Oncorhynchus tshawytscha (Chinook salmon): 112248383
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Entry
112248383 CDS
T05605
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00601
Glycosphingolipid biosynthesis - lacto and neolacto series
otw01100
Metabolic pathways
Module
otw_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
otw_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
112248383
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112248383
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
112248383
Glycosyltransferases [BR:
otw01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
112248383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
B3GALT2_N
Motif
Other DBs
NCBI-GeneID:
112248383
NCBI-ProteinID:
XP_024273115
UniProt:
A0AAZ3NY54
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Position
LG01:complement(25116013..25126172)
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AA seq
379 aa
AA seq
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MFLNFRRIRKCQCVQLVTTCFVLSVLMVCWEQLDHHVVSHMKSYSYRYLVNSYDFINKSF
GISQREAKSQSNFPYLINHHDKCDSNEVLLLLFVKSSPENLERRQAIRATWGSEAYTQRE
LGATVRVVFALGVHPNPQQRGHVQRRLLGEDQVYGDLVQQDFVDTFHNLTIKLLLQFRWS
HNYCSQARFLMSADDDIFVHMPNLVHYLQGLIRQGAQDRWVGHVHRGAPPNRRKDSKYHV
PYEMYQWLSYPDYTAGAGYVVSGDVASKIYQATLSLNASLYIDDVFMGICANAMGVSPQE
HVYFSGEGKAPYHPCIYDKMITSHGHVADVRYLWKAATDPQIHDISSGLLGKMYCTAVKV
MLLCKPYYLNTYPCKAAFS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgaatttcagaaggatcagaaaatgtcaatgtgtgcagctggtgacgacgtgc
tttgtcctgtccgtgttgatggtgtgctgggagcagctggaccaccacgtggtgagccat
atgaagtcctactcctaccgctacctggtcaacagctacgacttcatcaacaagagcttt
ggcatcagccagagggaggctaagagccagagcaacttcccgtacctcatcaaccaccat
gacaaatgtgacagcaacgaagtgctgttgctgctgttcgtcaaatcttccccagagaac
ctggagaggaggcaggccatccgggccacctgggggagtgaggcctacacccagagggag
ttgggggccactgtgagggtggtgtttgccctgggggtccaccccaacccccagcagagg
ggccatgtacagaggaggctgctgggggaggaccaggtctatggggacctggtccagcag
gactttgtggacacctttcacaacctcaccatcaaactgctgctgcagttccgctggagc
cacaactactgcagccaagctcgtttcctcatgtcagccgacgacgacatctttgtccac
atgcccaacctggtgcactacctgcagggcctaatccgtcagggggcccaggaccgctgg
gtgggccacgtgcacaggggagccccacccaaccgccggaaggacagcaagtaccacgtg
ccttatgagatgtaccagtggctctcttacccagactacacagcgggggcagggtacgtt
gtctcaggggacgtggcttccaaaatctaccaggctactctgtccctcaatgcctcgctg
tacattgatgatgtgttcatgggcatctgtgccaacgccatgggggtgtctccccaggaa
catgtttacttttcaggggaagggaaggccccctatcacccctgtatctacgataagatg
atcacctctcacggacacgtggcagatgtccggtacctttggaaggcagcgacggacccc
cagatccatgacatttcctctggcctgttgggaaagatgtactgcacagcagtgaaagta
atgctcctctgtaaaccttattatttaaatacctacccatgcaaagcagcattttcatag
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