Oncorhynchus tshawytscha (Chinook salmon): 112248388
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Entry
112248388 CDS
T05605
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112248388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112248388
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
112248388
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
112248388
NCBI-ProteinID:
XP_024273119
LinkDB
All DBs
Position
LG04:complement(23968681..23993147)
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AA seq
373 aa
AA seq
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MEMERSQSSLSSTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDSVSAVTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKAYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVDKVCEIHFHEINNKMVE
CKKAQPKEVMSPMGSARGRSRVMPYGMDAFMLGIGMLGRGQHCFTQTQTHDCPFTIGYPG
FQAATYASRSYTGITPGYTYQFPEFHLERTPLLTSSHPPELTAIPLSAYGPMAAAAAAVA
RGSTPSRSGGFLGTSSPGPMADLYAAANQESAVSSYLSAASPSPSTGFGHSLGVRHSPYH
GPLIATAFTNGYH
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggagatggaaaggagccagagcagcctgtcatccacggactcccctcacgatccatgc
aaaatgttcataggcggtctcagctggcagacgacacaagagggattgaaagagtacttt
tgcaagtatggcgaggtgaaagagtgcatggtgatgcgggatccagttactaagcgctcg
aggggttttggatttgtcacttttgttgaccaggccggtgtggattcagtttcggcagta
accaggcatgagttggattcaaaaacaattgatccgaaagttgcgttcccgcgtagagcc
cagcccaagctagtgactcggaccaagaagatttttgttggaggtctgtccgtgaacacg
accatcgaggatgttaaggcgtatttcgaccagttcggaaaggttgatgatgccatgctc
atgtttgacaagaccaccaacagacacagaggatttggctttgtcacgtttgagaatgag
gacgtggtagataaagtgtgtgagatccacttccatgagataaataacaaaatggtggag
tgtaagaaggctcagcccaaggaagtgatgtcacccatgggctcggccagggggcgctct
cgggtgatgccctatggcatggacgctttcatgctgggtatcggcatgctgggcaggggg
cagcactgtttcactcaaacacagacccatgactgtcctttcaccataggttacccaggg
ttccaggcagctacatatgctagtcgaagttacactggcatcacccctggatatacctat
caattccctgaattccatttagagaggaccccccttctgacatcatcccacccccctgag
ctcacagccattcctctgtcggcatacggaccaatggcagcagcggcagcagcagtagct
agaggctccaccccctctcgttcaggagggttcctgggaaccagcagccctgggccaatg
gcagacttgtatgcagcagccaatcaggagtctgctgtcagcagctacctcagcgctgca
agcccctccccaagcactgggtttggccatagtctgggggtaagacacagcccttatcac
ggccctctgattgctacggctttcactaacggctatcactga
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integrated database retrieval system
