Oncorhynchus tshawytscha (Chinook salmon): 112248363
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Entry
112248363 CDS
T05605
Name
(RefSeq) nuclear receptor corepressor 2 isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112248363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112248363
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
112248363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
DUF4820
DUF4518
Motif
Other DBs
NCBI-GeneID:
112248363
NCBI-ProteinID:
XP_042176443
LinkDB
All DBs
Position
LG04:complement(24646707..24842145)
Genome browser
AA seq
2488 aa
AA seq
DB search
MSSHPQSVPQGRRAVDIRHLPNPASLPLQLARAHTDVGLVDYHPHSRDYSSHLAQPHRRR
PSLLSEFQPGNERGQEQHIRYEHIYLPEPNNQSEVEYVEIKRPRLDLGAESLMRHSSHRP
QLPLGGAEDMSKDRGSSMGKLEPISPVSPAQMDPDLDLVPARFSKEELIQNMDRVDREIT
MVEQQICKLRKKQVQQQLEEEAAKPQEPERSMISPPPSEAKHRSLVQIIYDENRKKAEEA
HRILEGLGPRVELPLYNQPSDTKQYHDNIKINQAMRKKLIVYFKRRNHARKQWEQKFCQR
YDHLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSSRAGQRGGG
LASSAARSEHEVSEIVDGISEQENTEKQMRQLAVIPPMLFDAEQQRIKFINMNGLMDDPM
KVYKDRQVMNMWSEQEKDTFREKFIQHPKNFGLIASFLERKTVAECVLFYYLTKKNENYK
NIVRRNYRRRGRSQHGQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVNRSSQEDKEEK
EKEKEGEREEEKTEGEEREDVMKDDTSGEDGEDKEPTVALKGRRTANSQGRRKGRITRSM
TSEVEETATPPLSGELANLEMNESSRWTEEEMETAKKGLLQYGRNWSAIAKMVGSKTVSQ
CKNFYFNYKKRQKLDEILQQHKMKSERERKARRKGKALQSEEASAPSAAEEEEMEGSGAS
GNEEAAPEDGEGGANNSSDTESLPSPRSSEDSKPKEEGSGRSKAGSNSGDKEASGSHMGQ
RGDEKPPGEVGKAIKQEVKTEAEEGSKEQPSESTDRDMKPPTADAEESKSSSKSSKRDHG
PKTGSHADSDSSATCSADELEELNSTEKNRMTSPSRPSLLNYAHDGVISSPLQKPMDLKQ
LKQRAAAIPPIMPQMPDGGPRGGCSKAELPPHALALYQQQITMAHGESSQEAKQHAGQPS
KQHPYPAQGDPHNISSPRVHPRSPSASDKDELEGNERWLQTLLHGLHKSRAFSPHGDTKK
QPVGPEDLRATTLGRPIMSPYPMSHRDMAKLSHDQHLLHYNSSFQQAGHSGPPGLQQDGA
RLAAVLPLHMPEPPPLISSNKPGGSITQGTPVQLHSPAHGMDHGKMPPVQMGLSWMDQRK
VGESKCLEWVQHSQPWFAGPYPVVKQEQLSPRCPSSLAENLSTQGMPHDANAGRGSLPAV
QGGSITKGIPGTRVHQDSPISYRGGSITQGTPADVLYKGTITRLITEDSPSRAERERDEL
LSKGHVVYEGISGHILTYDRPPSQTPKDDGRGQPGEILGLKRPYDVRGLPMRETLSAANC
EGLIGRAISHERDNPHPTHHIRGSISQGIPRHLDIQDGYMRREAKQMKREGSPSQGTGQM
AEPMKGREAIVPTVKEGGRSIHLIPREELRLMPEGMMPKAGKEGIIIQGTPMKQEQGSSR
KGHDVRSIIASSPRSHYSMPSHLEMRGPEQRGRYEEGPKSRPSAVVNTASSMARSSPLAM
GGEQGGKAHHSPVGYEEHKGGIRAPYPGPSHRGSPLSGQRQHEGSNKNQPQERKATPTPR
EMSSGKSPLPGVAEQQAQQQQASLASYERLLQGLGADVYRGQIPLSFDPASLRQGIPIDP
AYYLPRHLAPNPGYPHPYPYLIRGFPDTAALENRQTLLNDYITSQQMHQWPAAAAMAAQR
SDLLRGLSPRDQPLQMPYSAAPRGIIDLSQVPHLPVLVPPSAGSSGSPMDRITYIPGGQG
GFPTRPYNTSPISPVGPQHMSKQHGTPSTDRERERDRERERDRERERDRERERDRERERD
RERERDRERERDRERDREQERERDRERQRDRERDRDREKGISHGNVEHAPIWRPGTEHSS
GGSSSVRPHSGYSHQHSPVSPRTQDNVQQRPSVLHNTGGKSLPVSDHNNPSVLRSMPGSN
RYPGYSHLQRTGMPTEGYPPSMDPKEMGRDGGKSRGGLPKHTQDQHGPSISSSKSDPKLA
NPNQGGYPVPYPQGSAASYHSGRPPPHLLPPQSDSHVGRGESGTPSREKTQNKPMSVQEQ
