Oncorhynchus tshawytscha (Chinook salmon): 112248365
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Entry
112248365 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
112248365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112248365
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112248365
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112248365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-rbx1
WWE_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_Vps41
zf-ANAPC11
zf-RING_5
zf_RING_Vps8
PHD_NSD
zf-UDP
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
112248365
NCBI-ProteinID:
XP_024273091
LinkDB
All DBs
Position
LG04:complement(24456801..24515668)
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AA seq
646 aa
AA seq
DB search
MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYNVTTCHHIENVLKGDARGTV
VLGQVDAQLAPYVIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCPCQQCILVNSTRAASNAILASQHRKLYGGVTGPSGATGTL
TVVRQSNTFAGTTLWSPTSSAGTNNIQHNNISAGGGQAKAEQVQSLLSSANFPCSPALPS
LPPAHGHSHAHGHHAIINGQNNLNRPGTQHISIGTARGAIPPGVPPLPVKNLTVSGPVHP
AIAGITGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGICRKTKKKHLRRGKN
PEDVVRRYTEKVKVAPDEDCTICRERLVMSSGYEGVKGIKPEVVGKLGKCGHMYHLLCLV
AMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMEYHVIPHCLPGYPEAKTIRIVYDIPAG
LQTTEHPNPGKKFSARGFPRHCYLPDNNKGRRVLKLLIMAWDRRLIFTIGTSSTTGESDT
VVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVGQDNLKD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcacggccaggctctggggtgctggtgtcagtcaacgggctggggtacccccctcag
aacctggcccgggtggtggtgtgggagtggctgaatgaacatgggcgctggcggccctac
aacgtgacaacttgccaccacatagagaacgtactgaagggggatgcgcgggggactgtg
gtccttggacaggtggatgcccagcttgccccttacgtcatagacctgcagtccatgcac
cagttcagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtcg
tcggccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggcttctgctacctcattgacttcaacagcatggtccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctagcctaccctctcatc
atgggctccatccccaagtcccagtcttggcccgtgggagccagctccggccagccctgc
ccctgccagcagtgcatcctggtcaacagcacgcgggctgcctcaaatgccatcctggcc
tctcagcaccgtaagctgtatgggggggttaccgggccttcgggggctacaggcacgctc
accgtggtacggcagagtaacaccttcgctggaaccaccctctggtcccccacctctagt
gctgggaccaataatatacaacataacaacataagcgcaggaggaggccaagccaaagct
gaacaggtgcagtctctcctgtctagtgccaactttccatgttccccggcgctgccgtcc
cttccgcctgcacatggccactcccacgcccacggtcaccatgccatcatcaatgggcag
aacaacctgaaccggccgggcacccagcacatttccataggcactgccagaggagccatc
ccaccaggggtccctcccctccctgttaagaaccttactgtctctggaccagttcaccca
gcaattgcaggtattaccggtatcctgatgtgtgcggctggcctgcctgtgtgtctgacc
agggcccctaaacccattctgcacccgccgcccataaacaagagtgacatgaagcctgtg
cctggggtcaacggcatctgccgcaagaccaagaagaagcacctcaggagagggaaaaac
ccagaggatgtggtgcggcgatacacagagaaagtgaaagtagcccctgatgaggactgc
accatctgcagggagaggctggtgatgtcatcaggctacgagggtgtcaagggcataaag
ccagaggtggtgggcaaacttggcaaatgtgggcacatgtaccatctgctgtgcctggtt
gccatgtacaacaatggcaacaaggatggcagtctgcagtgccccacttgtaaggctatc
tatggggagaagacaggcacacagccccctgggaagatggagtaccatgtcatcccccac
tgcctgcccggctatccagaggccaagaccatccgcatcgtctatgacattcctgctggc
ctacagaccacagagcatcccaacccagggaagaagttcagcgctagggggttcccccgg
cactgctacctcccagacaataacaaaggcaggagggtcctgaagctcctgatcatggca
tgggaccgccgcctcatcttcaccatcggcacgtccagcaccacgggagagtcagacaca
gtggtgtggaatgagatccaccacaagacagagtttggctccaacctgacggggcacggc
tacccagaccccaactacctggacaacgttctgacagagctgtcagcccaaggggtggga
caggacaacctgaaggactga
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integrated database retrieval system
