Oncorhynchus tshawytscha (Chinook salmon): 112248349
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Entry
112248349 CDS
T05605
Name
(RefSeq) small nuclear ribonucleoprotein Sm D3
KO
K11088
small nuclear ribonucleoprotein D3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112248349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112248349
03041 Spliceosome [BR:
otw03041
]
112248349
03032 DNA replication proteins [BR:
otw03032
]
112248349
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
112248349
Spliceosome [BR:
otw03041
]
Complex A
U1 snRNP components
Sm proteins
112248349
U2 snRNP components
112248349
Complex B
U1 snRNP components
112248349
U4/U6.U5 tri-snRNP components
112248349
Complex C
U2 snRNP components
112248349
DNA replication proteins [BR:
otw03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
112248349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Kringle
Motif
Other DBs
NCBI-GeneID:
112248349
NCBI-ProteinID:
XP_024273061
UniProt:
A0A8C8EMX3
LinkDB
All DBs
Position
LG04:complement(23128091..23129540)
Genome browser
AA seq
127 aa
AA seq
DB search
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMANITVTHRDGRVAQLEQ
VYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGAGAGRGKAAILKAQVAARGRGRGGMGRG
NIFPKRR
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtccattggagtgccaatcaaagtccttcatgaagctgagggccacatcgttacctgc
gagaccaacaccggggaggtgtaccgggggaaactcattgaagctgaggacaacatgaac
tgccagatggccaacatcacagtgactcacagagacggccgtgtagcccagctggagcaa
gtgtacatccgaggcagcaagattcgattccttattctaccagacatgctgaagaatgca
ccaatgctaaagagtatgaagaacaagaaccagggagctggagctgggagaggcaaagct
gccattctcaaagcacaagtggctgctaggggtcgaggacgtggagggatgggaagagga
aatatattcccgaaaaggcgataa
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