ELRSLGKTTMTAANFINAIIMRQISCETGMPETGSLVANSASDAQQKMMPMEQHGPYRPP
SEERLSPGQQSPLMKGSQRVVTLAQHISEVITKDYTRQSQQAQQQSYHSNPVLDLTRPLS
APHALPASQESSQGPRYTPERTGRERTRDGSPQPKASPVSMSADGIEPVSPAGAMSEPDT
QGASYPNEQGEQGMGSRSPPNTQPPAFFSKLTESTSAIVKSKKQEMIKKMTVVGSETDFN
TGQPGTEIFNMPASTTAGPVSIRSHPAPEASGNTIGLEAIIRKALMGKYDDQAEERPPSS
NAINSMAASVPAANPLADGRAEDSYSLQGGGGKPKGSGRSNGRKAKSPGPGLSGGERPSS
VSSVHSEGDTNRRTPLINRVWEDRPSSTGPTPFPCNPLTMRFPGGMPVAAPSPSSGQLGV
QGLGQGRAWEEEPKPLLCSQYETLSDSE
NT seq
7467 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccacccccagtctgtgcctcagggccggagggctgtggacatccgccacctg
ccaaaccctgccagtctaccgctgcagttggcacgggcacacacggatgtgggactggtg
gactaccaccctcactctcgggactacagctcacacctggctcagccccaccgccgccgg
ccctctctgctgtctgagttccagccagggaatgagcgaggtcaggagcaacacatccgc
tatgagcacatctacttacctgagcccaacaaccaatcagaggtggagtatgttgagatc
aagcgtccccgcctggaccttggggcggagtctctcatgaggcactcatcccaccgccca
caacttcctctgggaggggctgaggacatgtcaaaggaccggggcagctccatggggaag
ctggagcccatctcccccgtcagcccggcccagatggacccagatctggacctggtgcca
gcccgcttctccaaggaggagctcatccagaacatggaccgtgttgaccgggagatcacc
atggtggagcagcagatttgcaagctacgcaagaaacaggtacagcaacagctggaggag
gaggcagcgaagccccaggagccggaacggtctatgatctcccccccgcccagtgaggcc
aagcaccgcagcctggtgcagatcatctatgacgagaacaggaaaaaggcagaggaagcg
cacaggattctggaaggactgggaccccgagtagaactgcctctgtacaaccagccatct
gacaccaagcagtaccatgacaacatcaaaataaaccaggcgatgaggaagaaactcatt
gtttacttcaagaggagaaaccatgctcgtaagcagtgggaacagaagttctgccagcgc
tatgaccatctgatggaggcctgggagaagaaggtggagcgcattgagaacaacccccgg
cgccgggctaaggagagtaaggtgcgagagtactacgagaaacagttccctgagatccgc
aagcagagagagctgcaggagcgcatgcagagcagccgggcggggcagcgtggaggagga
ctggcctcatctgcagcccgcagtgaacacgaggtctctgagatcgttgacggcatatca
gagcaagagaacaccgagaagcaaatgcgccagcttgcggtcatccctcccatgttgttt
gacgccgagcagcagcgcatcaagttcatcaacatgaacggtctgatggacgaccccatg
aaggtgtacaaggaccggcaggtcatgaacatgtggagcgaacaggagaaggacaccttc
cgcgagaagttcatccagcacccaaaaaactttggcctgattgcttcttttctggagaga
aagacggtggcagaatgtgtcctcttctactacttgaccaaaaagaacgagaactacaag
aacattgtgcgcaggaactaccggcgccgtggcaggagccagcatggccaacaacagcag
caacaacagcagcaacagcaacaacaacaacaacaacaacagcagcaacaacagcagcag
caacaacagcaacaacaacaacaagtgaaccgaagcagccaggaggacaaggaggagaag
gagaaagagaaggagggagagagggaggaggagaagactgagggggaagaaagggaggat
gtaatgaaggacgatacctctggtgaggacggggaagacaaagagcccacggtggcctta
aaaggtcgacgcacggctaacagccagggccggcgcaagggccgcatcacccgctccatg
accagcgaggtggaggagaccgccacgccgccgctcagcggtgaactcgccaatctggag
atgaatgagagctctcgctggactgaggaggagatggaaaccgccaaaaaaggtcttctc
cagtatggtaggaattggtcagccatcgccaagatggtgggctccaaaactgtgtcccag
tgcaagaatttctacttcaactataagaagaggcagaaactcgacgagattctgcagcag
cataaaatgaaatcggagagagagcgtaaggcgcggcgtaaaggcaaagctctacaaagt
gaagaggccagtgccccgtctgctgccgaggaggaggagatggagggctccggggccagc
