Oncorhynchus tshawytscha (Chinook salmon): 112248251
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Entry
112248251 CDS
T05605
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112248251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112248251
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112248251
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Gene cluster
GFIT
Motif
Pfam:
SNF
NADH_dh_m_C1
Motif
Other DBs
NCBI-GeneID:
112248251
NCBI-ProteinID:
XP_024272892
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Position
LG04:complement(18156185..18181687)
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AA seq
510 aa
AA seq
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MAIFGGVPLFYMELALGQFHRTGAISIWKHICPIFKGIGYAICVISLYVSFYYNTIIAWA
LFYFYSSFASVLPWTNCDNAWNTENCTNYFLKDNVTWNNYSRSPAEEFYTRNVLEIHKSD
GLSNVGGVRWQLMLCLFLIFTIVYFSLWKGVKTSGKVVWVTATLPYVVLFILLIRGATLP
GAWKGVVFYLQPKWEKLFETSVWVDAAAQIFFSLGPGFGVLLALSSYNPFTNNCYRDAIV
TSLVNCLTSFMSGFVIFTMLGYMAEKRNVNVEDVARDKGPSLLFITYPEAIANMTGSTFF
AIIFFVMMITLGLDSTFGGLEAIITAVMDEYPEYLAHRRELFVLGLVVVCFLGSLSTLTN
GGAYVVKLLEEFGVGSSIIAVGFLEAIAVSWFYGITRFSNDIKSMLGYYPGLFWKVCWVA
ISPAFLAYIIVSSLLKPAPLQLFDYKYPDWSITVGYIIGASSFMWIPIYMVYKLVWTPGS
LKQRLAVCLRPERTIMPEIHTDSLNMSAVP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttttggaggggtgccactcttttacatggaactggcactgggacagttccac
agaactggtgccatatccatatggaaacacatatgccccatcttcaaaggcattgggtat
gcgatctgtgtcatctcgctctacgtctcattctactacaacaccatcatcgcctgggca
ctcttctacttctactcgtccttcgccagcgtcctgccctggaccaactgtgacaatgcc
tggaacactgaaaactgcaccaactacttcctgaaagacaacgtgacctggaataactac
tccaggtcacctgctgaggaattttacacgaggaatgttctggaaatccacaagtccgat
gggctgagtaacgtggggggtgttcgctggcagctgatgctctgcctcttcctcatcttc
actatcgtttacttcagtctctggaagggagtgaagacatcagggaaggtagtgtgggtg
acagccaccttgccctatgtggtgctcttcatcctgttgatccgtggtgccaccctacca
ggtgcatggaagggagtggtcttctacctccagcccaagtgggagaaactcttcgagacc
agtgtgtgggtagatgctgcggctcagatcttcttctccctggggccaggctttggggta
ctccttgccctctccagctacaaccccttcaccaacaactgttatcgtgacgccatagtg
accagcctggtgaactgcctgaccagcttcatgtctgggtttgtgatcttcactatgctg
gggtacatggcagagaagagaaatgtgaatgtggaggatgtggccagagacaaaggtcca
agcctactcttcatcacatatccagaggccatagccaacatgacaggatcaacgttcttc
gccattatcttcttcgtgatgatgatcactcttgggcttgacagcacgttcggaggactg
gaggctatcattactgctgtgatggatgaataccctgaatacctggcacacagacgggag
ctgtttgtactgggcttggtcgttgtgtgctttttgggctccctcagcactcttaccaat
ggtggggcctatgtggtgaaactgctggaggaatttggggtgggttcctccatcattgct
gttggttttcttgaggccatcgctgtttcctggttctatggtatcacaagattcagcaat
gacattaaatccatgttaggctattatcctggattattctggaaggtgtgctgggtggct
attagtcctgcatttctagcgtatataatagtgagctccctgctcaagccagcgcccctc
caactctttgactacaagtacccagactggagcattacggtgggctacatcatcggtgcc
tcgtccttcatgtggatccccatctatatggtctacaagctggtgtggacccccggatca
ctgaaacagcgcctagctgtgtgtctgagacctgagaggaccattatgccagagatccac
acagactccctcaacatgagtgctgtcccatag
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