Oncorhynchus tshawytscha (Chinook salmon): 112248382
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Entry
112248382 CDS
T05605
Name
(RefSeq) calcium-binding protein 1 isoform X1
KO
K23531
calcium-binding protein 1/2/4/5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112248382
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112248382
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112248382
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
EF-hand domain-containing proteins
Calcium binding proteins
112248382
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
AIF-1
EF-hand_9
DUF5580_M
SPARC_Ca_bdg
DIMCO_N
EF-hand_4
Dockerin_1
POTRA_2
Motif
Other DBs
NCBI-GeneID:
112248382
NCBI-ProteinID:
XP_024273111
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Position
LG04:complement(24051527..24072965)
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AA seq
386 aa
AA seq
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MSSSFPKSESKTSLLKSSSASGRSTHFPERTTGTDRNHHHHHHRPAASQVSSNAAEESFW
SAECDVTARRPLCHPSLLGTRNRATTRASKSQPHAPHGNVPAAHSQDDPSEQHGVVRGVR
ERCKSSKHHRHHRKTTRDDQPAAQHHSHTHPTRLDPRIGMQPHSDCKDDTALLFESRDHT
RASSSASVDASIPSPASSSPIPVSSRSSHRSRRSSAASCESDFLRPILNSVFGQDRDLRP
EEIDELRDAFKEFDKDKDGFISCKDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFE
DFVELMGPKLLAETADMIGVKELRDAFKEFDTNGDGAISTSELREAMRKLLGQQVGHKDL
EDILRDIDLNGDGHVDFEEFVRMMSR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctcttttcccaaatccgaatccaagacctcattgctgaaatcttcctcggca
agcggaagatcgacacacttccctgaacgtacgacaggaaccgaccgaaatcatcatcat
catcaccaccgtccagctgcaagtcaagtgagcagcaatgccgcagaggagtctttctgg
tcggcagagtgcgacgttactgcgaggagacccctgtgccacccctcgctcctcggtacc
cggaatagggcgacgacccgagctagtaagagccagccccacgccccacatggcaacgtt
cccgccgcccactcccaggatgacccatctgagcaacatggtgtggttcgaggtgtgaga
gaacgctgcaagtcatccaagcatcaccgacaccaccggaaaacgacccgggacgaccag
ccagctgcacaacaccacagccacactcaccctacccgtttagaccccagaataggcatg
cagccccactcagactgcaaagacgacaccgcgctcttgtttgaatcgagggaccataca
agggccagttcgtctgctagcgtggatgccagcatcccgtccccagcttcctcctcgcct
atccccgtatccagccgatcctctcaccgctctcgaaggtccagcgcagcatcttgtgaa
tctgactttttgcggccaattctcaactcggtttttggacaggacagagacctgaggcca
gaggagattgatgagttgcgggatgcttttaaggagtttgataaggacaaagatggtttc
atcagctgtaaagacctgggaaactgtatgagaaccatgggatacatgcctactgaaatg
gagttgatagaactgagccaacagatcaacatgaatttgggaggtcatgttgactttgag
gattttgtggagttgatgggccccaaacttcttgctgaaactgcagatatgattggtgta
aaagaactgagagatgccttcaaagagtttgacaccaatggtgatggagcgataagcaca
tctgagctgagagaagccatgaggaagttgctgggacaacaggttggccacaaggactta
gaagatatcctgagggacatcgacttgaatggtgatgggcatgttgactttgaagagttt
gtacgaatgatgtcccgctga
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