Oncorhynchus tshawytscha (Chinook salmon): 112248224
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Entry
112248224 CDS
T05605
Name
(RefSeq) rap guanine nucleotide exchange factor 1-like isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
otw04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112248224
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
112248224
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
112248224
NCBI-ProteinID:
XP_024272843
UniProt:
A0A8C8LPT6
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Position
LG04:17350664..17399413
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AA seq
1118 aa
AA seq
DB search
MSGKIESKPDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKVSKPPLEHGVKTAEKPANKSL
SRLEEQEKDVVSALRYFKTIIDKMAVDKKVLEMLPGSASKVLEAILPLVQVDARIQHSSV
VSSCLNRVYQSLGNLIRWSDQVMLEGVNLEDKETIVTVTTVIKAVLDGVKELVKLTIEKQ
EHPSPTSPVKPVPVATPPESAAEPPANEKESLDKSSATSQSMEALTEPTGEEEEEEEEVV
APPKPPLPGLKMAEHNPPALPPKKRQSAPSPTRVAVVAPMSRATSGSSLPMSIGLHKQEY
EVDALQRRFSGGSHYYGGESPRISPCNSMGKLSKSDGQLSWTMDSGQCSRNTSSEALDTT
DHYDPDYDFLHQDLSSLEQMTPVPVGACLSPLPESHSESSCPGPGPPLAQLHFSSLQGCS
VTSALPPPALPEKKRRGGACSGFSDGSYSGSSWCVSFERHPSQYDNLMEEDLPPVPPFPL
FTPDILPLCHTAGGFVSEFSGSETTDVPQSPPPLPEKKSRHILKYMQFVEDYSEPQPSVF
YQMPQSKSIYEQRNKHFQEVYGFNDSFSSSDSVHEPLPPPALPPKQRQLSMDLAAPGSGS
PDPVLVANGSLDSSLAIGLLTDSSFSDTRQTSLSESANEEGGEGEYVNLYTSSQANGDGL
SRRDSSAIDDSLEDTASENPLCNNKDMSDDRRRQKSSEDGQSSEETDELSLIDHMEIMSR
LTLKQENDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRTFITPEDLIKKLHYR
YTRFCHCPDTFKKKVSKNTFFVLVRVVDELCLVEMTEDILMQLMDLVFRLVCNGELSLAR
VLRTNILDKVEQRKLLRYTYSLKPLAARGVAARPGTLHDFRSHEIADQLTLLDAELFYKI
EIPEVLLWAKEQNEEKSANLTQFTEHFNNMSYWVRSIIILQEKAQDREKLLLKFIKIMKH
LRKLNNFNSYLAILSALDSAPIRRLEWQKTTSEGLEEYCTLIDSSSSFRVYRAALADVEP
PCIPYLGLILQDLTFVHLGNPDQINGKVNFSKRWQQFNILDSMRRFQQVHYDLKHNDDIV
SFFNDFSDHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatagagagtaaaccagactcccaacgctcccatttgtcttccttcacc
atgaagcttatggacaagttccactctcccaaaatcaaaaggacaccctcgaagaaagtc
agtaagccgcctttagaacatggcgttaagactgcggagaaacctgctaacaagagtctg
agtcggttagaggagcaagagaaagacgtggtcagtgccttgcgttacttcaagaccatc
attgacaagatggcggtggacaagaaggtgctggagatgttaccaggctctgccagtaag
gtcctggaggccatcctgcctttagtccaagtggacgcaaggatccagcacagctcggtg
gtgtcctcctgtctgaaccgtgtgtaccagagtctgggcaatctcatccgttggtctgac
caagtcatgctggagggggtcaacctggaagataaagaaaccatcgttaccgtcaccact
gtgatcaaggcagtgcttgatggtgttaaggagctagtgaaactgaccatagagaaacag
gagcatccttcccccacgtctcctgtcaaaccagtgccagtggccaccccacccgagagt
gctgctgagccgcctgccaatgagaaggagagtctggacaagagctcagccacgtcccaa
tctatggaagccctgactgaacccactggagaggaggaggaggaggaggaggaggtggtg
gccccaccaaaaccccctctccctggcctcaagatggctgaacacaatcctcctgctctg
