Oncorhynchus tshawytscha (Chinook salmon): 112248261
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Entry
112248261 CDS
T05605
Symbol
cep78
Name
(RefSeq) centrosomal protein of 78 kDa isoform X1
KO
K16765
centrosomal protein CEP78
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112248261 (cep78)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112248261 (cep78)
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
112248261 (cep78)
Cilium and associated proteins [BR:
otw03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112248261 (cep78)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
Motif
Other DBs
NCBI-GeneID:
112248261
NCBI-ProteinID:
XP_024272909
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All DBs
Position
LG04:complement(18490337..18516850)
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AA seq
770 aa
AA seq
DB search
MLDTVQIRRRGAQDFEAYYDYACTMQDSVPLPAVKANLSQGMLDFNGDRLKLTDWTPILN
SLTINKQLQHVAVRSCYQSGLGIGETERYRAGNRKKIPAIRSKEMTFKLCKALRECLTAS
PNLKTLQLHGLPFRERDLITLTKGLAKSVSLENLSLAHCPIADEGLEAICQSVKYSPSIK
TVDFTGCNLTWRGAEHMANIIKHQAMRRHSAAWAESLRYRRPEFEGMGGLRRVTLNCNTL
VGDRGAAALAQELAEDLWVKALDLQKCGLSNDGTRSLLEALKSNSTLCVLDIRRNPLVDN
DLMKSVIERVLMNTNGQSSQYSWIKPPALKDSQKPPILKRRILGNTARGKATFRIGPRRL
SLAGRRSPVVAQQPHPCSSRCIPWRTAERAGRQRGLPPGNTVAEQSFEGAATVKVTMETE
SEEEGEEEAVETKSLSPLSLHERITVRQYRRVQVELEECRLRLAEERRARVKADTRLMEY
ELENARLRNINFSLSEALHAPATGPSSILEDDAVLDSIESSFGKFHAFLDLLKDAGLGQL
ASMAGIDQSDFGPPQLSSSVGQPLVGAGDQDTGDKVDAAPSGGDGPNAPSEGQPNGFIPG
APATLRGLGLEGEPQEVPPVPASELASVAKSGGENQQKDPSPSQLEGRQVSGTENSIHSN
GSHGNDSYAKGSHGNDSYAKGSLSNDSQGSGSYGKGSRGLNFSHQSNGKGSHGYSFNYSN
CSYSSIHSNSFHSNSSVRSSLSDMSERLESVGSLGSKAFGEGRVGSGAQR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttggacacagtccaaattcggcgcagaggtgcccaagatttcgaggcatattatgat
tatgcatgcactatgcaggactcagtcccattgccagcagtcaaggcaaacctgagtcaa
gggatgcttgactttaacggggatcggctcaaactgacagactggacacccatactcaac
tctctgaccatcaataaacagctacaacatgttgcagtcagaagctgctaccaaagtggt
ctcggcatcggagagacagaaaggtacagggctggcaataggaagaagattccagccatt
cgctccaaggagatgacgttcaaactgtgtaaagcactcagggagtgtctgacagcttca
ccaaacctcaagaccctccaactccatggtcttccatttagagagagagaccttatcact
cttaccaagggtttagccaaaagtgtctctttggaaaatctctctttggctcattgtcct
atagcagacgaggggttagaagctatctgccagagtgtgaagtactctccatctataaag
acagtggatttcacaggctgcaatctgacctggagaggagcggagcatatggccaacatc
atcaagcatcaggcaatgcggaggcacagtgcagcctgggccgaatctctgaggtatagg
aggcctgaattcgagggcatgggaggcctccgccgggtcactctcaactgcaacaccctg
gtgggagacagaggggcggccgccctcgcacaggaactggctgaggacctctgggtcaaa
gccttggatctgcagaagtgtggtttgtccaacgatgggacacggtctctgctggaggct
ctaaagtccaactctactctctgtgtcctggatatcaggaggaaccccttggtggacaac
gacctgatgaagtccgtgatcgaaagagttctcatgaacactaatggtcaatcctctcag
tactcatggatcaagcccccagccctcaaagactcacagaaacctccaatccttaagaga
agaatactgggaaatacagctagaggaaaagcaacatttaggataggtcctcgcaggttg
tcgttggccggcaggcggagtccagttgttgcccagcagccacacccctgctccagcagg
tgtatcccatggcgcactgcagaacgtgctggacgacagagaggacttcctccaggtaat
acagtggcagagcagagctttgagggggctgccactgtcaaggtgacaatggagactgag
tcagaggaggagggagaggaggaagcggttgagacaaaaagtctgtcaccacttagtctt
catgagaggatcactgtcagacagtacagacgtgtacaggtggagctggaggagtgtcgg
ctcagactagcagaggaaaggagggccagagtgaaggcagacactcgtctcatggagtat
gagttggagaatgctcggctgcgcaatatcaacttctccctgtcggaggcactgcatgct
cctgctactggcccctccagtattctggaggacgatgcggttctggacagcatcgagagc
tccttcggcaagttccacgccttcctggacctgctcaaggatgctggactgggccagttg
gcctccatggcagggattgaccagtccgattttggcccaccccagctgtcctccagtgtt
ggacagcctcttgttggggcaggggaccaagacacgggagataaggttgatgcggcacct
tctggaggcgacggccccaatgctccgtcagagggccagcccaatggattcatccccgga
gctccagccaccctcagagggttagggttagagggtgaaccacaggaagtgccccccgtc
cctgctagtgagttagccagtgtggcgaaatctggtggagagaatcagcagaaggatccc
tcgccctcacaactggaggggcgacaggtgtcagggactgagaacagtatccatagcaat
ggctcccatggaaatgactcgtatgccaaaggctcccatggaaatgactcgtatgccaaa
ggctcccttagcaatgactctcagggtagcggttcctatggcaaaggttcccgtggtcta
aatttctctcaccaaagtaacggcaaaggctcacatggttacagttttaattacagcaac
tgctcctacagctccatccacagcaacagcttccatagtaacagctctgtaaggtccagt
ctgagtgacatgagtgagcgtttggaatctgttgggtcattggggtcaaaggcttttgga
gaaggcagggtagggtcaggagctcagaggtga
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