctggacagctctcttgctatcggtcttctc
actgactcttctttctctgacactcgtcaaacctctttgagcgaaagcgctaacgaggaa
ggcggggagggagagtacgttaatctgtacacatccagccaagccaacggagatgggctc
tcccgccgagactcgtctgccatagatgactcactggaggacactgcctcggagaaccca
ctgtgcaataacaaggacatgtccgatgaccgccgaagacaaaagtcgtctgaagatggg
cagagtagcgaggagacggatgagctttccctcatcgatcacatggagatcatgtcccgg
ttaacactaaagcaggagaacgatgacggtccagatgtccgagccggatcgggggatatt
ttattagtccacgccacagaaacggaccgcaaagatcttgtcttgtactgtgaggctttc
ctgacgacgtacagaacgttcataaccccagaggaccttatcaaaaagctgcactacaga
tacaccaggttttgtcactgcccagataccttcaagaagaaagtcagcaaaaacaccttc
tttgttcttgtccgtgtggtggacgagctgtgtctggtggagatgacggaggacatcctg
atgcagctgatggacttggtgttcaggctggtgtgtaacggtgagctgagcctggcccgc
gtcctccgcacaaacatcctggacaaggtggagcagaggaagctgctgcgctacacctac
tcgctcaaaccactggccgcaagaggtgtcgccgccagacctgggaccctgcacgacttc
cgaagtcatgagatcgccgaccagctaactctcctggatgcagagctcttctacaaaatt
gagatccctgaggtgttgctttgggctaaggagcagaacgaggagaagagtgccaacctc
acacagttcacagagcactttaacaacatgtcctactgggtacgctccataatcattctg
caagagaaagcccaggaccgagaaaagctcctcctcaaatttatcaaaataatgaagcac
ttacggaagctaaataatttcaactcatatttggcaatattatctgccttggattcagct
cccatccgaagactggagtggcagaaaacaacctcagagggcctagaggaatactgcacg
ttaatagacagctcctcgtcgttccgggtctaccgagcggcactggcagatgtggagccc
ccatgtataccatatctgggtcttatcctccaggacttgacctttgtccatctgggcaac
cctgatcaaatcaacgggaaggtcaacttctccaagcgctggcagcagttcaacatcctg
gacagcatgaggcgcttccagcaggtgcattatgatctgaaacacaacgacgatattgtc
tccttcttcaacgacttcagcgaccacctggcagaggaggctctgtgggagctgtctttg
aagatcaaacctcggaacattacgcggcgcaaaacagagcgcgaagaaaagacatag

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