ggcaacgaggaggcggcccccgaggatggagaaggtggtgctaacaacagctctgacaca
gagagcctgccctctccgcgttcctctgaggacagcaagcctaaagaggagggtagtggc
aggtccaaagctggctcaaactctggggacaaggaggcctcaggttcccacatgggccag
cgaggagatgagaaacccccaggagaagtggggaaggccatcaagcaggaggtgaagaca
gaggcagaggagggcagcaaggagcagccaagtgaatccacagaccgagacatgaagccc
cccactgcagatgcagaggagagcaagagctcatccaagagctccaagagggaccatggg
cccaagacgggctcccacgcagacagtgactctagtgccacctgcagcgcggacgagttg
gaggagttgaatagtacagagaagaacaggatgacgtctcccagccgtcccagcctgctg
aactatgctcatgatggggtcatctcctcccccctgcaaaagcccatggacctgaagcag
ctcaaacagagggctgctgccatcccccctattatgccccagatgccggatggtggacct
cggggtgggtgtagtaaggctgagctgcccccccatgccctggctctctaccagcagcag
atcaccatggctcatggagagtcctcccaggaggccaagcagcatgcaggtcagcccagc
aaacagcacccctacccagcgcagggggacccccataacatcagcagcccccgagtccac
ccacgcagcccctccgccagcgacaaggacgagctggaaggcaacgagaggtggctgcag
actctacttcacggattacataagtcccgggccttctctcctcatggtgacactaagaag
cagccggtggggccagaggacctgagggccactaccctgggccggcccatcatgtccccc
tacccaatgtcccatcgagacatggccaagctcagccacgaccagcacctactccactat
aactcctctttccagcaggctggccactctgggccccctggtctgcagcaggatggtgcc
agattggcagcggtgctccccctccatatgccagagccaccccctctcatctcctccaac
aagccaggggggtctatcacacagggcaccccagtgcagctgcatagcccggctcatggg
atggaccatgggaagatgccccctgtacagatgggtttgtcctggatggatcagaggaaa
gtgggtgagtccaagtgtctggagtgggtgcagcactcccagccttggtttgctggtccc
tacccggtggtgaagcaggagcagctttctccgcggtgcccgtcatccctggcagagaac
ctgtccacgcaggggatgccacatgacgccaatgctggacgtgggtctttgccagcagtg
caggggggcagcatcacaaagggcatcccagggaccagagtgcaccaggactcccccatc
tcctaccggggaggctccatcacccagggcaccccggcagatgtgctgtacaaggggacc
ataacccgtctgatcacagaggatagccccagcagagcagagagggagcgggatgagctc
ctgtccaaaggacacgtggtctatgagggcatcagtggacacatcctcacctatgaccgc
ccaccctctcagacccctaaagatgacggccggggccagcctggggagatcttggggctg
aagcgcccctatgatgtcagggggttgcccatgagggagacactgtctgcagctaactgt
gagggtctgataggcagagccatatctcacgagagagacaacccacacccaacccaccac
atccgtggttccatttcacagggtatcccccgtcacctggacatccaggatggctacatg
aggcgggaggccaagcagatgaagagagagggctccccgtcccaagggactggccaaatg
gctgaacccatgaagggtcgagaggccattgtgcccacagtgaaggaggggggccgatcc
atccacctcatccccagagaggagctccgactgatgcccgaaggcatgatgcccaaggct
ggcaaagagggcatcataatacagggcactcctatgaagcaggagcagggtagctcaagg
aaggggcacgatgttcgttccataatcgccagctccccacgctcccactacagcatgccc
tcccacctggagatgcggggacctgagcagcggggccgctacgaggagggtcctaagagc
cgtcccagcgctgtggtcaacacggccagctccatggctcgatcctcgcccctggcaatg
gggggtgagcagggtggcaaggctcaccacagccctgtgggctacgaggaacacaagggt
ggcataagggctccctaccctggaccttctcaccgaggatctcccctgtcaggccagcgg
cagcatgaaggctccaataagaaccagcctcaggagcgcaaggccacacccactcctcgg
gagatgagctctggcaagtcacccctgccgggcgttgccgagcagcaggcccaacaacaa
caggcgtccctggcgtcgtacgagcgtctgctgcagggtctgggggccgacgtgtaccga
ggacagatccccctatccttcgatcctgcctccctgcgtcagggcatccccatcgaccca