cctccaaagaagcgccagtctgccccctcacccacccgggtggcagtagtggcccccatg
agccgcgccaccagtggctccagtcttcccatgagcatcggcctccacaaacaggagtac
gaggtggatgccctgcagaggcgcttctctgggggcagccattactacggaggggagtcg
ccgcgcatatccccctgcaatagcatgggcaagctgagcaagtccgacgggcagctgtcc
tggacaatggacagtgggcagtgctcacgcaacaccagcagtgaggctctggacaccaca
gaccactacgacccggactacgacttcctgcaccaggacctgtccagcttggagcagatg
actcctgtgccagtgggagcgtgcctcagccccctgcctgagtcccacagcgagtcttcc
tgccctggccccggtccgccgctggcacaactccacttcagctccctccagggctgctcc
gtgacttccgccctgccgccccctgccctgccagaaaagaagcgcagaggtggcgcctgc
tcaggcttttccgacggctcctactcgggctcatcctggtgcgtttcctttgagcgccac
ccatcccagtacgacaacctcatggaggaggacctaccgcctgtgcccccctttcccctg
ttcacgcccgacatcttgcccctgtgccacaccgccggggggtttgtgtctgagttcagc
ggcagcgagacaacagatgtacctcagagtccaccgccactccctgagaagaagagccgt
cacatactgaagtacatgcagtttgtggaagactactcagagccccagccctcagttttc
taccagatgccacagagcaagagcatctatgagcaacgcaacaagcacttccaggaagtc
tacggcttcaatgactcgtttagcagcagcgactctgtccacgagcccctcccacccccg
gcactgccacccaaacagaggcagctgagcatggacctagcggccccgggcagtggcagc
cccgaccctgtgctggtggccaacggctctctggacagctctcttgctatcggtcttctc
actgactcttctttctctgacactcgtcaaacctctttgagcgaaagcgctaacgaggaa
ggcggggagggagagtacgttaatctgtacacatccagccaagccaacggagatgggctc
tcccgccgagactcgtctgccatagatgactcactggaggacactgcctcggagaaccca
ctgtgcaataacaaggacatgtccgatgaccgccgaagacaaaagtcgtctgaagatggg
cagagtagcgaggagacggatgagctttccctcatcgatcacatggagatcatgtcccgg
ttaacactaaagcaggagaacgatgacggtccagatgtccgagccggatcgggggatatt
ttattagtccacgccacagaaacggaccgcaaagatcttgtcttgtactgtgaggctttc
ctgacgacgtacagaacgttcataaccccagaggaccttatcaaaaagctgcactacaga
tacaccaggttttgtcactgcccagataccttcaagaagaaagtcagcaaaaacaccttc
tttgttcttgtccgtgtggtggacgagctgtgtctggtggagatgacggaggacatcctg
atgcagctgatggacttggtgttcaggctggtgtgtaacggtgagctgagcctggcccgc
gtcctccgcacaaacatcctggacaaggtggagcagaggaagctgctgcgctacacctac
tcgctcaaaccactggccgcaagaggtgtcgccgccagacctgggaccctgcacgacttc
cgaagtcatgagatcgccgaccagctaactctcctggatgcagagctcttctacaaaatt
gagatccctgaggtgttgctttgggctaaggagcagaacgaggagaagagtgccaacctc
acacagttcacagagcactttaacaacatgtcctactgggtacgctccataatcattctg
caagagaaagcccaggaccgagaaaagctcctcctcaaatttatcaaaataatgaagcac
ttacggaagctaaataatttcaactcatatttggcaatattatctgccttggattcagct
cccatccgaagactggagtggcagaaaacaacctcagagggcctagaggaatactgcacg
ttaatagacagctcctcgtcgttccgggtctaccgagcggcactggcagatgtggagccc
ccatgtataccatatctgggtcttatcctccaggacttgacctttgtccatctgggcaac
cctgatcaaatcaacgggaaggtcaacttctccaagcgctggcagcagttcaacatcctg
gacagcatgaggcgcttccagcaggtgcattatgatctgaaacacaacgacgatattgtc
tccttcttcaacgacttcagcgaccacctggcagaggaggctctgtgggagctgtctttg
aagatcaaacctcggaacattacgcggcgcaaaacagagcgcgaagaaaagacatag
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