gcctactacctgcctcgccacctggcccctaaccctggctaccctcacccttacccctac
ctgatccggggcttccccgacacggcagccctggagaaccgccagacgctgctcaacgac
tacatcacctcccagcagatgcaccagtggcctgcagccgccgctatggctgcccagcgc
tcagacctgctgagagggctctcgccacgggatcagcccctacaaatgccctactctgct
gccccacgcgggatcatcgatctgtctcaggtgccacacttacctgtcctagtccctccc
tctgcagggtcttccggctcccccatggaccgcatcacttacatccccgggggccaggga
ggcttccccacccggccttacaacacctcccccatctcaccagttgggccccaacacatg
agcaagcagcacggcacaccatctactgaccgcgagagagagagggaccgcgagagagag
agggaccgcgagagagagagggaccgcgagagagagagggaccgcgagagagagagggac
cgcgagagagagagggaccgcgagagagagagagaccgcgagagagacagggagcaggag
agagagagggatcgtgagagacagcgagacagagagcgggaccgggacagagagaaaggg
atctctcatggcaacgtggaacatgcccccatctggagaccaggcacagagcacagctcc
ggtggtagcagcagtgtcaggccccactccggctacagccaccagcactccccggtgtcc
cctcgtacccaggacaatgtccagcagaggcccagcgtcctgcacaacactgggggcaaa
agtctgcctgtcagtgaccacaacaacccttctgtgctaaggtccatgccaggctccaat
cgctacccaggctacagccacctccagaggaccgggatgcctactgagggctacccacca
agcatggaccccaaggaaatgggccgggatggtggcaagagcaggggaggccttcctaaa
cacacccaggaccaacatgggccctctatatcctccagcaaatctgaccccaagctggcc
aaccctaaccaagggggttaccccgtgccctaccctcagggctctgcagcctcttaccac
tcaggccggcccccacctcacctgctgcccccccagtcggatagccatgttggccgcgga
gaaagtggcacgcctagtagggaaaagactcaaaacaaaccgatgtccgttcaggaacaa
gagctccgatcactcggtaagaccaccatgactgcggccaacttcataaacgcgattatc
atgcgtcaaatttcttgtgaaacggggatgccagagacgggctcgctcgtggccaacagc
gccagtgatgctcaacaaaagatgatgcccatggagcagcacggtccataccggcctccc
tccgaggagaggctgtccccgggccagcaatcccccctgatgaaaggcagccagagggtg
gtcaccctggcgcagcacatcagtgaggtgatcaccaaggactatacccggcagagccaa
caggcccagcagcagtcctaccacagcaacccagtcctggacctaacccggcccctcagc
gctccccatgccctgcctgcctcccaggagtctagccagggacctcgctacactccagag
aggacaggaagggaacgtacccgagatgggtctcctcagcccaaggcatcacctgtcagt
atgtctgcagacggcattgagccagtgtcccctgcaggagctatgtctgaaccagataca
caaggggcctcctaccccaacgagcagggagagcagggcatgggctctcgctcccctccc
aacacccagcccccagccttctttagcaagctcactgagagcacctcggccattgtcaag
tccaagaaacaggagatgatcaagaagatgaccgtggtcggcagtgaaactgatttcaat
actggccagccaggaacagagattttcaacatgcctgcctctaccacggcaggacctgta
agtatccgcagccacccggctcctgaggcgtccggtaacaccatagggctggaagccatt
atcagaaaggccctgatgggcaagtatgatgaccaggccgaggagcgccctccctcctcc
aatgctattaactccatggctgccagtgtgcctgccgctaatcctctcgctgacggacgg
gccgaggactcttactcactacaaggtgggggggggaagccaaagggtagcgggcgctct
aacgggcggaaggccaaatcccccgggccgggcctgtcagggggggagagaccctcctct
gtgtcctctgtccactctgagggggataccaaccgccgcacgcccctcatcaaccgtgtc
tgggaggaccggccctcctccacaggccccactcccttcccatgtaaccccctgaccatg
cgtttccccggtggcatgccagttgcagcgccctccccctcctctggccagctaggggtc
cagggtctggggcaggggcgggcctgggaggaggaacctaagcccctgttgtgttctcag
tacgagaccttgtctgacagcgagtga
DBGET
integrated database retrieval system
